RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 EMILIN3Q9NT22 766 aa7.57□□□□□ -1.2
SGCB-203ENST00000514133 NEUROD2Q15784 382 aa7.56□□□□□ -1.2
SGCB-203ENST00000514133 SEMA3EO15041 775 aa7.55□□□□□ -1.2
SGCB-203ENST00000514133 PHF14O94880 888 aa7.55□□□□□ -1.2
SGCB-203ENST00000514133 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
SGCB-203ENST00000514133 ZDHHC16Q969W1 377 aa7.55□□□□□ -1.2
SGCB-203ENST00000514133 EPAS1Q99814 870 aa7.55□□□□□ -1.2
SGCB-203ENST00000514133 SLC24A3Q9HC58 644 aa7.54□□□□□ -1.2
SGCB-203ENST00000514133 PTPREP23469 700 aa7.53□□□□□ -1.2
SGCB-203ENST00000514133 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
SGCB-203ENST00000514133 MYT1LQ9UL68 1186 aa7.53□□□□□ -1.2
SGCB-203ENST00000514133 TESPA1A2RU30 521 aaPredicted RBP7.52□□□□□ -1.21
SGCB-203ENST00000514133 PDIA6Q15084 440 aa7.51□□□□□ -1.21
SGCB-203ENST00000514133 TYW1BQ6NUM6 668 aa7.51□□□□□ -1.21
SGCB-203ENST00000514133 ADGRD1Q6QNK2 874 aa7.51□□□□□ -1.21
SGCB-203ENST00000514133 POTEEQ6S8J3 1075 aa7.51□□□□□ -1.21
SGCB-203ENST00000514133 HOMEZQ8IX15 550 aa7.5□□□□□ -1.21
SGCB-203ENST00000514133 RNF166Q96A37 237 aaPredicted RBP7.5□□□□□ -1.21
SGCB-203ENST00000514133 DPYSL4O14531 572 aa7.49□□□□□ -1.21
SGCB-203ENST00000514133 ONECUT3O60422 494 aaPredicted RBP7.48□□□□□ -1.21
SGCB-203ENST00000514133 SMYD5Q6GMV2 418 aa7.48□□□□□ -1.21
SGCB-203ENST00000514133 STAC3Q96MF2 364 aa7.48□□□□□ -1.21
SGCB-203ENST00000514133 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
SGCB-203ENST00000514133 AXIN2Q9Y2T1 843 aa7.48□□□□□ -1.21
SGCB-203ENST00000514133 PCDHGA10Q9Y5H3 936 aa7.48□□□□□ -1.21
SGCB-203ENST00000514133 PPP1R3GB7ZBB8 358 aa7.47□□□□□ -1.21
SGCB-203ENST00000514133 HRO43593 1189 aa7.47□□□□□ -1.21
SGCB-203ENST00000514133 ZMYND10O75800 440 aa7.45□□□□□ -1.22
SGCB-203ENST00000514133 PSEN2P49810 448 aa7.45□□□□□ -1.22
SGCB-203ENST00000514133 CERKQ8TCT0 537 aa7.45□□□□□ -1.22
SGCB-203ENST00000514133 ADAM33Q9BZ11 813 aa7.45□□□□□ -1.22
SGCB-203ENST00000514133 DAXXQ9UER7 740 aaPredicted RBP7.45□□□□□ -1.22
SGCB-203ENST00000514133 VPS9D1Q9Y2B5 631 aa7.45□□□□□ -1.22
SGCB-203ENST00000514133 SUPT5HO00267 1087 aaKnown RBP7.44□□□□□ -1.22
SGCB-203ENST00000514133 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
SGCB-203ENST00000514133 ZBED2Q9BTP6 218 aa7.44□□□□□ -1.22
SGCB-203ENST00000514133 NBPF3Q9H094 633 aa7.44□□□□□ -1.22
SGCB-203ENST00000514133 BHMG1C9JSJ3 638 aaPredicted RBP7.42□□□□□ -1.22
SGCB-203ENST00000514133 C6orf132Q5T0Z8 1188 aa7.42□□□□□ -1.22
SGCB-203ENST00000514133 HCSTQ9UBK5 93 aa7.42□□□□□ -1.22
SGCB-203ENST00000514133 RABGEF1Q9UJ41 708 aa7.42□□□□□ -1.22
SGCB-203ENST00000514133 EN1Q05925 392 aaPredicted RBP7.41□□□□□ -1.22
SGCB-203ENST00000514133 LAPTM4BQ86VI4 370 aa7.41□□□□□ -1.22
SGCB-203ENST00000514133 BARGINQ6ZT62 677 aa7.39□□□□□ -1.23
SGCB-203ENST00000514133 KRI1Q8N9T8 703 aaKnown RBP7.39□□□□□ -1.23
SGCB-203ENST00000514133 RBM26Q5T8P6 1007 aaKnown RBP7.38□□□□□ -1.23
SGCB-203ENST00000514133 MRPL50Q8N5N7 158 aaKnown RBP7.38□□□□□ -1.23
SGCB-203ENST00000514133 DDX12PQ92771 950 aa7.38□□□□□ -1.23
SGCB-203ENST00000514133 GOLGA8CPA6NN73 597 aa7.37□□□□□ -1.23
SGCB-203ENST00000514133 GPIHBP1Q8IV16 184 aa7.37□□□□□ -1.23
SGCB-203ENST00000514133 AK7Q96M32 723 aa7.37□□□□□ -1.23
SGCB-203ENST00000514133 RBM27Q9P2N5 1060 aaKnown RBP7.37□□□□□ -1.23
SGCB-203ENST00000514133 MAP3K7O43318 606 aa7.36□□□□□ -1.23
SGCB-203ENST00000514133 GPBP1L1Q9HC44 474 aaPredicted RBP7.36□□□□□ -1.23
SGCB-203ENST00000514133 MLLT3P42568 568 aaPredicted RBP7.35□□□□□ -1.23
SGCB-203ENST00000514133 PACS2Q86VP3 889 aa7.35□□□□□ -1.23
SGCB-203ENST00000514133 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
SGCB-203ENST00000514133 TRIM6-TRIM34B2RNG4 842 aa7.34□□□□□ -1.23
SGCB-203ENST00000514133 COL9A1P20849 921 aa7.34□□□□□ -1.23
SGCB-203ENST00000514133 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
SGCB-203ENST00000514133 OSBPP22059 807 aa7.33□□□□□ -1.24
SGCB-203ENST00000514133 NYAP1Q6ZVC0 841 aa7.33□□□□□ -1.24
SGCB-203ENST00000514133 RBM33Q96EV2 1170 aaKnown RBP7.32□□□□□ -1.24
SGCB-203ENST00000514133 PRSS12P56730 875 aa7.31□□□□□ -1.24
SGCB-203ENST00000514133 FAM98CQ17RN3 349 aaKnown RBP7.31□□□□□ -1.24
SGCB-203ENST00000514133 ANKK1Q8NFD2 765 aa7.31□□□□□ -1.24
SGCB-203ENST00000514133 WNT2BQ93097 391 aa7.31□□□□□ -1.24
SGCB-203ENST00000514133 KDM4CQ9H3R0 1056 aa7.31□□□□□ -1.24
SGCB-203ENST00000514133 THSD4Q6ZMP0 1018 aa7.3□□□□□ -1.24
SGCB-203ENST00000514133 KCTD12Q96CX2 325 aaKnown RBP7.3□□□□□ -1.24
SGCB-203ENST00000514133 KIAA1468Q9P260 1216 aa7.3□□□□□ -1.24
SGCB-203ENST00000514133 PROX2Q3B8N5 592 aa7.29□□□□□ -1.24
SGCB-203ENST00000514133 CDCA7LQ96GN5 454 aa7.29□□□□□ -1.24
SGCB-203ENST00000514133 NBPF26B4DH59 902 aa7.28□□□□□ -1.24
SGCB-203ENST00000514133 TRIM66O15016 1216 aa7.28□□□□□ -1.24
SGCB-203ENST00000514133 PDE4DQ08499 809 aa7.28□□□□□ -1.24
SGCB-203ENST00000514133 TSR1Q2NL82 804 aaKnown RBP7.28□□□□□ -1.24
SGCB-203ENST00000514133 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
SGCB-203ENST00000514133 IFFO2Q5TF58 517 aa7.27□□□□□ -1.25
SGCB-203ENST00000514133 ZFRQ96KR1 1074 aaKnown RBP7.27□□□□□ -1.25
SGCB-203ENST00000514133 ZMYND15Q9H091 742 aa7.27□□□□□ -1.25
SGCB-203ENST00000514133 SOWAHBA6NEL2 793 aa7.26□□□□□ -1.25
SGCB-203ENST00000514133 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
SGCB-203ENST00000514133 TSKSQ9UJT2 592 aa7.25□□□□□ -1.25
SGCB-203ENST00000514133 TTC13Q8NBP0 860 aa7.24□□□□□ -1.25
SGCB-203ENST00000514133 TATDN2Q93075 761 aa7.23□□□□□ -1.25
SGCB-203ENST00000514133 LRCH3Q96II8 777 aa7.23□□□□□ -1.25
SGCB-203ENST00000514133 SLC4A3P48751 1232 aa7.22□□□□□ -1.25
SGCB-203ENST00000514133 PRIM1P49642 420 aaKnown RBP7.22□□□□□ -1.25
SGCB-203ENST00000514133 NPDC1Q9NQX5 325 aaPredicted RBP7.22□□□□□ -1.25
SGCB-203ENST00000514133 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
SGCB-203ENST00000514133 PLA2G2EQ9NZK7 142 aa7.22□□□□□ -1.25
SGCB-203ENST00000514133 UBTFP17480 764 aaKnown RBP7.21□□□□□ -1.26
SGCB-203ENST00000514133 PTPN5P54829 565 aa7.21□□□□□ -1.26
SGCB-203ENST00000514133 PTGDRQ13258 359 aa7.21□□□□□ -1.26
SGCB-203ENST00000514133 FAM117AQ9C073 453 aa7.21□□□□□ -1.26
SGCB-203ENST00000514133 RSPH6AQ9H0K4 717 aa7.21□□□□□ -1.26
SGCB-203ENST00000514133 TSR3Q9UJK0 312 aaKnown RBP7.21□□□□□ -1.26
SGCB-203ENST00000514133 FCHSD2O94868 740 aa7.2□□□□□ -1.26
SGCB-203ENST00000514133 NUTM2FA1L443 756 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms