RNA–Protein interactions for RNA: ENST00000513646.1

SLC1A3-212, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-212ENST00000513646 XIRP1Q702N8 1843 aaKnown RBP12.59□□□□□ -0.39
SLC1A3-212ENST00000513646 ABCC1P33527 1531 aa12.58□□□□□ -0.4
SLC1A3-212ENST00000513646 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
SLC1A3-212ENST00000513646 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
SLC1A3-212ENST00000513646 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
SLC1A3-212ENST00000513646 MLH3Q9UHC1 1453 aa12.57□□□□□ -0.4
SLC1A3-212ENST00000513646 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
SLC1A3-212ENST00000513646 EP400Q96L91 3159 aa12.57□□□□□ -0.4
SLC1A3-212ENST00000513646 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
SLC1A3-212ENST00000513646 THEMISQ8N1K5 641 aaPredicted RBP12.56□□□□□ -0.4
SLC1A3-212ENST00000513646 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
SLC1A3-212ENST00000513646 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
SLC1A3-212ENST00000513646 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
SLC1A3-212ENST00000513646 GGT6Q6P531 493 aa12.52□□□□□ -0.41
SLC1A3-212ENST00000513646 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
SLC1A3-212ENST00000513646 TNRQ92752 1358 aa12.52□□□□□ -0.41
SLC1A3-212ENST00000513646 FGD6Q6ZV73 1430 aa12.52□□□□□ -0.41
SLC1A3-212ENST00000513646 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
SLC1A3-212ENST00000513646 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
SLC1A3-212ENST00000513646 HRCP23327 699 aa12.51□□□□□ -0.41
SLC1A3-212ENST00000513646 KDM5DQ9BY66 1539 aa12.51□□□□□ -0.41
SLC1A3-212ENST00000513646 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
SLC1A3-212ENST00000513646 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
SLC1A3-212ENST00000513646 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
SLC1A3-212ENST00000513646 TMEM94Q12767 1356 aa12.49□□□□□ -0.41
SLC1A3-212ENST00000513646 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
SLC1A3-212ENST00000513646 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
SLC1A3-212ENST00000513646 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
SLC1A3-212ENST00000513646 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
SLC1A3-212ENST00000513646 SLC34A2O95436 690 aa12.47□□□□□ -0.41
SLC1A3-212ENST00000513646 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
SLC1A3-212ENST00000513646 C8orf37Q96NL8 207 aa12.47□□□□□ -0.41
SLC1A3-212ENST00000513646 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
SLC1A3-212ENST00000513646 KIDINS220Q9ULH0 1771 aa12.47□□□□□ -0.41
SLC1A3-212ENST00000513646 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
SLC1A3-212ENST00000513646 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
SLC1A3-212ENST00000513646 NWD1Q149M9 1564 aa12.45□□□□□ -0.42
SLC1A3-212ENST00000513646 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
SLC1A3-212ENST00000513646 ZC3H13Q5T200 1668 aaKnown RBP12.44□□□□□ -0.42
SLC1A3-212ENST00000513646 PROSER2Q86WR7 435 aaPredicted RBP12.42□□□□□ -0.42
SLC1A3-212ENST00000513646 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
SLC1A3-212ENST00000513646 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
SLC1A3-212ENST00000513646 MAP3K1Q13233 1512 aa12.4□□□□□ -0.42
SLC1A3-212ENST00000513646 MSH6P52701 1360 aa12.4□□□□□ -0.42
SLC1A3-212ENST00000513646 BLMP54132 1417 aaPredicted RBP12.39□□□□□ -0.43
SLC1A3-212ENST00000513646 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
SLC1A3-212ENST00000513646 KIF14Q15058 1648 aa12.38□□□□□ -0.43
SLC1A3-212ENST00000513646 CAPN15O75808 1086 aa12.37□□□□□ -0.43
SLC1A3-212ENST00000513646 BCL9LQ86UU0 1499 aa12.37□□□□□ -0.43
SLC1A3-212ENST00000513646 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
SLC1A3-212ENST00000513646 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
SLC1A3-212ENST00000513646 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
SLC1A3-212ENST00000513646 A2MP01023 1474 aa12.34□□□□□ -0.43
SLC1A3-212ENST00000513646 PZPP20742 1482 aa12.34□□□□□ -0.43
SLC1A3-212ENST00000513646 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
SLC1A3-212ENST00000513646 TRPC5Q9UL62 973 aaPredicted RBP12.33□□□□□ -0.44
SLC1A3-212ENST00000513646 SPAG9O60271 1321 aaKnown RBP12.33□□□□□ -0.44
SLC1A3-212ENST00000513646 TIAM1Q13009 1591 aa12.32□□□□□ -0.44
SLC1A3-212ENST00000513646 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
SLC1A3-212ENST00000513646 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
SLC1A3-212ENST00000513646 USP21Q9UK80 565 aa12.32□□□□□ -0.44
SLC1A3-212ENST00000513646 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
SLC1A3-212ENST00000513646 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
SLC1A3-212ENST00000513646 KCNA6P17658 529 aa12.31□□□□□ -0.44
SLC1A3-212ENST00000513646 TXNDC2Q86VQ3 553 aa12.31□□□□□ -0.44
SLC1A3-212ENST00000513646 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
SLC1A3-212ENST00000513646 LTKP29376 864 aa12.3□□□□□ -0.44
SLC1A3-212ENST00000513646 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
SLC1A3-212ENST00000513646 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
SLC1A3-212ENST00000513646 PRDM15P57071 1507 aaPredicted RBP12.29□□□□□ -0.44
SLC1A3-212ENST00000513646 SUPT5HO00267 1087 aaKnown RBP12.29□□□□□ -0.44
SLC1A3-212ENST00000513646 DIP2AQ14689 1571 aa12.29□□□□□ -0.44
SLC1A3-212ENST00000513646 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
SLC1A3-212ENST00000513646 ABCC3O15438 1527 aa12.27□□□□□ -0.45
SLC1A3-212ENST00000513646 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
SLC1A3-212ENST00000513646 ATP1B4Q9UN42 357 aaPredicted RBP12.26□□□□□ -0.45
SLC1A3-212ENST00000513646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
SLC1A3-212ENST00000513646 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
SLC1A3-212ENST00000513646 EID1Q9Y6B2 187 aa12.25□□□□□ -0.45
SLC1A3-212ENST00000513646 KDM5AP29375 1690 aaKnown RBP12.24□□□□□ -0.45
SLC1A3-212ENST00000513646 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
SLC1A3-212ENST00000513646 ATRNO75882 1429 aa12.23□□□□□ -0.45
SLC1A3-212ENST00000513646 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
SLC1A3-212ENST00000513646 BAG6P46379 1132 aa12.23□□□□□ -0.45
SLC1A3-212ENST00000513646 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
SLC1A3-212ENST00000513646 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
SLC1A3-212ENST00000513646 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
SLC1A3-212ENST00000513646 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
SLC1A3-212ENST00000513646 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
SLC1A3-212ENST00000513646 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.45
SLC1A3-212ENST00000513646 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
SLC1A3-212ENST00000513646 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.46
SLC1A3-212ENST00000513646 LRRC59Q96AG4 307 aaKnown RBP12.2□□□□□ -0.46
SLC1A3-212ENST00000513646 CLIP1P30622 1438 aa12.2□□□□□ -0.46
SLC1A3-212ENST00000513646 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
SLC1A3-212ENST00000513646 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
SLC1A3-212ENST00000513646 UBR1Q8IWV7 1749 aa12.19□□□□□ -0.46
SLC1A3-212ENST00000513646 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
SLC1A3-212ENST00000513646 TROQ12816 1431 aaPredicted RBP12.18□□□□□ -0.46
SLC1A3-212ENST00000513646 UNC13BO14795 1591 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms