RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
HTT-210ENST00000512909 PCDHGA10Q9Y5H3 936 aa8.62□□□□□ -1.03
HTT-210ENST00000512909 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
HTT-210ENST00000512909 FOSBP53539 338 aa8.59□□□□□ -1.03
HTT-210ENST00000512909 PTGDRQ13258 359 aa8.59□□□□□ -1.03
HTT-210ENST00000512909 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.031e-12■■■■■ 29.6
HTT-210ENST00000512909 IRF6O14896 467 aa8.58□□□□□ -1.04
HTT-210ENST00000512909 TRIM66O15016 1216 aa8.58□□□□□ -1.04
HTT-210ENST00000512909 HOXB3P14651 431 aaPredicted RBP8.58□□□□□ -1.04
HTT-210ENST00000512909 PDE4DQ08499 809 aa8.58□□□□□ -1.04
HTT-210ENST00000512909 TTLL12Q14166 644 aaPredicted RBP8.58□□□□□ -1.04
HTT-210ENST00000512909 CCDC102AQ96A19 550 aa8.58□□□□□ -1.04
HTT-210ENST00000512909 ST18O60284 1047 aa8.56□□□□□ -1.04
HTT-210ENST00000512909 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
HTT-210ENST00000512909 C6orf132Q5T0Z8 1188 aa8.56□□□□□ -1.04
HTT-210ENST00000512909 GPR153Q6NV75 609 aa8.56□□□□□ -1.04
HTT-210ENST00000512909 CDHR5Q9HBB8 845 aa8.56□□□□□ -1.04
HTT-210ENST00000512909 LHX6Q9UPM6 363 aa8.56□□□□□ -1.04
HTT-210ENST00000512909 GPR37O15354 613 aa8.55□□□□□ -1.04
HTT-210ENST00000512909 PTPREP23469 700 aa8.54□□□□□ -1.04
HTT-210ENST00000512909 OATP04181 439 aa8.53□□□□□ -1.04
HTT-210ENST00000512909 HOXB1P14653 301 aaPredicted RBP8.53□□□□□ -1.04
HTT-210ENST00000512909 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
HTT-210ENST00000512909 FECHP22830 423 aa8.52□□□□□ -1.05
HTT-210ENST00000512909 ADAM33Q9BZ11 813 aa8.52□□□□□ -1.05
HTT-210ENST00000512909 KDM4CQ9H3R0 1056 aa8.52□□□□□ -1.05
HTT-210ENST00000512909 GPBP1L1Q9HC44 474 aaPredicted RBP8.52□□□□□ -1.05
HTT-210ENST00000512909 ATP1B4Q9UN42 357 aaPredicted RBP8.52□□□□□ -1.05
HTT-210ENST00000512909 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
HTT-210ENST00000512909 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
HTT-210ENST00000512909 ERBB3P21860 1342 aa8.51□□□□□ -1.05
HTT-210ENST00000512909 PADI6Q6TGC4 694 aa8.5□□□□□ -1.05
HTT-210ENST00000512909 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
HTT-210ENST00000512909 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
HTT-210ENST00000512909 KDM4FA0A1W2PPD8 638 aa8.49□□□□□ -1.05
HTT-210ENST00000512909 CLCN1P35523 988 aa8.49□□□□□ -1.05
HTT-210ENST00000512909 PRSS12P56730 875 aa8.49□□□□□ -1.05
HTT-210ENST00000512909 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
HTT-210ENST00000512909 AMHR2Q16671 573 aa8.48□□□□□ -1.05
HTT-210ENST00000512909 BCL2L12Q9HB09 334 aa8.48□□□□□ -1.05
HTT-210ENST00000512909 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
HTT-210ENST00000512909 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
HTT-210ENST00000512909 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
HTT-210ENST00000512909 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
HTT-210ENST00000512909 KCNK17Q96T54 332 aa8.47□□□□□ -1.05
HTT-210ENST00000512909 NBPF26B4DH59 902 aa8.46□□□□□ -1.06
HTT-210ENST00000512909 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.06
HTT-210ENST00000512909 EMP3P54852 163 aa8.46□□□□□ -1.06
HTT-210ENST00000512909 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
HTT-210ENST00000512909 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
HTT-210ENST00000512909 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
HTT-210ENST00000512909 PARP9Q8IXQ6 854 aa8.44□□□□□ -1.06
HTT-210ENST00000512909 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
HTT-210ENST00000512909 GIGYF2Q6Y7W6 1299 aaKnown RBP8.43□□□□□ -1.06
HTT-210ENST00000512909 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
HTT-210ENST00000512909 VARS2Q5ST30 1063 aaKnown RBP8.42□□□□□ -1.06
HTT-210ENST00000512909 PNMA3Q9UL41 463 aa8.42□□□□□ -1.06
HTT-210ENST00000512909 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
HTT-210ENST00000512909 METTL3Q86U44 580 aaKnown RBP8.41□□□□□ -1.06
HTT-210ENST00000512909 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
HTT-210ENST00000512909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
HTT-210ENST00000512909 TRIM6-TRIM34B2RNG4 842 aa8.4□□□□□ -1.06
HTT-210ENST00000512909 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.06
HTT-210ENST00000512909 SPNS2Q8IVW8 549 aa8.4□□□□□ -1.06
HTT-210ENST00000512909 STAC3Q96MF2 364 aa8.4□□□□□ -1.06
HTT-210ENST00000512909 COL9A1P20849 921 aa8.39□□□□□ -1.07
HTT-210ENST00000512909 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
HTT-210ENST00000512909 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
HTT-210ENST00000512909 PXYLP1Q8TE99 480 aa8.39□□□□□ -1.07
HTT-210ENST00000512909 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
HTT-210ENST00000512909 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 ARHGAP33O14559 1287 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 DNAJB2P25686 324 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 C14orf37Q86TY3 774 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
HTT-210ENST00000512909 RSPH6AQ9H0K4 717 aa8.38□□□□□ -1.07
HTT-210ENST00000512909 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
HTT-210ENST00000512909 PBX2P40425 430 aa8.37□□□□□ -1.07
HTT-210ENST00000512909 TATDN2Q93075 761 aa8.37□□□□□ -1.07
HTT-210ENST00000512909 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
HTT-210ENST00000512909 DIXDC1Q155Q3 683 aa8.35□□□□□ -1.07
HTT-210ENST00000512909 TTC13Q8NBP0 860 aa8.35□□□□□ -1.07
HTT-210ENST00000512909 NLRP7Q8WX94 980 aa8.35□□□□□ -1.07
HTT-210ENST00000512909 BEGAINQ9BUH8 593 aa8.35□□□□□ -1.07
HTT-210ENST00000512909 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
HTT-210ENST00000512909 TSKSQ9UJT2 592 aa8.35□□□□□ -1.07
HTT-210ENST00000512909 PSEN2P49810 448 aa8.34□□□□□ -1.07
HTT-210ENST00000512909 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
HTT-210ENST00000512909 RDH13Q8NBN7 331 aa8.34□□□□□ -1.07
HTT-210ENST00000512909 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
HTT-210ENST00000512909 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
HTT-210ENST00000512909 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
HTT-210ENST00000512909 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
HTT-210ENST00000512909 GOLGA8CPA6NN73 597 aa8.32□□□□□ -1.08
HTT-210ENST00000512909 SMAPO00193 183 aa8.32□□□□□ -1.08
HTT-210ENST00000512909 MS4A1P11836 297 aa8.32□□□□□ -1.08
HTT-210ENST00000512909 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
HTT-210ENST00000512909 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms