RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CLCN6P51797 869 aa14.51□□□□□ -0.09
TPM3-221ENST00000513769 MIER1Q8N108 512 aa14.51□□□□□ -0.09
TPM3-221ENST00000513769 NAIPQ13075 1403 aa14.5□□□□□ -0.09
TPM3-221ENST00000513769 ASXL2Q76L83 1435 aa14.5□□□□□ -0.09
TPM3-221ENST00000513769 CDC42BPAQ5VT25 1732 aa14.5□□□□□ -0.09
TPM3-221ENST00000513769 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
TPM3-221ENST00000513769 CAMSAP2Q08AD1 1489 aa14.5□□□□□ -0.09
TPM3-221ENST00000513769 DHX57Q6P158 1386 aaKnown RBP14.49□□□□□ -0.09
TPM3-221ENST00000513769 DNMT1P26358 1616 aaKnown RBP14.48□□□□□ -0.09
TPM3-221ENST00000513769 ANKRD30AQ9BXX3 1397 aa14.48□□□□□ -0.09
TPM3-221ENST00000513769 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
TPM3-221ENST00000513769 CHIC2Q9UKJ5 165 aa14.48□□□□□ -0.09
TPM3-221ENST00000513769 NCOA1Q15788 1441 aa14.48□□□□□ -0.09
TPM3-221ENST00000513769 MBD5Q9P267 1494 aa14.47□□□□□ -0.09
TPM3-221ENST00000513769 HNRNPMP52272 730 aaKnown RBP eCLIP14.47□□□□□ -0.09
TPM3-221ENST00000513769 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
TPM3-221ENST00000513769 RRP7BPQ9NSQ0 103 aa14.46□□□□□ -0.09
TPM3-221ENST00000513769 ARHGEF5Q12774 1597 aa14.46□□□□□ -0.09
TPM3-221ENST00000513769 ADGRL2O95490 1459 aa14.45□□□□□ -0.1
TPM3-221ENST00000513769 PREX2Q70Z35 1606 aa14.45□□□□□ -0.1
TPM3-221ENST00000513769 PHF12Q96QT6 1004 aa14.45□□□□□ -0.1
TPM3-221ENST00000513769 CDC42BPBQ9Y5S2 1711 aa14.45□□□□□ -0.1
TPM3-221ENST00000513769 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
TPM3-221ENST00000513769 MYO5CQ9NQX4 1742 aa14.44□□□□□ -0.1
TPM3-221ENST00000513769 ARHGAP5Q13017 1502 aa14.43□□□□□ -0.1
TPM3-221ENST00000513769 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
TPM3-221ENST00000513769 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
TPM3-221ENST00000513769 GLI2P10070 1586 aa14.43□□□□□ -0.1
TPM3-221ENST00000513769 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
TPM3-221ENST00000513769 TTC37Q6PGP7 1564 aa14.4□□□□□ -0.1
TPM3-221ENST00000513769 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
TPM3-221ENST00000513769 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
TPM3-221ENST00000513769 RTEL1-TNFRSF6BF6WH68 1400 aa14.4□□□□□ -0.1
TPM3-221ENST00000513769 GALR2O43603 387 aaPredicted RBP14.39□□□□□ -0.11
TPM3-221ENST00000513769 CD109Q6YHK3 1445 aa14.39□□□□□ -0.11
TPM3-221ENST00000513769 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
TPM3-221ENST00000513769 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
TPM3-221ENST00000513769 PPRC1Q5VV67 1664 aaKnown RBP14.38□□□□□ -0.11
TPM3-221ENST00000513769 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
TPM3-221ENST00000513769 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
TPM3-221ENST00000513769 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
TPM3-221ENST00000513769 MPHOSPH9Q99550 1183 aa14.37□□□□□ -0.11
TPM3-221ENST00000513769 TEX14Q8IWB6 1497 aa14.37□□□□□ -0.11
TPM3-221ENST00000513769 COL17A1Q9UMD9 1497 aaPredicted RBP14.37□□□□□ -0.11
TPM3-221ENST00000513769 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
TPM3-221ENST00000513769 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
TPM3-221ENST00000513769 FANCAO15360 1455 aa14.36□□□□□ -0.11
TPM3-221ENST00000513769 ANKRD50Q9ULJ7 1429 aa14.35□□□□□ -0.11
TPM3-221ENST00000513769 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.11
TPM3-221ENST00000513769 SPAG9O60271 1321 aaKnown RBP14.33□□□□□ -0.12
TPM3-221ENST00000513769 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.12
TPM3-221ENST00000513769 NEO1Q92859 1461 aa14.32□□□□□ -0.12
TPM3-221ENST00000513769 AFAP1Q8N556 730 aa14.32□□□□□ -0.12
TPM3-221ENST00000513769 MAP3K4Q9Y6R4 1608 aa14.32□□□□□ -0.12
TPM3-221ENST00000513769 KIF15Q9NS87 1388 aa14.32□□□□□ -0.12
TPM3-221ENST00000513769 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
TPM3-221ENST00000513769 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
TPM3-221ENST00000513769 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
TPM3-221ENST00000513769 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
TPM3-221ENST00000513769 ABCC1P33527 1531 aa14.3□□□□□ -0.12
TPM3-221ENST00000513769 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
TPM3-221ENST00000513769 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
TPM3-221ENST00000513769 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
TPM3-221ENST00000513769 CCDC61Q9Y6R9 512 aa14.29□□□□□ -0.12
TPM3-221ENST00000513769 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
TPM3-221ENST00000513769 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
TPM3-221ENST00000513769 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
TPM3-221ENST00000513769 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
TPM3-221ENST00000513769 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
TPM3-221ENST00000513769 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
TPM3-221ENST00000513769 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
TPM3-221ENST00000513769 NUP155O75694 1391 aa14.25□□□□□ -0.13
TPM3-221ENST00000513769 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
TPM3-221ENST00000513769 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
TPM3-221ENST00000513769 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
TPM3-221ENST00000513769 DHX29Q7Z478 1369 aaKnown RBP14.23□□□□□ -0.13
TPM3-221ENST00000513769 LHX8Q68G74 356 aa14.23□□□□□ -0.13
TPM3-221ENST00000513769 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
TPM3-221ENST00000513769 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
TPM3-221ENST00000513769 DENND4BO75064 1496 aaPredicted RBP14.21□□□□□ -0.13
TPM3-221ENST00000513769 PKD2Q13563 968 aa14.21□□□□□ -0.13
TPM3-221ENST00000513769 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
TPM3-221ENST00000513769 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
TPM3-221ENST00000513769 NUBP1P53384 320 aa14.2□□□□□ -0.14
TPM3-221ENST00000513769 PZPP20742 1482 aa14.18□□□□□ -0.14
TPM3-221ENST00000513769 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
TPM3-221ENST00000513769 POGZQ7Z3K3 1410 aa14.17□□□□□ -0.14
TPM3-221ENST00000513769 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
TPM3-221ENST00000513769 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
TPM3-221ENST00000513769 ATP7AQ04656 1500 aa14.16□□□□□ -0.14
TPM3-221ENST00000513769 MAGI2Q86UL8 1455 aa14.16□□□□□ -0.14
TPM3-221ENST00000513769 KDM5CP41229 1560 aa14.16□□□□□ -0.14
TPM3-221ENST00000513769 KANK1Q14678 1352 aa14.15□□□□□ -0.14
TPM3-221ENST00000513769 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
TPM3-221ENST00000513769 KIF3BO15066 747 aa14.14□□□□□ -0.15
TPM3-221ENST00000513769 RAPGEF3O95398 923 aa14.14□□□□□ -0.15
TPM3-221ENST00000513769 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
TPM3-221ENST00000513769 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
TPM3-221ENST00000513769 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
TPM3-221ENST00000513769 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms