RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 GPR37O15354 613 aa5.15□□□□□ -1.59
RNF4-219ENST00000513450 FCHSD2O94868 740 aa5.15□□□□□ -1.59
RNF4-219ENST00000513450 NUDT7P0C024 238 aa5.15□□□□□ -1.59
RNF4-219ENST00000513450 FOSBP53539 338 aa5.15□□□□□ -1.59
RNF4-219ENST00000513450 EN1Q05925 392 aaPredicted RBP5.15□□□□□ -1.59
RNF4-219ENST00000513450 PSDA5PKW4 1024 aaPredicted RBP5.14□□□□□ -1.59
RNF4-219ENST00000513450 HIC1Q14526 733 aa5.14□□□□□ -1.59
RNF4-219ENST00000513450 SLC24A3Q9HC58 644 aa5.14□□□□□ -1.59
RNF4-219ENST00000513450 GNPATO15228 680 aa5.13□□□□□ -1.59
RNF4-219ENST00000513450 MAP3K7O43318 606 aa5.13□□□□□ -1.59
RNF4-219ENST00000513450 PRIM1P49642 420 aaKnown RBP5.13□□□□□ -1.59
RNF4-219ENST00000513450 PTGDRQ13258 359 aa5.13□□□□□ -1.59
RNF4-219ENST00000513450 ZNF454Q8N9F8 522 aa5.13□□□□□ -1.59
RNF4-219ENST00000513450 KRI1Q8N9T8 703 aaKnown RBP5.13□□□□□ -1.59
RNF4-219ENST00000513450 KHSRPQ92945 711 aaKnown RBP eCLIP5.13□□□□□ -1.59
RNF4-219ENST00000513450 ZDHHC16Q969W1 377 aa5.13□□□□□ -1.59
RNF4-219ENST00000513450 AK7Q96M32 723 aa5.13□□□□□ -1.59
RNF4-219ENST00000513450 ANKRD13DQ6ZTN6 518 aa5.12□□□□□ -1.59
RNF4-219ENST00000513450 CERKQ8TCT0 537 aa5.12□□□□□ -1.59
RNF4-219ENST00000513450 MINK1Q8N4C8 1332 aaPredicted RBP5.12□□□□□ -1.59
RNF4-219ENST00000513450 MAP2K5Q13163 448 aa5.11□□□□□ -1.59
RNF4-219ENST00000513450 ZNF687Q8N1G0 1237 aa5.11□□□□□ -1.59
RNF4-219ENST00000513450 RBM33Q96EV2 1170 aaKnown RBP5.11□□□□□ -1.59
RNF4-219ENST00000513450 LHX6Q9UPM6 363 aa5.11□□□□□ -1.59
RNF4-219ENST00000513450 PPP4R3BQ5MIZ7 849 aa5.1□□□□□ -1.59
RNF4-219ENST00000513450 C6orf132Q5T0Z8 1188 aa5.1□□□□□ -1.59
RNF4-219ENST00000513450 NPDC1Q9NQX5 325 aaPredicted RBP5.1□□□□□ -1.59
RNF4-219ENST00000513450 IRF6O14896 467 aa5.09□□□□□ -1.59
RNF4-219ENST00000513450 TSR1Q2NL82 804 aaKnown RBP5.09□□□□□ -1.59
RNF4-219ENST00000513450 CDHR5Q9HBB8 845 aa5.09□□□□□ -1.59
RNF4-219ENST00000513450 BRPF1P55201 1214 aaPredicted RBP5.08□□□□□ -1.6
RNF4-219ENST00000513450 ADAM33Q9BZ11 813 aa5.08□□□□□ -1.6
RNF4-219ENST00000513450 BCL2L12Q9HB09 334 aa5.08□□□□□ -1.6
RNF4-219ENST00000513450 PLA2G2EQ9NZK7 142 aa5.08□□□□□ -1.6
RNF4-219ENST00000513450 RBM27Q9P2N5 1060 aaKnown RBP5.08□□□□□ -1.6
RNF4-219ENST00000513450 TRIM66O15016 1216 aa5.07□□□□□ -1.6
RNF4-219ENST00000513450 FECHP22830 423 aa5.07□□□□□ -1.6
RNF4-219ENST00000513450 CCDC102AQ96A19 550 aa5.07□□□□□ -1.6
RNF4-219ENST00000513450 PTPREP23469 700 aa5.06□□□□□ -1.6
RNF4-219ENST00000513450 NEUROD2Q15784 382 aa5.06□□□□□ -1.6
RNF4-219ENST00000513450 PDE4DQ08499 809 aa5.05□□□□□ -1.6
RNF4-219ENST00000513450 AMHR2Q16671 573 aa5.05□□□□□ -1.6
RNF4-219ENST00000513450 TMEM132AQ24JP5 1023 aa5.05□□□□□ -1.6
RNF4-219ENST00000513450 TTC13Q8NBP0 860 aa5.05□□□□□ -1.6
RNF4-219ENST00000513450 DAXXQ9UER7 740 aaPredicted RBP5.05□□□□□ -1.6
RNF4-219ENST00000513450 PPP1R3GB7ZBB8 358 aa5.04□□□□□ -1.6
RNF4-219ENST00000513450 OATP04181 439 aa5.04□□□□□ -1.6
RNF4-219ENST00000513450 PRSS12P56730 875 aa5.04□□□□□ -1.6
RNF4-219ENST00000513450 CDCA7LQ96GN5 454 aa5.04□□□□□ -1.6
RNF4-219ENST00000513450 KCNH8Q96L42 1107 aa5.04□□□□□ -1.6
RNF4-219ENST00000513450 LSM11P83369 360 aaKnown RBP eCLIP5.03□□□□□ -1.6
RNF4-219ENST00000513450 PADI6Q6TGC4 694 aa5.03□□□□□ -1.6
RNF4-219ENST00000513450 ONECUT3O60422 494 aaPredicted RBP5.02□□□□□ -1.61
RNF4-219ENST00000513450 COL9A1P20849 921 aa5.02□□□□□ -1.61
RNF4-219ENST00000513450 ARHGAP33O14559 1287 aa5.01□□□□□ -1.61
RNF4-219ENST00000513450 PBX2P40425 430 aa5.01□□□□□ -1.61
RNF4-219ENST00000513450 KDM4CQ9H3R0 1056 aa5.01□□□□□ -1.61
RNF4-219ENST00000513450 GPBP1L1Q9HC44 474 aaPredicted RBP5.01□□□□□ -1.61
RNF4-219ENST00000513450 HCSTQ9UBK5 93 aa5.01□□□□□ -1.61
RNF4-219ENST00000513450 ADGRG1Q9Y653 693 aa5.01□□□□□ -1.61
RNF4-219ENST00000513450 TRIM6-TRIM34B2RNG4 842 aa5□□□□□ -1.61
RNF4-219ENST00000513450 CLCN1P35523 988 aa5□□□□□ -1.61
RNF4-219ENST00000513450 METTL3Q86U44 580 aaKnown RBP5□□□□□ -1.61
RNF4-219ENST00000513450 PACS2Q86VP3 889 aa5□□□□□ -1.61
RNF4-219ENST00000513450 PARP9Q8IXQ6 854 aa5□□□□□ -1.61
RNF4-219ENST00000513450 RBM46Q8TBY0 533 aaKnown RBP5□□□□□ -1.61
RNF4-219ENST00000513450 PXYLP1Q8TE99 480 aa5□□□□□ -1.61
RNF4-219ENST00000513450 KCNK17Q96T54 332 aa5□□□□□ -1.61
RNF4-219ENST00000513450 SLC4A5Q9BY07 1137 aa5□□□□□ -1.61
RNF4-219ENST00000513450 NBPF26B4DH59 902 aa4.99□□□□□ -1.61
RNF4-219ENST00000513450 TTLL12Q14166 644 aaPredicted RBP4.99□□□□□ -1.61
RNF4-219ENST00000513450 ZBED2Q9BTP6 218 aa4.99□□□□□ -1.61
RNF4-219ENST00000513450 GPCPD1Q9NPB8 672 aa4.99□□□□□ -1.61
RNF4-219ENST00000513450 TSKSQ9UJT2 592 aa4.99□□□□□ -1.61
RNF4-219ENST00000513450 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.98□□□□□ -1.61
RNF4-219ENST00000513450 FAM161AQ3B820 660 aa4.98□□□□□ -1.61
RNF4-219ENST00000513450 DDRGK1Q96HY6 314 aa4.98□□□□□ -1.61
RNF4-219ENST00000513450 PHOX2BQ99453 314 aa4.98□□□□□ -1.61
RNF4-219ENST00000513450 EYA1Q99502 592 aa4.98□□□□□ -1.61
RNF4-219ENST00000513450 TMUB1Q9BVT8 246 aa4.98□□□□□ -1.61
RNF4-219ENST00000513450 FAM198AQ9UFP1 575 aa4.98□□□□□ -1.61
RNF4-219ENST00000513450 PSEN2P49810 448 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 MDM2Q00987 491 aaPredicted RBP4.97□□□□□ -1.61
RNF4-219ENST00000513450 PROX2Q3B8N5 592 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 POTEEQ6S8J3 1075 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 GIGYF2Q6Y7W6 1299 aaKnown RBP4.97□□□□□ -1.61
RNF4-219ENST00000513450 NUDT18Q6ZVK8 323 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 TATDN2Q93075 761 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 PNMA3Q9UL41 463 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 AXIN2Q9Y2T1 843 aa4.97□□□□□ -1.61
RNF4-219ENST00000513450 DNAJB2P25686 324 aa4.96□□□□□ -1.62
RNF4-219ENST00000513450 IL27Q8NEV9 243 aa4.96□□□□□ -1.62
RNF4-219ENST00000513450 RABGEF1Q9UJ41 708 aa4.96□□□□□ -1.62
RNF4-219ENST00000513450 RCCD1A6NED2 376 aa4.95□□□□□ -1.62
RNF4-219ENST00000513450 TK2O00142 265 aa4.95□□□□□ -1.62
RNF4-219ENST00000513450 SSTR3P32745 418 aaPredicted RBP4.95□□□□□ -1.62
RNF4-219ENST00000513450 REPIN1Q9BWE0 567 aaKnown RBP4.95□□□□□ -1.62
RNF4-219ENST00000513450 FAM117AQ9C073 453 aa4.95□□□□□ -1.62
RNF4-219ENST00000513450 FAM217BQ9NTX9 383 aaPredicted RBP4.95□□□□□ -1.62
RNF4-219ENST00000513450 KIAA1468Q9P260 1216 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms