RNA–Protein interactions for RNA: ENST00000512606.5

TMEM173-211, Transcript of transmembrane protein 173, humanhuman

TSL 1 (best)

Gene TMEM173, Length 838 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-211ENST00000512606 MBD5Q9P267 1494 aa18.93■□□□□ 0.62
TMEM173-211ENST00000512606 HSPA1LP34931 641 aa18.93■□□□□ 0.62
TMEM173-211ENST00000512606 SYNMO15061 1565 aa18.93■□□□□ 0.62
TMEM173-211ENST00000512606 IQGAP1P46940 1657 aa18.92■□□□□ 0.62
TMEM173-211ENST00000512606 RNF17Q9BXT8 1623 aaKnown RBP18.91■□□□□ 0.62
TMEM173-211ENST00000512606 RTEL1-TNFRSF6BF6WH68 1400 aa18.91■□□□□ 0.62
TMEM173-211ENST00000512606 MED14O60244 1454 aa18.9■□□□□ 0.62
TMEM173-211ENST00000512606 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
TMEM173-211ENST00000512606 GGT6Q6P531 493 aa18.89■□□□□ 0.61
TMEM173-211ENST00000512606 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
TMEM173-211ENST00000512606 TNRQ92752 1358 aa18.89■□□□□ 0.61
TMEM173-211ENST00000512606 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
TMEM173-211ENST00000512606 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
TMEM173-211ENST00000512606 NLRP1Q9C000 1473 aa18.86■□□□□ 0.61
TMEM173-211ENST00000512606 UGGT1Q9NYU2 1555 aa18.85■□□□□ 0.61
TMEM173-211ENST00000512606 DHX29Q7Z478 1369 aaKnown RBP18.85■□□□□ 0.61
TMEM173-211ENST00000512606 TOM1O60784 492 aa18.85■□□□□ 0.61
TMEM173-211ENST00000512606 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
TMEM173-211ENST00000512606 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
TMEM173-211ENST00000512606 CCDC141Q6ZP82 1450 aa18.83■□□□□ 0.6
TMEM173-211ENST00000512606 NPHP4O75161 1426 aaPredicted RBP18.83■□□□□ 0.6
TMEM173-211ENST00000512606 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
TMEM173-211ENST00000512606 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
TMEM173-211ENST00000512606 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
TMEM173-211ENST00000512606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMEM173-211ENST00000512606 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
TMEM173-211ENST00000512606 CAMSAP2Q08AD1 1489 aa18.78■□□□□ 0.6
TMEM173-211ENST00000512606 ZNF644Q9H582 1327 aaPredicted RBP18.78■□□□□ 0.6
TMEM173-211ENST00000512606 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
TMEM173-211ENST00000512606 ARHGEF5Q12774 1597 aa18.78■□□□□ 0.6
TMEM173-211ENST00000512606 MIA2Q96PC5 1412 aa18.78■□□□□ 0.6
TMEM173-211ENST00000512606 FBXO31Q5XUX0 539 aaPredicted RBP18.78■□□□□ 0.6
TMEM173-211ENST00000512606 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.6
TMEM173-211ENST00000512606 MROH1Q8NDA8 1641 aa18.76■□□□□ 0.59
TMEM173-211ENST00000512606 ABCC3O15438 1527 aa18.75■□□□□ 0.59
TMEM173-211ENST00000512606 CEP152O94986 1710 aa18.75■□□□□ 0.59
TMEM173-211ENST00000512606 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
TMEM173-211ENST00000512606 ANKLE2Q86XL3 938 aa18.75■□□□□ 0.59
TMEM173-211ENST00000512606 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
TMEM173-211ENST00000512606 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
TMEM173-211ENST00000512606 ERVK-7P63135 1459 aa18.72■□□□□ 0.59
TMEM173-211ENST00000512606 KIF3BO15066 747 aa18.72■□□□□ 0.59
TMEM173-211ENST00000512606 THEMISQ8N1K5 641 aaPredicted RBP18.71■□□□□ 0.59
TMEM173-211ENST00000512606 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
TMEM173-211ENST00000512606 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
TMEM173-211ENST00000512606 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
TMEM173-211ENST00000512606 ARHGAP23Q9P227 1491 aa18.67■□□□□ 0.58
TMEM173-211ENST00000512606 SLIT1O75093 1534 aa18.67■□□□□ 0.58
TMEM173-211ENST00000512606 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
TMEM173-211ENST00000512606 RGS17Q9UGC6 210 aaPredicted RBP18.63■□□□□ 0.57
TMEM173-211ENST00000512606 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
TMEM173-211ENST00000512606 KDM5AP29375 1690 aaKnown RBP18.62■□□□□ 0.57
TMEM173-211ENST00000512606 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
TMEM173-211ENST00000512606 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
TMEM173-211ENST00000512606 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
TMEM173-211ENST00000512606 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
TMEM173-211ENST00000512606 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
TMEM173-211ENST00000512606 CROCC2H7BZ55 1655 aa18.58■□□□□ 0.57
TMEM173-211ENST00000512606 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
TMEM173-211ENST00000512606 FAM135BQ49AJ0 1406 aa18.56■□□□□ 0.56
TMEM173-211ENST00000512606 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
TMEM173-211ENST00000512606 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
TMEM173-211ENST00000512606 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
TMEM173-211ENST00000512606 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.55
TMEM173-211ENST00000512606 LTKP29376 864 aa18.5■□□□□ 0.55
TMEM173-211ENST00000512606 TET3O43151 1660 aa18.5■□□□□ 0.55
TMEM173-211ENST00000512606 TSPY4P0CV99 314 aa18.49■□□□□ 0.55
TMEM173-211ENST00000512606 TSPY10P0CW01 314 aa18.49■□□□□ 0.55
TMEM173-211ENST00000512606 NKTRP30414 1462 aaKnown RBP18.49■□□□□ 0.55
TMEM173-211ENST00000512606 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
TMEM173-211ENST00000512606 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
TMEM173-211ENST00000512606 EFCAB6Q5THR3 1501 aa18.48■□□□□ 0.55
TMEM173-211ENST00000512606 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
TMEM173-211ENST00000512606 TMEM2Q9UHN6 1383 aa18.46■□□□□ 0.55
TMEM173-211ENST00000512606 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
TMEM173-211ENST00000512606 ADGRB3O60242 1522 aa18.45■□□□□ 0.54
TMEM173-211ENST00000512606 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
TMEM173-211ENST00000512606 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
TMEM173-211ENST00000512606 TXNDC2Q86VQ3 553 aa18.44■□□□□ 0.54
TMEM173-211ENST00000512606 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
TMEM173-211ENST00000512606 MYO5BQ9ULV0 1848 aa18.42■□□□□ 0.54
TMEM173-211ENST00000512606 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
TMEM173-211ENST00000512606 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
TMEM173-211ENST00000512606 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
TMEM173-211ENST00000512606 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
TMEM173-211ENST00000512606 VPS8Q8N3P4 1428 aa18.38■□□□□ 0.53
TMEM173-211ENST00000512606 KCNA6P17658 529 aa18.37■□□□□ 0.53
TMEM173-211ENST00000512606 NOS1P29475 1434 aa18.37■□□□□ 0.53
TMEM173-211ENST00000512606 PTPN23Q9H3S7 1636 aa18.37■□□□□ 0.53
TMEM173-211ENST00000512606 LRP6O75581 1613 aa18.36■□□□□ 0.53
TMEM173-211ENST00000512606 GCC2Q8IWJ2 1684 aa18.36■□□□□ 0.53
TMEM173-211ENST00000512606 JCADQ9P266 1359 aa18.35■□□□□ 0.53
TMEM173-211ENST00000512606 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
TMEM173-211ENST00000512606 ABCC5O15440 1437 aa18.34■□□□□ 0.53
TMEM173-211ENST00000512606 MSH6P52701 1360 aa18.32■□□□□ 0.52
TMEM173-211ENST00000512606 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
TMEM173-211ENST00000512606 ZFYVE9O95405 1425 aa18.31■□□□□ 0.52
TMEM173-211ENST00000512606 DAPK1P53355 1430 aa18.31■□□□□ 0.52
TMEM173-211ENST00000512606 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.3■□□□□ 0.52
TMEM173-211ENST00000512606 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms