RNA–Protein interactions for RNA: ENST00000513870.1

HMGN1P15-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 15, humanhuman

BASIC

Gene HMGN1P15, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P15-201ENST00000513870 KCNK17Q96T54 332 aa12.71□□□□□ -0.37
HMGN1P15-201ENST00000513870 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
HMGN1P15-201ENST00000513870 PTPREP23469 700 aa12.7□□□□□ -0.38
HMGN1P15-201ENST00000513870 ZNF687Q8N1G0 1237 aa12.7□□□□□ -0.38
HMGN1P15-201ENST00000513870 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
HMGN1P15-201ENST00000513870 POTEMA6NI47 508 aa12.67□□□□□ -0.38
HMGN1P15-201ENST00000513870 POTEGQ6S5H5 508 aa12.67□□□□□ -0.38
HMGN1P15-201ENST00000513870 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
HMGN1P15-201ENST00000513870 FCHSD2O94868 740 aa12.65□□□□□ -0.38
HMGN1P15-201ENST00000513870 PBX2P40425 430 aa12.65□□□□□ -0.38
HMGN1P15-201ENST00000513870 PSEN2P49810 448 aa12.65□□□□□ -0.38
HMGN1P15-201ENST00000513870 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
HMGN1P15-201ENST00000513870 COL9A1P20849 921 aa12.64□□□□□ -0.39
HMGN1P15-201ENST00000513870 PTGDRQ13258 359 aa12.64□□□□□ -0.39
HMGN1P15-201ENST00000513870 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
HMGN1P15-201ENST00000513870 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
HMGN1P15-201ENST00000513870 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
HMGN1P15-201ENST00000513870 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
HMGN1P15-201ENST00000513870 GPR37O15354 613 aa12.62□□□□□ -0.39
HMGN1P15-201ENST00000513870 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
HMGN1P15-201ENST00000513870 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
HMGN1P15-201ENST00000513870 HIC1Q14526 733 aa12.59□□□□□ -0.39
HMGN1P15-201ENST00000513870 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
HMGN1P15-201ENST00000513870 GNPATO15228 680 aa12.57□□□□□ -0.4
HMGN1P15-201ENST00000513870 PRSS12P56730 875 aa12.56□□□□□ -0.4
HMGN1P15-201ENST00000513870 ZMYND10O75800 440 aa12.55□□□□□ -0.4
HMGN1P15-201ENST00000513870 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
HMGN1P15-201ENST00000513870 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
HMGN1P15-201ENST00000513870 PROX2Q3B8N5 592 aa12.54□□□□□ -0.4
HMGN1P15-201ENST00000513870 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
HMGN1P15-201ENST00000513870 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
HMGN1P15-201ENST00000513870 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P15-201ENST00000513870 FECHP22830 423 aa12.53□□□□□ -0.4
HMGN1P15-201ENST00000513870 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGN1P15-201ENST00000513870 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
HMGN1P15-201ENST00000513870 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
HMGN1P15-201ENST00000513870 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
HMGN1P15-201ENST00000513870 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
HMGN1P15-201ENST00000513870 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
HMGN1P15-201ENST00000513870 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
HMGN1P15-201ENST00000513870 KRTAP3-2Q9BYR7 98 aa12.5□□□□□ -0.41
HMGN1P15-201ENST00000513870 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
HMGN1P15-201ENST00000513870 SLC4A5Q9BY07 1137 aa12.49□□□□□ -0.41
HMGN1P15-201ENST00000513870 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
HMGN1P15-201ENST00000513870 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
HMGN1P15-201ENST00000513870 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
HMGN1P15-201ENST00000513870 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
HMGN1P15-201ENST00000513870 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
HMGN1P15-201ENST00000513870 KIAA1468Q9P260 1216 aa12.47□□□□□ -0.41
HMGN1P15-201ENST00000513870 TK2O00142 265 aa12.46□□□□□ -0.41
HMGN1P15-201ENST00000513870 ADGRD1Q6QNK2 874 aa12.46□□□□□ -0.41
HMGN1P15-201ENST00000513870 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
HMGN1P15-201ENST00000513870 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
HMGN1P15-201ENST00000513870 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P15-201ENST00000513870 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
HMGN1P15-201ENST00000513870 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
HMGN1P15-201ENST00000513870 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
HMGN1P15-201ENST00000513870 IRF6O14896 467 aa12.42□□□□□ -0.42
HMGN1P15-201ENST00000513870 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
HMGN1P15-201ENST00000513870 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
HMGN1P15-201ENST00000513870 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
HMGN1P15-201ENST00000513870 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
HMGN1P15-201ENST00000513870 TATDN2Q93075 761 aa12.41□□□□□ -0.42
HMGN1P15-201ENST00000513870 SMAPO00193 183 aa12.4□□□□□ -0.42
HMGN1P15-201ENST00000513870 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
HMGN1P15-201ENST00000513870 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
HMGN1P15-201ENST00000513870 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
HMGN1P15-201ENST00000513870 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
HMGN1P15-201ENST00000513870 OATP04181 439 aa12.38□□□□□ -0.43
HMGN1P15-201ENST00000513870 AK7Q96M32 723 aa12.38□□□□□ -0.43
HMGN1P15-201ENST00000513870 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
HMGN1P15-201ENST00000513870 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
HMGN1P15-201ENST00000513870 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
HMGN1P15-201ENST00000513870 HRO43593 1189 aa12.36□□□□□ -0.43
HMGN1P15-201ENST00000513870 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
HMGN1P15-201ENST00000513870 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
HMGN1P15-201ENST00000513870 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
HMGN1P15-201ENST00000513870 EYA1Q99502 592 aa12.35□□□□□ -0.43
HMGN1P15-201ENST00000513870 FAM98CQ17RN3 349 aaKnown RBP12.32□□□□□ -0.44
HMGN1P15-201ENST00000513870 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
HMGN1P15-201ENST00000513870 TRIM66O15016 1216 aa12.31□□□□□ -0.44
HMGN1P15-201ENST00000513870 LAPTM4BQ86VI4 370 aa12.31□□□□□ -0.44
HMGN1P15-201ENST00000513870 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
HMGN1P15-201ENST00000513870 NLRP7Q8WX94 980 aa12.3□□□□□ -0.44
HMGN1P15-201ENST00000513870 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
HMGN1P15-201ENST00000513870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
HMGN1P15-201ENST00000513870 DNAJB2P25686 324 aa12.28□□□□□ -0.44
HMGN1P15-201ENST00000513870 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
HMGN1P15-201ENST00000513870 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
HMGN1P15-201ENST00000513870 TTLL12Q14166 644 aaPredicted RBP12.26□□□□□ -0.45
HMGN1P15-201ENST00000513870 AMHR2Q16671 573 aa12.25□□□□□ -0.45
HMGN1P15-201ENST00000513870 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
HMGN1P15-201ENST00000513870 PDE4DQ08499 809 aa12.24□□□□□ -0.45
HMGN1P15-201ENST00000513870 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
HMGN1P15-201ENST00000513870 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
HMGN1P15-201ENST00000513870 CLCN1P35523 988 aa12.22□□□□□ -0.45
HMGN1P15-201ENST00000513870 SWT1Q5T5J6 900 aaKnown RBP12.22□□□□□ -0.45
HMGN1P15-201ENST00000513870 ANKK1Q8NFD2 765 aa12.22□□□□□ -0.45
HMGN1P15-201ENST00000513870 WNT2BQ93097 391 aa12.22□□□□□ -0.45
HMGN1P15-201ENST00000513870 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms