RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 CERKQ8TCT0 537 aa26.5■■□□□ 1.83
MATR3-220ENST00000512876 CAMSAP1Q5T5Y3 1602 aa26.5■■□□□ 1.83
MATR3-220ENST00000512876 CEP170BQ9Y4F5 1589 aaPredicted RBP26.5■■□□□ 1.83
MATR3-220ENST00000512876 PZPP20742 1482 aa26.46■■□□□ 1.83
MATR3-220ENST00000512876 PLA2R1Q13018 1463 aa26.46■■□□□ 1.83
MATR3-220ENST00000512876 RNF17Q9BXT8 1623 aaKnown RBP26.46■■□□□ 1.83
MATR3-220ENST00000512876 EIF2AK4Q9P2K8 1649 aaKnown RBP26.43■■□□□ 1.82
MATR3-220ENST00000512876 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
MATR3-220ENST00000512876 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
MATR3-220ENST00000512876 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
MATR3-220ENST00000512876 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
MATR3-220ENST00000512876 APLP2Q06481 763 aa26.39■■□□□ 1.82
MATR3-220ENST00000512876 LTBP4Q8N2S1 1624 aa26.39■■□□□ 1.81
MATR3-220ENST00000512876 WASHC2CQ9Y4E1 1318 aa26.39■■□□□ 1.81
MATR3-220ENST00000512876 MROH1Q8NDA8 1641 aa26.38■■□□□ 1.81
MATR3-220ENST00000512876 CROCC2H7BZ55 1655 aa26.38■■□□□ 1.81
MATR3-220ENST00000512876 TNRQ92752 1358 aa26.37■■□□□ 1.81
MATR3-220ENST00000512876 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
MATR3-220ENST00000512876 ABCC5O15440 1437 aa26.37■■□□□ 1.81
MATR3-220ENST00000512876 FGD6Q6ZV73 1430 aa26.37■■□□□ 1.81
MATR3-220ENST00000512876 ABCC3O15438 1527 aa26.36■■□□□ 1.81
MATR3-220ENST00000512876 DUOX2Q9NRD8 1548 aa26.36■■□□□ 1.81
MATR3-220ENST00000512876 ZC3H13Q5T200 1668 aaKnown RBP26.36■■□□□ 1.81
MATR3-220ENST00000512876 FBXO31Q5XUX0 539 aaPredicted RBP26.36■■□□□ 1.81
MATR3-220ENST00000512876 PKD2Q13563 968 aa26.33■■□□□ 1.81
MATR3-220ENST00000512876 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.81
MATR3-220ENST00000512876 DAPK1P53355 1430 aa26.31■■□□□ 1.8
MATR3-220ENST00000512876 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
MATR3-220ENST00000512876 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
MATR3-220ENST00000512876 ERBINQ96RT1 1412 aa26.29■■□□□ 1.8
MATR3-220ENST00000512876 IQSEC2Q5JU85 1478 aa26.29■■□□□ 1.8
MATR3-220ENST00000512876 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
MATR3-220ENST00000512876 PRDM15P57071 1507 aaPredicted RBP26.28■■□□□ 1.8
MATR3-220ENST00000512876 NEURL4Q96JN8 1562 aa26.24■■□□□ 1.79
MATR3-220ENST00000512876 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
MATR3-220ENST00000512876 CEP152O94986 1710 aa26.22■■□□□ 1.79
MATR3-220ENST00000512876 DEPDC5O75140 1603 aa26.22■■□□□ 1.79
MATR3-220ENST00000512876 POLR1AO95602 1720 aaPredicted RBP26.22■■□□□ 1.79
MATR3-220ENST00000512876 UGGT1Q9NYU2 1555 aa26.21■■□□□ 1.79
MATR3-220ENST00000512876 ZNF335Q9H4Z2 1342 aaPredicted RBP26.21■■□□□ 1.79
MATR3-220ENST00000512876 RRP7BPQ9NSQ0 103 aa26.19■■□□□ 1.78
MATR3-220ENST00000512876 ARHGAP31Q2M1Z3 1444 aa26.19■■□□□ 1.78
MATR3-220ENST00000512876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.18■■□□□ 1.785e-19■■□□□ 13.5
MATR3-220ENST00000512876 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
MATR3-220ENST00000512876 ANKRD30AQ9BXX3 1397 aa26.17■■□□□ 1.78
MATR3-220ENST00000512876 THEMISQ8N1K5 641 aaPredicted RBP26.15■■□□□ 1.78
MATR3-220ENST00000512876 MED14O60244 1454 aa26.14■■□□□ 1.78
MATR3-220ENST00000512876 VWDEQ8N2E2 1590 aa26.13■■□□□ 1.77
MATR3-220ENST00000512876 LMTK2Q8IWU2 1503 aa26.12■■□□□ 1.77
MATR3-220ENST00000512876 ANKLE2Q86XL3 938 aa26.11■■□□□ 1.77
MATR3-220ENST00000512876 CHIC2Q9UKJ5 165 aa26.1■■□□□ 1.77
MATR3-220ENST00000512876 UBR1Q8IWV7 1749 aa26.08■■□□□ 1.76
MATR3-220ENST00000512876 NPHP4O75161 1426 aaPredicted RBP26.07■■□□□ 1.76
MATR3-220ENST00000512876 KANK1Q14678 1352 aa26.07■■□□□ 1.76
MATR3-220ENST00000512876 CPS1P31327 1500 aa26.05■■□□□ 1.76
MATR3-220ENST00000512876 FAM50AQ14320 339 aaKnown RBP26.04■■□□□ 1.76
MATR3-220ENST00000512876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.04■■□□□ 1.761e-9■■□□□ 12
MATR3-220ENST00000512876 IQGAP1P46940 1657 aa26.03■■□□□ 1.76
MATR3-220ENST00000512876 CFAP65Q6ZU64 1925 aaKnown RBP26.03■■□□□ 1.76
MATR3-220ENST00000512876 ARHGAP23Q9P227 1491 aa26.03■■□□□ 1.76
MATR3-220ENST00000512876 SLIT1O75093 1534 aa26.02■■□□□ 1.76
MATR3-220ENST00000512876 EFCAB6Q5THR3 1501 aa26.02■■□□□ 1.76
MATR3-220ENST00000512876 ANKRD50Q9ULJ7 1429 aa26.01■■□□□ 1.75
MATR3-220ENST00000512876 SCAF11Q99590 1463 aaKnown RBP25.98■■□□□ 1.75
MATR3-220ENST00000512876 PIK3C2BO00750 1634 aa25.98■■□□□ 1.75
MATR3-220ENST00000512876 NOS1P29475 1434 aa25.97■■□□□ 1.75
MATR3-220ENST00000512876 SYNMO15061 1565 aa25.96■■□□□ 1.75
MATR3-220ENST00000512876 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
MATR3-220ENST00000512876 UBAP1LF5GYI3 381 aa25.94■■□□□ 1.74
MATR3-220ENST00000512876 ROCK1Q13464 1354 aa25.93■■□□□ 1.74
MATR3-220ENST00000512876 RPRD2Q5VT52 1461 aaKnown RBP25.91■■□□□ 1.74
MATR3-220ENST00000512876 UNC13BO14795 1591 aa25.91■■□□□ 1.74
MATR3-220ENST00000512876 LTKP29376 864 aa25.9■■□□□ 1.74
MATR3-220ENST00000512876 TMEM2Q9UHN6 1383 aa25.9■■□□□ 1.74
MATR3-220ENST00000512876 STRCP1A6NGW2 1772 aa25.9■■□□□ 1.74
MATR3-220ENST00000512876 TET3O43151 1660 aa25.89■■□□□ 1.73
MATR3-220ENST00000512876 IDI1Q13907 227 aa25.88■■□□□ 1.73
MATR3-220ENST00000512876 ADGRB3O60242 1522 aa25.87■■□□□ 1.73
MATR3-220ENST00000512876 TXNDC2Q86VQ3 553 aa25.86■■□□□ 1.73
MATR3-220ENST00000512876 LRRC7Q96NW7 1537 aa25.84■■□□□ 1.73
MATR3-220ENST00000512876 ALKQ9UM73 1620 aa25.84■■□□□ 1.73
MATR3-220ENST00000512876 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
MATR3-220ENST00000512876 SLC52A1Q9NWF4 448 aa25.82■■□□□ 1.72
MATR3-220ENST00000512876 EID1Q9Y6B2 187 aa25.82■■□□□ 1.72
MATR3-220ENST00000512876 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
MATR3-220ENST00000512876 IQGAP3Q86VI3 1631 aa25.8■■□□□ 1.72
MATR3-220ENST00000512876 TOM1O60784 492 aa25.79■■□□□ 1.72
MATR3-220ENST00000512876 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
MATR3-220ENST00000512876 PPARGC1BQ86YN6 1023 aaKnown RBP25.76■■□□□ 1.71
MATR3-220ENST00000512876 E9PCH4 1651 aa25.75■■□□□ 1.71
MATR3-220ENST00000512876 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
MATR3-220ENST00000512876 ZFYVE9O95405 1425 aa25.73■■□□□ 1.71
MATR3-220ENST00000512876 TMEM131LA2VDJ0 1609 aa25.72■■□□□ 1.71
MATR3-220ENST00000512876 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
MATR3-220ENST00000512876 ITGAEP38570 1179 aa25.7■■□□□ 1.7
MATR3-220ENST00000512876 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
MATR3-220ENST00000512876 HSPA1LP34931 641 aa25.69■■□□□ 1.7
MATR3-220ENST00000512876 NUP155O75694 1391 aa25.69■■□□□ 1.7
MATR3-220ENST00000512876 XIRP1Q702N8 1843 aaKnown RBP25.68■■□□□ 1.7
MATR3-220ENST00000512876 MYO5BQ9ULV0 1848 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms