RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 GPATCH8Q9UKJ3 1502 aaKnown RBP15.09■□□□□ 0.01
CTNND2-215ENST00000513588 TCERG1O14776 1098 aaKnown RBP15.09■□□□□ 0.01
CTNND2-215ENST00000513588 TEX14Q8IWB6 1497 aa15.08■□□□□ 0
CTNND2-215ENST00000513588 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
CTNND2-215ENST00000513588 LAS1LQ9Y4W2 734 aaKnown RBP15.07■□□□□ 0
CTNND2-215ENST00000513588 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
CTNND2-215ENST00000513588 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
CTNND2-215ENST00000513588 PLIN1O60240 522 aa15.06■□□□□ 0
CTNND2-215ENST00000513588 KIAA0556O60303 1618 aa15.05■□□□□ -0
CTNND2-215ENST00000513588 DNMT1P26358 1616 aaKnown RBP15.05■□□□□ -0
CTNND2-215ENST00000513588 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
CTNND2-215ENST00000513588 PZPP20742 1482 aa15.04■□□□□ -0
CTNND2-215ENST00000513588 PBRM1Q86U86 1689 aa15.04■□□□□ -0
CTNND2-215ENST00000513588 DISP1Q96F81 1524 aa15.04■□□□□ -0
CTNND2-215ENST00000513588 DENND4BO75064 1496 aaPredicted RBP15.03■□□□□ -0
CTNND2-215ENST00000513588 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
CTNND2-215ENST00000513588 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
CTNND2-215ENST00000513588 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
CTNND2-215ENST00000513588 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
CTNND2-215ENST00000513588 SYNJ2O15056 1496 aa15.02■□□□□ -0
CTNND2-215ENST00000513588 SPATA31E1Q6ZUB1 1445 aa15.02□□□□□ -0.01
CTNND2-215ENST00000513588 DHX29Q7Z478 1369 aaKnown RBP15.02□□□□□ -0.01
CTNND2-215ENST00000513588 NEFMP07197 916 aa15.01□□□□□ -0.01
CTNND2-215ENST00000513588 PDE4AP27815 886 aa15□□□□□ -0.01
CTNND2-215ENST00000513588 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
CTNND2-215ENST00000513588 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
CTNND2-215ENST00000513588 RGS3P49796 1198 aa15□□□□□ -0.01
CTNND2-215ENST00000513588 PPM1GO15355 546 aaPredicted RBP14.98□□□□□ -0.01
CTNND2-215ENST00000513588 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
CTNND2-215ENST00000513588 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
CTNND2-215ENST00000513588 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
CTNND2-215ENST00000513588 SPAG9O60271 1321 aaKnown RBP14.97□□□□□ -0.01
CTNND2-215ENST00000513588 ITSN2Q9NZM3 1697 aa14.96□□□□□ -0.01
CTNND2-215ENST00000513588 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
CTNND2-215ENST00000513588 KIF14Q15058 1648 aa14.96□□□□□ -0.02
CTNND2-215ENST00000513588 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
CTNND2-215ENST00000513588 KANK1Q14678 1352 aa14.95□□□□□ -0.02
CTNND2-215ENST00000513588 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
CTNND2-215ENST00000513588 ARHGAP5Q13017 1502 aa14.95□□□□□ -0.02
CTNND2-215ENST00000513588 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
CTNND2-215ENST00000513588 CCDC141Q6ZP82 1450 aa14.94□□□□□ -0.02
CTNND2-215ENST00000513588 ADAMTS8Q9UP79 889 aa14.94□□□□□ -0.02
CTNND2-215ENST00000513588 ATP10BO94823 1461 aa14.93□□□□□ -0.02
CTNND2-215ENST00000513588 KIF3BO15066 747 aa14.93□□□□□ -0.02
CTNND2-215ENST00000513588 MS4A1P11836 297 aa14.92□□□□□ -0.02
CTNND2-215ENST00000513588 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
CTNND2-215ENST00000513588 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
CTNND2-215ENST00000513588 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTNND2-215ENST00000513588 FRAT1Q92837 279 aaPredicted RBP14.91□□□□□ -0.02
CTNND2-215ENST00000513588 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
CTNND2-215ENST00000513588 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
CTNND2-215ENST00000513588 ERBINQ96RT1 1412 aa14.89□□□□□ -0.03
CTNND2-215ENST00000513588 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
CTNND2-215ENST00000513588 EIF4G3O43432 1585 aaKnown RBP14.89□□□□□ -0.03
CTNND2-215ENST00000513588 UHRF1BP1Q6BDS2 1440 aa14.89□□□□□ -0.03
CTNND2-215ENST00000513588 APAF1O14727 1248 aa14.87□□□□□ -0.03
CTNND2-215ENST00000513588 PPP2R1AP30153 589 aa14.87□□□□□ -0.03
CTNND2-215ENST00000513588 CENPQQ7L2Z9 268 aaPredicted RBP14.86□□□□□ -0.03
CTNND2-215ENST00000513588 MORC1Q86VD1 984 aa14.86□□□□□ -0.03
CTNND2-215ENST00000513588 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
CTNND2-215ENST00000513588 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
CTNND2-215ENST00000513588 ARHGEF12Q9NZN5 1544 aa14.86□□□□□ -0.03
CTNND2-215ENST00000513588 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
CTNND2-215ENST00000513588 BACH2Q9BYV9 841 aa14.85□□□□□ -0.03
CTNND2-215ENST00000513588 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
CTNND2-215ENST00000513588 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
CTNND2-215ENST00000513588 PRAG1Q86YV5 1406 aa14.84□□□□□ -0.03
CTNND2-215ENST00000513588 LRPPRCP42704 1394 aaKnown RBP14.84□□□□□ -0.03
CTNND2-215ENST00000513588 PARD3Q8TEW0 1356 aa14.83□□□□□ -0.04
CTNND2-215ENST00000513588 PLEKHH2Q8IVE3 1493 aa14.83□□□□□ -0.04
CTNND2-215ENST00000513588 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
CTNND2-215ENST00000513588 SLC4A3P48751 1232 aa14.82□□□□□ -0.04
CTNND2-215ENST00000513588 ADGBQ8N7X0 1667 aa14.82□□□□□ -0.04
CTNND2-215ENST00000513588 PER1O15534 1290 aaPredicted RBP14.81□□□□□ -0.04
CTNND2-215ENST00000513588 GGT6Q6P531 493 aa14.81□□□□□ -0.04
CTNND2-215ENST00000513588 MBD5Q9P267 1494 aa14.81□□□□□ -0.04
CTNND2-215ENST00000513588 SKAP1Q86WV1 359 aa14.81□□□□□ -0.04
CTNND2-215ENST00000513588 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
CTNND2-215ENST00000513588 TESK2Q96S53 571 aa14.81□□□□□ -0.04
CTNND2-215ENST00000513588 NUP160Q12769 1436 aa14.8□□□□□ -0.04
CTNND2-215ENST00000513588 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
CTNND2-215ENST00000513588 BECN1Q14457 450 aa14.8□□□□□ -0.04
CTNND2-215ENST00000513588 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
CTNND2-215ENST00000513588 KDM5CP41229 1560 aa14.8□□□□□ -0.04
CTNND2-215ENST00000513588 USP35Q9P2H5 1018 aa14.8□□□□□ -0.04
CTNND2-215ENST00000513588 E9PSI1 815 aa14.79□□□□□ -0.04
CTNND2-215ENST00000513588 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
CTNND2-215ENST00000513588 CFAP70Q5T0N1 1121 aa14.79□□□□□ -0.04
CTNND2-215ENST00000513588 C20orf194Q5TEA3 1177 aa14.79□□□□□ -0.04
CTNND2-215ENST00000513588 CENPJQ9HC77 1338 aaPredicted RBP14.79□□□□□ -0.04
CTNND2-215ENST00000513588 FTSJ3Q8IY81 847 aaKnown RBP14.78□□□□□ -0.04
CTNND2-215ENST00000513588 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
CTNND2-215ENST00000513588 SAFB2Q14151 953 aaKnown RBP eCLIP14.77□□□□□ -0.05
CTNND2-215ENST00000513588 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.05
CTNND2-215ENST00000513588 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.05
CTNND2-215ENST00000513588 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
CTNND2-215ENST00000513588 ABCC10Q5T3U5 1492 aa14.76□□□□□ -0.05
CTNND2-215ENST00000513588 U2SURPO15042 1029 aaKnown RBP14.76□□□□□ -0.05
CTNND2-215ENST00000513588 COG6Q9Y2V7 657 aa14.75□□□□□ -0.05
CTNND2-215ENST00000513588 U2AF1L5P0DN76 240 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms