RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
NIPBL-207ENST00000513819 NUDT7P0C024 238 aa9.01□□□□□ -0.97
NIPBL-207ENST00000513819 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
NIPBL-207ENST00000513819 ARSIQ5FYB1 569 aa9.01□□□□□ -0.97
NIPBL-207ENST00000513819 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
NIPBL-207ENST00000513819 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
NIPBL-207ENST00000513819 FOSBP53539 338 aa8.99□□□□□ -0.97
NIPBL-207ENST00000513819 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
NIPBL-207ENST00000513819 AMHR2Q16671 573 aa8.98□□□□□ -0.97
NIPBL-207ENST00000513819 ZNF454Q8N9F8 522 aa8.98□□□□□ -0.97
NIPBL-207ENST00000513819 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
NIPBL-207ENST00000513819 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
NIPBL-207ENST00000513819 RIMBP2O15034 1052 aa8.96□□□□□ -0.98
NIPBL-207ENST00000513819 MAMSTRQ6ZN01 415 aa8.96□□□□□ -0.98
NIPBL-207ENST00000513819 FAM117AQ9C073 453 aa8.96□□□□□ -0.98
NIPBL-207ENST00000513819 TTLL12Q14166 644 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-207ENST00000513819 C6orf132Q5T0Z8 1188 aa8.95□□□□□ -0.98
NIPBL-207ENST00000513819 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
NIPBL-207ENST00000513819 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
NIPBL-207ENST00000513819 ADAM33Q9BZ11 813 aa8.94□□□□□ -0.98
NIPBL-207ENST00000513819 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
NIPBL-207ENST00000513819 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
NIPBL-207ENST00000513819 PADI6Q6TGC4 694 aa8.92□□□□□ -0.98
NIPBL-207ENST00000513819 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
NIPBL-207ENST00000513819 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
NIPBL-207ENST00000513819 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-207ENST00000513819 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
NIPBL-207ENST00000513819 GIGYF2Q6Y7W6 1299 aaKnown RBP8.9□□□□□ -0.98
NIPBL-207ENST00000513819 C14orf37Q86TY3 774 aa8.9□□□□□ -0.98
NIPBL-207ENST00000513819 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
NIPBL-207ENST00000513819 CERKQ8TCT0 537 aa8.89□□□□□ -0.99
NIPBL-207ENST00000513819 DDRGK1Q96HY6 314 aa8.89□□□□□ -0.99
NIPBL-207ENST00000513819 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-207ENST00000513819 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-207ENST00000513819 ERICH6Q7L0X2 663 aa8.88□□□□□ -0.99
NIPBL-207ENST00000513819 MS4A1P11836 297 aa8.87□□□□□ -0.99
NIPBL-207ENST00000513819 NLRP7Q8WX94 980 aa8.87□□□□□ -0.99
NIPBL-207ENST00000513819 FAM163AQ96GL9 167 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-207ENST00000513819 PRSS12P56730 875 aa8.86□□□□□ -0.99
NIPBL-207ENST00000513819 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
NIPBL-207ENST00000513819 METTL3Q86U44 580 aaKnown RBP8.86□□□□□ -0.99
NIPBL-207ENST00000513819 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
NIPBL-207ENST00000513819 SNPHO15079 494 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 COL9A1P20849 921 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 CLCN1P35523 988 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 CDCA7LQ96GN5 454 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 GPCPD1Q9NPB8 672 aa8.85□□□□□ -0.99
NIPBL-207ENST00000513819 OATP04181 439 aa8.84□□□□□ -0.99
NIPBL-207ENST00000513819 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-207ENST00000513819 RBM27Q9P2N5 1060 aaKnown RBP8.84□□□□□ -0.99
NIPBL-207ENST00000513819 PXYLP1Q8TE99 480 aa8.83□□□□□ -1
NIPBL-207ENST00000513819 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
NIPBL-207ENST00000513819 FAM198AQ9UFP1 575 aa8.83□□□□□ -1
NIPBL-207ENST00000513819 PSDA5PKW4 1024 aaPredicted RBP8.82□□□□□ -1
NIPBL-207ENST00000513819 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
NIPBL-207ENST00000513819 PTPREP23469 700 aa8.81□□□□□ -1
NIPBL-207ENST00000513819 PPP1R3GB7ZBB8 358 aa8.79□□□□□ -1
NIPBL-207ENST00000513819 RBM46Q8TBY0 533 aaKnown RBP8.79□□□□□ -1
NIPBL-207ENST00000513819 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
NIPBL-207ENST00000513819 TSKSQ9UJT2 592 aa8.79□□□□□ -1
NIPBL-207ENST00000513819 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
NIPBL-207ENST00000513819 KCNK17Q96T54 332 aa8.77□□□□□ -1.01
NIPBL-207ENST00000513819 BEGAINQ9BUH8 593 aa8.77□□□□□ -1.01
NIPBL-207ENST00000513819 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
NIPBL-207ENST00000513819 RCCD1A6NED2 376 aa8.75□□□□□ -1.01
NIPBL-207ENST00000513819 EYA1Q99502 592 aa8.75□□□□□ -1.01
NIPBL-207ENST00000513819 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
NIPBL-207ENST00000513819 PNMA3Q9UL41 463 aa8.75□□□□□ -1.01
NIPBL-207ENST00000513819 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
NIPBL-207ENST00000513819 PROX2Q3B8N5 592 aa8.74□□□□□ -1.01
NIPBL-207ENST00000513819 PCMTD1Q96MG8 357 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-207ENST00000513819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
NIPBL-207ENST00000513819 SMAPO00193 183 aa8.73□□□□□ -1.01
NIPBL-207ENST00000513819 SH3D19Q5HYK7 790 aa8.73□□□□□ -1.01
NIPBL-207ENST00000513819 TATDN2Q93075 761 aa8.73□□□□□ -1.01
NIPBL-207ENST00000513819 NBPF26B4DH59 902 aa8.72□□□□□ -1.01
NIPBL-207ENST00000513819 PSEN2P49810 448 aa8.71□□□□□ -1.02
NIPBL-207ENST00000513819 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
NIPBL-207ENST00000513819 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
NIPBL-207ENST00000513819 ERBB3P21860 1342 aa8.71□□□□□ -1.02
NIPBL-207ENST00000513819 VARS2Q5ST30 1063 aaKnown RBP8.7□□□□□ -1.02
NIPBL-207ENST00000513819 KCNH8Q96L42 1107 aa8.7□□□□□ -1.02
NIPBL-207ENST00000513819 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
NIPBL-207ENST00000513819 POLR3EQ9NVU0 708 aa8.7□□□□□ -1.02
NIPBL-207ENST00000513819 DNAJB2P25686 324 aa8.69□□□□□ -1.02
NIPBL-207ENST00000513819 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
NIPBL-207ENST00000513819 POTEEQ6S8J3 1075 aa8.69□□□□□ -1.02
NIPBL-207ENST00000513819 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-207ENST00000513819 ZBED2Q9BTP6 218 aa8.69□□□□□ -1.02
NIPBL-207ENST00000513819 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-207ENST00000513819 DDX11L8A8MPP1 907 aa8.68□□□□□ -1.02
NIPBL-207ENST00000513819 SUPT5HO00267 1087 aaKnown RBP8.68□□□□□ -1.02
NIPBL-207ENST00000513819 ST18O60284 1047 aa8.68□□□□□ -1.02
NIPBL-207ENST00000513819 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
NIPBL-207ENST00000513819 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
NIPBL-207ENST00000513819 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
NIPBL-207ENST00000513819 MARVELD3Q96A59 401 aa8.67□□□□□ -1.02
NIPBL-207ENST00000513819 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms