RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
KDM3B-208ENST00000512928 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
KDM3B-208ENST00000512928 MAST1Q9Y2H9 1570 aa10.07□□□□□ -0.8
KDM3B-208ENST00000512928 ZMYM3Q14202 1370 aa10.07□□□□□ -0.8
KDM3B-208ENST00000512928 FAM50AQ14320 339 aaKnown RBP10.07□□□□□ -0.8
KDM3B-208ENST00000512928 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
KDM3B-208ENST00000512928 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
KDM3B-208ENST00000512928 ZNF335Q9H4Z2 1342 aaPredicted RBP10.06□□□□□ -0.8
KDM3B-208ENST00000512928 WASHC2CQ9Y4E1 1318 aa10.06□□□□□ -0.8
KDM3B-208ENST00000512928 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
KDM3B-208ENST00000512928 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
KDM3B-208ENST00000512928 PTPRTO14522 1441 aa10.05□□□□□ -0.8
KDM3B-208ENST00000512928 DAPK1P53355 1430 aa10.05□□□□□ -0.8
KDM3B-208ENST00000512928 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
KDM3B-208ENST00000512928 KDM5DQ9BY66 1539 aa10.04□□□□□ -0.8
KDM3B-208ENST00000512928 ZNF142P52746 1687 aaPredicted RBP10.04□□□□□ -0.8
KDM3B-208ENST00000512928 RRP7BPQ9NSQ0 103 aa10.04□□□□□ -0.8
KDM3B-208ENST00000512928 ABCC5O15440 1437 aa10.04□□□□□ -0.8
KDM3B-208ENST00000512928 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
KDM3B-208ENST00000512928 KIF15Q9NS87 1388 aa10.03□□□□□ -0.8
KDM3B-208ENST00000512928 NPATQ14207 1427 aa10.03□□□□□ -0.8
KDM3B-208ENST00000512928 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
KDM3B-208ENST00000512928 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
KDM3B-208ENST00000512928 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.8
KDM3B-208ENST00000512928 CEP170BQ9Y4F5 1589 aaPredicted RBP10.02□□□□□ -0.81
KDM3B-208ENST00000512928 MSH5O43196 834 aa10.02□□□□□ -0.81
KDM3B-208ENST00000512928 EIF2AK4Q9P2K8 1649 aaKnown RBP10.02□□□□□ -0.81
KDM3B-208ENST00000512928 PTPRKQ15262 1439 aa10.01□□□□□ -0.81
KDM3B-208ENST00000512928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
KDM3B-208ENST00000512928 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
KDM3B-208ENST00000512928 RNF17Q9BXT8 1623 aaKnown RBP10□□□□□ -0.81
KDM3B-208ENST00000512928 SOCS7O14512 581 aa10□□□□□ -0.81
KDM3B-208ENST00000512928 FBXO31Q5XUX0 539 aaPredicted RBP10□□□□□ -0.81
KDM3B-208ENST00000512928 FAM135AQ9P2D6 1515 aa10□□□□□ -0.81
KDM3B-208ENST00000512928 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
KDM3B-208ENST00000512928 ITGAEP38570 1179 aa9.99□□□□□ -0.81
KDM3B-208ENST00000512928 NEURL4Q96JN8 1562 aa9.99□□□□□ -0.81
KDM3B-208ENST00000512928 ZC3H13Q5T200 1668 aaKnown RBP9.99□□□□□ -0.81
KDM3B-208ENST00000512928 PZPP20742 1482 aa9.98□□□□□ -0.81
KDM3B-208ENST00000512928 ABCC3O15438 1527 aa9.98□□□□□ -0.81
KDM3B-208ENST00000512928 DMRT2Q9Y5R5 561 aa9.98□□□□□ -0.81
KDM3B-208ENST00000512928 CEP152O94986 1710 aa9.98□□□□□ -0.81
KDM3B-208ENST00000512928 TNRQ92752 1358 aa9.98□□□□□ -0.81
KDM3B-208ENST00000512928 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
KDM3B-208ENST00000512928 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
KDM3B-208ENST00000512928 KANK1Q14678 1352 aa9.97□□□□□ -0.81
KDM3B-208ENST00000512928 MROH1Q8NDA8 1641 aa9.96□□□□□ -0.81
KDM3B-208ENST00000512928 UBAP1LF5GYI3 381 aa9.96□□□□□ -0.82
KDM3B-208ENST00000512928 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
KDM3B-208ENST00000512928 A2ML1A8K2U0 1454 aa9.95□□□□□ -0.82
KDM3B-208ENST00000512928 PRDM15P57071 1507 aaPredicted RBP9.95□□□□□ -0.82
KDM3B-208ENST00000512928 STRCP1A6NGW2 1772 aa9.95□□□□□ -0.82
KDM3B-208ENST00000512928 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
KDM3B-208ENST00000512928 ADGRL2O95490 1459 aa9.94□□□□□ -0.82
KDM3B-208ENST00000512928 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
KDM3B-208ENST00000512928 PLA2R1Q13018 1463 aa9.93□□□□□ -0.82
KDM3B-208ENST00000512928 IQSEC2Q5JU85 1478 aa9.93□□□□□ -0.82
KDM3B-208ENST00000512928 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
KDM3B-208ENST00000512928 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
KDM3B-208ENST00000512928 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
KDM3B-208ENST00000512928 HSPA1LP34931 641 aa9.92□□□□□ -0.82
KDM3B-208ENST00000512928 PIP4K2BP78356 416 aa9.92□□□□□ -0.82
KDM3B-208ENST00000512928 UGGT1Q9NYU2 1555 aa9.92□□□□□ -0.82
KDM3B-208ENST00000512928 NLRP1Q9C000 1473 aa9.91□□□□□ -0.82
KDM3B-208ENST00000512928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.91□□□□□ -0.82
KDM3B-208ENST00000512928 PKD2Q13563 968 aa9.91□□□□□ -0.82
KDM3B-208ENST00000512928 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
KDM3B-208ENST00000512928 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
KDM3B-208ENST00000512928 ADRA2BP18089 450 aa9.9□□□□□ -0.82
KDM3B-208ENST00000512928 THEMISQ8N1K5 641 aaPredicted RBP9.9□□□□□ -0.82
KDM3B-208ENST00000512928 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
KDM3B-208ENST00000512928 ANKLE2Q86XL3 938 aa9.88□□□□□ -0.83
KDM3B-208ENST00000512928 ARHGAP31Q2M1Z3 1444 aa9.88□□□□□ -0.83
KDM3B-208ENST00000512928 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
KDM3B-208ENST00000512928 EFCAB6Q5THR3 1501 aa9.87□□□□□ -0.83
KDM3B-208ENST00000512928 LMTK2Q8IWU2 1503 aa9.87□□□□□ -0.83
KDM3B-208ENST00000512928 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
KDM3B-208ENST00000512928 UNC13BO14795 1591 aa9.86□□□□□ -0.83
KDM3B-208ENST00000512928 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
KDM3B-208ENST00000512928 PIK3C2BO00750 1634 aa9.85□□□□□ -0.83
KDM3B-208ENST00000512928 UBR1Q8IWV7 1749 aa9.85□□□□□ -0.83
KDM3B-208ENST00000512928 RRBP1Q9P2E9 1410 aaKnown RBP9.85□□□□□ -0.83
KDM3B-208ENST00000512928 TET3O43151 1660 aa9.84□□□□□ -0.83
KDM3B-208ENST00000512928 NPHP4O75161 1426 aaPredicted RBP9.84□□□□□ -0.83
KDM3B-208ENST00000512928 NUP155O75694 1391 aa9.84□□□□□ -0.83
KDM3B-208ENST00000512928 SYNMO15061 1565 aa9.84□□□□□ -0.83
KDM3B-208ENST00000512928 CPS1P31327 1500 aa9.83□□□□□ -0.84
KDM3B-208ENST00000512928 EID1Q9Y6B2 187 aa9.83□□□□□ -0.84
KDM3B-208ENST00000512928 GCC2Q8IWJ2 1684 aa9.83□□□□□ -0.84
KDM3B-208ENST00000512928 IQGAP3Q86VI3 1631 aa9.82□□□□□ -0.84
KDM3B-208ENST00000512928 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
KDM3B-208ENST00000512928 IDI1Q13907 227 aa9.82□□□□□ -0.84
KDM3B-208ENST00000512928 TXNDC2Q86VQ3 553 aa9.82□□□□□ -0.84
KDM3B-208ENST00000512928 RPRD2Q5VT52 1461 aaKnown RBP9.82□□□□□ -0.84
KDM3B-208ENST00000512928 SCAF11Q99590 1463 aaKnown RBP9.82□□□□□ -0.84
KDM3B-208ENST00000512928 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
KDM3B-208ENST00000512928 POTEDQ86YR6 584 aa9.81□□□□□ -0.84
KDM3B-208ENST00000512928 BCANQ96GW7 911 aa9.81□□□□□ -0.84
KDM3B-208ENST00000512928 ADGRB3O60242 1522 aa9.81□□□□□ -0.84
KDM3B-208ENST00000512928 NOS1P29475 1434 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms