RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 DAPK1P53355 1430 aa12.64□□□□□ -0.39
NEDD4-210ENST00000513957 CNTLNQ9NXG0 1405 aa12.63□□□□□ -0.39
NEDD4-210ENST00000513957 DUOX2Q9NRD8 1548 aa12.63□□□□□ -0.39
NEDD4-210ENST00000513957 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
NEDD4-210ENST00000513957 ZC3H13Q5T200 1668 aaKnown RBP12.62□□□□□ -0.39
NEDD4-210ENST00000513957 DHX29Q7Z478 1369 aaKnown RBP12.62□□□□□ -0.39
NEDD4-210ENST00000513957 ABCC5O15440 1437 aa12.62□□□□□ -0.39
NEDD4-210ENST00000513957 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
NEDD4-210ENST00000513957 ERBINQ96RT1 1412 aa12.6□□□□□ -0.39
NEDD4-210ENST00000513957 C3P01024 1663 aa12.6□□□□□ -0.39
NEDD4-210ENST00000513957 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
NEDD4-210ENST00000513957 CLTCQ00610 1675 aaKnown RBP12.58□□□□□ -0.4
NEDD4-210ENST00000513957 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
NEDD4-210ENST00000513957 DEPDC5O75140 1603 aa12.58□□□□□ -0.4
NEDD4-210ENST00000513957 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
NEDD4-210ENST00000513957 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
NEDD4-210ENST00000513957 ANKRD30AQ9BXX3 1397 aa12.57□□□□□ -0.4
NEDD4-210ENST00000513957 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
NEDD4-210ENST00000513957 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
NEDD4-210ENST00000513957 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
NEDD4-210ENST00000513957 MLECQ14165 292 aa12.55□□□□□ -0.4
NEDD4-210ENST00000513957 ROCK1Q13464 1354 aa12.55□□□□□ -0.4
NEDD4-210ENST00000513957 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
NEDD4-210ENST00000513957 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
NEDD4-210ENST00000513957 NPATQ14207 1427 aa12.54□□□□□ -0.4
NEDD4-210ENST00000513957 MROH1Q8NDA8 1641 aa12.53□□□□□ -0.4
NEDD4-210ENST00000513957 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
NEDD4-210ENST00000513957 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
NEDD4-210ENST00000513957 KIF3BO15066 747 aa12.5□□□□□ -0.41
NEDD4-210ENST00000513957 CAMSAP1Q5T5Y3 1602 aa12.5□□□□□ -0.41
NEDD4-210ENST00000513957 GCC2Q8IWJ2 1684 aa12.5□□□□□ -0.41
NEDD4-210ENST00000513957 CEP152O94986 1710 aa12.5□□□□□ -0.41
NEDD4-210ENST00000513957 UNC13BO14795 1591 aa12.49□□□□□ -0.41
NEDD4-210ENST00000513957 ABCC3O15438 1527 aa12.49□□□□□ -0.41
NEDD4-210ENST00000513957 LMTK3Q96Q04 1460 aa12.49□□□□□ -0.41
NEDD4-210ENST00000513957 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
NEDD4-210ENST00000513957 GGT6Q6P531 493 aa12.49□□□□□ -0.41
NEDD4-210ENST00000513957 VWDEQ8N2E2 1590 aa12.48□□□□□ -0.41
NEDD4-210ENST00000513957 PZPP20742 1482 aa12.48□□□□□ -0.41
NEDD4-210ENST00000513957 ANKRD50Q9ULJ7 1429 aa12.48□□□□□ -0.41
NEDD4-210ENST00000513957 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
NEDD4-210ENST00000513957 PTPRKQ15262 1439 aa12.47□□□□□ -0.41
NEDD4-210ENST00000513957 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
NEDD4-210ENST00000513957 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
NEDD4-210ENST00000513957 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
NEDD4-210ENST00000513957 KANK1Q14678 1352 aa12.45□□□□□ -0.42
NEDD4-210ENST00000513957 WASHC2CQ9Y4E1 1318 aa12.45□□□□□ -0.42
NEDD4-210ENST00000513957 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
NEDD4-210ENST00000513957 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
NEDD4-210ENST00000513957 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
NEDD4-210ENST00000513957 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
NEDD4-210ENST00000513957 TET3O43151 1660 aa12.44□□□□□ -0.42
NEDD4-210ENST00000513957 IQGAP3Q86VI3 1631 aa12.44□□□□□ -0.42
NEDD4-210ENST00000513957 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
NEDD4-210ENST00000513957 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
NEDD4-210ENST00000513957 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
NEDD4-210ENST00000513957 RPRD2Q5VT52 1461 aaKnown RBP12.42□□□□□ -0.42
NEDD4-210ENST00000513957 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
NEDD4-210ENST00000513957 NLRP1Q9C000 1473 aa12.41□□□□□ -0.42
NEDD4-210ENST00000513957 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
NEDD4-210ENST00000513957 CEBPAP49715 358 aaPredicted RBP12.41□□□□□ -0.42
NEDD4-210ENST00000513957 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
NEDD4-210ENST00000513957 ERVK-7P63135 1459 aa12.4□□□□□ -0.43
NEDD4-210ENST00000513957 A2ML1A8K2U0 1454 aa12.39□□□□□ -0.43
NEDD4-210ENST00000513957 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
NEDD4-210ENST00000513957 NAIPQ13075 1403 aa12.38□□□□□ -0.43
NEDD4-210ENST00000513957 TNRQ92752 1358 aa12.38□□□□□ -0.43
NEDD4-210ENST00000513957 PLA2R1Q13018 1463 aa12.38□□□□□ -0.43
NEDD4-210ENST00000513957 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
NEDD4-210ENST00000513957 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
NEDD4-210ENST00000513957 STRCQ7RTU9 1775 aa12.36□□□□□ -0.43
NEDD4-210ENST00000513957 ITGAEP38570 1179 aa12.36□□□□□ -0.43
NEDD4-210ENST00000513957 E9PCH4 1651 aa12.35□□□□□ -0.43
NEDD4-210ENST00000513957 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
NEDD4-210ENST00000513957 UGGT1Q9NYU2 1555 aa12.34□□□□□ -0.43
NEDD4-210ENST00000513957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
NEDD4-210ENST00000513957 NOS1P29475 1434 aa12.33□□□□□ -0.44
NEDD4-210ENST00000513957 SPHKAPQ2M3C7 1700 aa12.32□□□□□ -0.44
NEDD4-210ENST00000513957 SYNMO15061 1565 aa12.32□□□□□ -0.44
NEDD4-210ENST00000513957 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
NEDD4-210ENST00000513957 NUP155O75694 1391 aa12.3□□□□□ -0.44
NEDD4-210ENST00000513957 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
NEDD4-210ENST00000513957 FBXO31Q5XUX0 539 aaPredicted RBP12.3□□□□□ -0.44
NEDD4-210ENST00000513957 PTPRTO14522 1441 aa12.29□□□□□ -0.44
NEDD4-210ENST00000513957 ADGRB3O60242 1522 aa12.29□□□□□ -0.44
NEDD4-210ENST00000513957 HSPA2P54652 639 aa12.29□□□□□ -0.44
NEDD4-210ENST00000513957 PKD2Q13563 968 aa12.28□□□□□ -0.44
NEDD4-210ENST00000513957 THEMISQ8N1K5 641 aaPredicted RBP12.28□□□□□ -0.44
NEDD4-210ENST00000513957 SLC52A1Q9NWF4 448 aa12.28□□□□□ -0.44
NEDD4-210ENST00000513957 SLIT1O75093 1534 aa12.27□□□□□ -0.44
NEDD4-210ENST00000513957 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
NEDD4-210ENST00000513957 MED14O60244 1454 aa12.26□□□□□ -0.45
NEDD4-210ENST00000513957 ARHGAP23Q9P227 1491 aa12.26□□□□□ -0.45
NEDD4-210ENST00000513957 TRPM2O94759 1503 aa12.26□□□□□ -0.45
NEDD4-210ENST00000513957 SETD5Q9C0A6 1442 aa12.25□□□□□ -0.45
NEDD4-210ENST00000513957 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
NEDD4-210ENST00000513957 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
NEDD4-210ENST00000513957 MYO5BQ9ULV0 1848 aa12.25□□□□□ -0.45
NEDD4-210ENST00000513957 TMEM131LA2VDJ0 1609 aa12.24□□□□□ -0.45
NEDD4-210ENST00000513957 KIF1BO60333 1816 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms