RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
CCHCR1-229ENST00000512418 MYOM3Q5VTT5 1437 aa23.24■■□□□ 1.31
CCHCR1-229ENST00000512418 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
CCHCR1-229ENST00000512418 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
CCHCR1-229ENST00000512418 LTBP4Q8N2S1 1624 aa23.2■■□□□ 1.3
CCHCR1-229ENST00000512418 PZPP20742 1482 aa23.2■■□□□ 1.3
CCHCR1-229ENST00000512418 A2ML1A8K2U0 1454 aa23.19■■□□□ 1.3
CCHCR1-229ENST00000512418 TCOF1Q13428 1488 aaKnown RBP23.19■■□□□ 1.3
CCHCR1-229ENST00000512418 WASHC2CQ9Y4E1 1318 aa23.19■■□□□ 1.3
CCHCR1-229ENST00000512418 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
CCHCR1-229ENST00000512418 PKD2Q13563 968 aa23.18■■□□□ 1.3
CCHCR1-229ENST00000512418 TNRQ92752 1358 aa23.16■■□□□ 1.3
CCHCR1-229ENST00000512418 DNMT1P26358 1616 aaKnown RBP23.16■■□□□ 1.3
CCHCR1-229ENST00000512418 RNF17Q9BXT8 1623 aaKnown RBP23.16■■□□□ 1.3
CCHCR1-229ENST00000512418 IQSEC2Q5JU85 1478 aa23.15■■□□□ 1.3
CCHCR1-229ENST00000512418 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
CCHCR1-229ENST00000512418 APLP2Q06481 763 aa23.13■■□□□ 1.29
CCHCR1-229ENST00000512418 FBXO31Q5XUX0 539 aaPredicted RBP23.13■■□□□ 1.29
CCHCR1-229ENST00000512418 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
CCHCR1-229ENST00000512418 ABCC3O15438 1527 aa23.09■■□□□ 1.29
CCHCR1-229ENST00000512418 NLRP1Q9C000 1473 aa23.09■■□□□ 1.29
CCHCR1-229ENST00000512418 SHANK2Q9UPX8 1470 aa23.09■■□□□ 1.29
CCHCR1-229ENST00000512418 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
CCHCR1-229ENST00000512418 PTPN23Q9H3S7 1636 aa23.08■■□□□ 1.28
CCHCR1-229ENST00000512418 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.28
CCHCR1-229ENST00000512418 CROCC2H7BZ55 1655 aa23.07■■□□□ 1.28
CCHCR1-229ENST00000512418 POLR1AO95602 1720 aaPredicted RBP23.07■■□□□ 1.28
CCHCR1-229ENST00000512418 MROH1Q8NDA8 1641 aa23.07■■□□□ 1.28
CCHCR1-229ENST00000512418 ABCC5O15440 1437 aa23.04■■□□□ 1.28
CCHCR1-229ENST00000512418 KIF15Q9NS87 1388 aa23.03■■□□□ 1.28
CCHCR1-229ENST00000512418 SPATA31D1Q6ZQQ2 1576 aa23.03■■□□□ 1.28
CCHCR1-229ENST00000512418 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
CCHCR1-229ENST00000512418 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
CCHCR1-229ENST00000512418 FGD6Q6ZV73 1430 aa23.02■■□□□ 1.28
CCHCR1-229ENST00000512418 ERBINQ96RT1 1412 aa23.01■■□□□ 1.27
CCHCR1-229ENST00000512418 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
CCHCR1-229ENST00000512418 DAPK1P53355 1430 aa23■■□□□ 1.27
CCHCR1-229ENST00000512418 ERVK-7P63135 1459 aa23■■□□□ 1.27
CCHCR1-229ENST00000512418 CEP152O94986 1710 aa23■■□□□ 1.27
CCHCR1-229ENST00000512418 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
CCHCR1-229ENST00000512418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
CCHCR1-229ENST00000512418 ANKLE2Q86XL3 938 aa22.98■■□□□ 1.27
CCHCR1-229ENST00000512418 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
CCHCR1-229ENST00000512418 RRP7BPQ9NSQ0 103 aa22.96■■□□□ 1.27
CCHCR1-229ENST00000512418 MED14O60244 1454 aa22.94■■□□□ 1.26
CCHCR1-229ENST00000512418 ARHGAP31Q2M1Z3 1444 aa22.93■■□□□ 1.26
CCHCR1-229ENST00000512418 CPS1P31327 1500 aa22.92■■□□□ 1.26
CCHCR1-229ENST00000512418 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
CCHCR1-229ENST00000512418 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
CCHCR1-229ENST00000512418 UBAP1LF5GYI3 381 aa22.91■■□□□ 1.26
CCHCR1-229ENST00000512418 CFAP65Q6ZU64 1925 aaKnown RBP22.89■■□□□ 1.25
CCHCR1-229ENST00000512418 IQGAP1P46940 1657 aa22.89■■□□□ 1.25
CCHCR1-229ENST00000512418 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
CCHCR1-229ENST00000512418 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
CCHCR1-229ENST00000512418 KANK1Q14678 1352 aa22.88■■□□□ 1.25
CCHCR1-229ENST00000512418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.86■■□□□ 1.25
CCHCR1-229ENST00000512418 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
CCHCR1-229ENST00000512418 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
CCHCR1-229ENST00000512418 DISP3Q9P2K9 1392 aa22.85■■□□□ 1.25
CCHCR1-229ENST00000512418 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
CCHCR1-229ENST00000512418 SCAF11Q99590 1463 aaKnown RBP22.81■■□□□ 1.24
CCHCR1-229ENST00000512418 ARHGAP23Q9P227 1491 aa22.81■■□□□ 1.24
CCHCR1-229ENST00000512418 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
CCHCR1-229ENST00000512418 SLIT1O75093 1534 aa22.81■■□□□ 1.24
CCHCR1-229ENST00000512418 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
CCHCR1-229ENST00000512418 EFCAB6Q5THR3 1501 aa22.78■■□□□ 1.24
CCHCR1-229ENST00000512418 TOM1O60784 492 aa22.77■■□□□ 1.24
CCHCR1-229ENST00000512418 KDM5AP29375 1690 aaKnown RBP22.76■■□□□ 1.23
CCHCR1-229ENST00000512418 SYNMO15061 1565 aa22.76■■□□□ 1.23
CCHCR1-229ENST00000512418 ANKRD50Q9ULJ7 1429 aa22.75■■□□□ 1.23
CCHCR1-229ENST00000512418 STRCP1A6NGW2 1772 aa22.74■■□□□ 1.23
CCHCR1-229ENST00000512418 LTKP29376 864 aa22.74■■□□□ 1.23
CCHCR1-229ENST00000512418 TXNDC2Q86VQ3 553 aa22.74■■□□□ 1.23
CCHCR1-229ENST00000512418 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
CCHCR1-229ENST00000512418 SCAF1Q9H7N4 1312 aaKnown RBP22.73■■□□□ 1.23
CCHCR1-229ENST00000512418 TMEM2Q9UHN6 1383 aa22.73■■□□□ 1.23
CCHCR1-229ENST00000512418 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
CCHCR1-229ENST00000512418 NOS1P29475 1434 aa22.72■■□□□ 1.23
CCHCR1-229ENST00000512418 LRRC7Q96NW7 1537 aa22.72■■□□□ 1.23
CCHCR1-229ENST00000512418 PIP4K2BP78356 416 aa22.71■■□□□ 1.23
CCHCR1-229ENST00000512418 IDI1Q13907 227 aa22.7■■□□□ 1.22
CCHCR1-229ENST00000512418 RPRD2Q5VT52 1461 aaKnown RBP22.7■■□□□ 1.22
CCHCR1-229ENST00000512418 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
CCHCR1-229ENST00000512418 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
CCHCR1-229ENST00000512418 ADGRB3O60242 1522 aa22.67■■□□□ 1.22
CCHCR1-229ENST00000512418 TET3O43151 1660 aa22.66■■□□□ 1.22
CCHCR1-229ENST00000512418 SLC52A1Q9NWF4 448 aa22.66■■□□□ 1.22
CCHCR1-229ENST00000512418 UNC13BO14795 1591 aa22.65■■□□□ 1.22
CCHCR1-229ENST00000512418 HSPA1LP34931 641 aa22.65■■□□□ 1.22
CCHCR1-229ENST00000512418 ROCK1Q13464 1354 aa22.64■■□□□ 1.22
CCHCR1-229ENST00000512418 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
CCHCR1-229ENST00000512418 XIRP1Q702N8 1843 aaKnown RBP22.57■■□□□ 1.2
CCHCR1-229ENST00000512418 SOCS7O14512 581 aa22.56■■□□□ 1.2
CCHCR1-229ENST00000512418 IQGAP3Q86VI3 1631 aa22.56■■□□□ 1.2
CCHCR1-229ENST00000512418 MED1Q15648 1581 aaPredicted RBP22.55■■□□□ 1.2
CCHCR1-229ENST00000512418 SLC26A8Q96RN1 970 aa22.54■■□□□ 1.2
CCHCR1-229ENST00000512418 E9PCH4 1651 aa22.54■■□□□ 1.2
CCHCR1-229ENST00000512418 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
CCHCR1-229ENST00000512418 MYO5BQ9ULV0 1848 aa22.53■■□□□ 1.2
CCHCR1-229ENST00000512418 KCNA6P17658 529 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms