RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
SNX2-211ENST00000512394 CROCC2H7BZ55 1655 aa26.64■■□□□ 1.86
SNX2-211ENST00000512394 CEP170BQ9Y4F5 1589 aaPredicted RBP26.64■■□□□ 1.86
SNX2-211ENST00000512394 PTPN23Q9H3S7 1636 aa26.64■■□□□ 1.85
SNX2-211ENST00000512394 EIF2AK4Q9P2K8 1649 aaKnown RBP26.64■■□□□ 1.85
SNX2-211ENST00000512394 RNF17Q9BXT8 1623 aaKnown RBP26.63■■□□□ 1.85
SNX2-211ENST00000512394 PTPRTO14522 1441 aa26.63■■□□□ 1.85
SNX2-211ENST00000512394 PZPP20742 1482 aa26.59■■□□□ 1.85
SNX2-211ENST00000512394 SHANK2Q9UPX8 1470 aa26.59■■□□□ 1.85
SNX2-211ENST00000512394 ZC3H13Q5T200 1668 aaKnown RBP26.59■■□□□ 1.85
SNX2-211ENST00000512394 WASHC2CQ9Y4E1 1318 aa26.59■■□□□ 1.85
SNX2-211ENST00000512394 CERKQ8TCT0 537 aa26.58■■□□□ 1.85
SNX2-211ENST00000512394 FGD6Q6ZV73 1430 aa26.56■■□□□ 1.84
SNX2-211ENST00000512394 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
SNX2-211ENST00000512394 PLA2R1Q13018 1463 aa26.55■■□□□ 1.84
SNX2-211ENST00000512394 DNMT1P26358 1616 aaKnown RBP26.55■■□□□ 1.84
SNX2-211ENST00000512394 TCOF1Q13428 1488 aaKnown RBP26.55■■□□□ 1.84
SNX2-211ENST00000512394 A2ML1A8K2U0 1454 aa26.54■■□□□ 1.84
SNX2-211ENST00000512394 ABCC5O15440 1437 aa26.53■■□□□ 1.84
SNX2-211ENST00000512394 ABCC3O15438 1527 aa26.51■■□□□ 1.83
SNX2-211ENST00000512394 DAPK1P53355 1430 aa26.51■■□□□ 1.83
SNX2-211ENST00000512394 TNRQ92752 1358 aa26.51■■□□□ 1.83
SNX2-211ENST00000512394 MROH1Q8NDA8 1641 aa26.5■■□□□ 1.83
SNX2-211ENST00000512394 KIF15Q9NS87 1388 aa26.48■■□□□ 1.83
SNX2-211ENST00000512394 FBXO31Q5XUX0 539 aaPredicted RBP26.48■■□□□ 1.83
SNX2-211ENST00000512394 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
SNX2-211ENST00000512394 CEP152O94986 1710 aa26.47■■□□□ 1.83
SNX2-211ENST00000512394 PKD2Q13563 968 aa26.46■■□□□ 1.83
SNX2-211ENST00000512394 NCKAP5LQ9HCH0 1330 aa26.45■■□□□ 1.83
SNX2-211ENST00000512394 POLR1AO95602 1720 aaPredicted RBP26.45■■□□□ 1.82
SNX2-211ENST00000512394 PRDM15P57071 1507 aaPredicted RBP26.44■■□□□ 1.82
SNX2-211ENST00000512394 NLRP1Q9C000 1473 aa26.44■■□□□ 1.82
SNX2-211ENST00000512394 LTBP4Q8N2S1 1624 aa26.43■■□□□ 1.82
SNX2-211ENST00000512394 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
SNX2-211ENST00000512394 DEPDC5O75140 1603 aa26.41■■□□□ 1.82
SNX2-211ENST00000512394 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
SNX2-211ENST00000512394 ANKRD30AQ9BXX3 1397 aa26.39■■□□□ 1.82
SNX2-211ENST00000512394 UGGT1Q9NYU2 1555 aa26.38■■□□□ 1.81
SNX2-211ENST00000512394 ERVK-7P63135 1459 aa26.37■■□□□ 1.81
SNX2-211ENST00000512394 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
SNX2-211ENST00000512394 NEURL4Q96JN8 1562 aa26.34■■□□□ 1.81
SNX2-211ENST00000512394 ADGRL2O95490 1459 aa26.34■■□□□ 1.81
SNX2-211ENST00000512394 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
SNX2-211ENST00000512394 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
SNX2-211ENST00000512394 THEMISQ8N1K5 641 aaPredicted RBP26.32■■□□□ 1.8
SNX2-211ENST00000512394 CFAP65Q6ZU64 1925 aaKnown RBP26.31■■□□□ 1.8
SNX2-211ENST00000512394 ARHGAP31Q2M1Z3 1444 aa26.31■■□□□ 1.8
SNX2-211ENST00000512394 ZNF335Q9H4Z2 1342 aaPredicted RBP26.31■■□□□ 1.8
SNX2-211ENST00000512394 KANK1Q14678 1352 aa26.31■■□□□ 1.8
SNX2-211ENST00000512394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.31■■□□□ 1.8
SNX2-211ENST00000512394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.27■■□□□ 1.83e-6■■■□□ 16.8
SNX2-211ENST00000512394 UBR1Q8IWV7 1749 aa26.26■■□□□ 1.79
SNX2-211ENST00000512394 VWDEQ8N2E2 1590 aa26.26■■□□□ 1.79
SNX2-211ENST00000512394 LMTK2Q8IWU2 1503 aa26.26■■□□□ 1.79
SNX2-211ENST00000512394 ANKLE2Q86XL3 938 aa26.26■■□□□ 1.79
SNX2-211ENST00000512394 MED14O60244 1454 aa26.23■■□□□ 1.79
SNX2-211ENST00000512394 IQGAP1P46940 1657 aa26.22■■□□□ 1.79
SNX2-211ENST00000512394 NPHP4O75161 1426 aaPredicted RBP26.21■■□□□ 1.79
SNX2-211ENST00000512394 EFCAB6Q5THR3 1501 aa26.19■■□□□ 1.78
SNX2-211ENST00000512394 ANKRD50Q9ULJ7 1429 aa26.19■■□□□ 1.78
SNX2-211ENST00000512394 CPS1P31327 1500 aa26.18■■□□□ 1.78
SNX2-211ENST00000512394 PIK3C2BO00750 1634 aa26.17■■□□□ 1.78
SNX2-211ENST00000512394 KDM5AP29375 1690 aaKnown RBP26.15■■□□□ 1.78
SNX2-211ENST00000512394 SLIT1O75093 1534 aa26.14■■□□□ 1.77
SNX2-211ENST00000512394 SCAF11Q99590 1463 aaKnown RBP26.12■■□□□ 1.77
SNX2-211ENST00000512394 ARHGAP23Q9P227 1491 aa26.12■■□□□ 1.77
SNX2-211ENST00000512394 UNC13BO14795 1591 aa26.12■■□□□ 1.77
SNX2-211ENST00000512394 SYNMO15061 1565 aa26.12■■□□□ 1.77
SNX2-211ENST00000512394 ROCK1Q13464 1354 aa26.11■■□□□ 1.77
SNX2-211ENST00000512394 TET3O43151 1660 aa26.1■■□□□ 1.77
SNX2-211ENST00000512394 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
SNX2-211ENST00000512394 NOS1P29475 1434 aa26.08■■□□□ 1.77
SNX2-211ENST00000512394 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
SNX2-211ENST00000512394 UBAP1LF5GYI3 381 aa26.07■■□□□ 1.76
SNX2-211ENST00000512394 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
SNX2-211ENST00000512394 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
SNX2-211ENST00000512394 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
SNX2-211ENST00000512394 EID1Q9Y6B2 187 aa26.03■■□□□ 1.76
SNX2-211ENST00000512394 TMEM2Q9UHN6 1383 aa26.03■■□□□ 1.76
SNX2-211ENST00000512394 STRCP1A6NGW2 1772 aa26.02■■□□□ 1.76
SNX2-211ENST00000512394 TXNDC2Q86VQ3 553 aa26.02■■□□□ 1.76
SNX2-211ENST00000512394 LTKP29376 864 aa26.01■■□□□ 1.75
SNX2-211ENST00000512394 IDI1Q13907 227 aa26.01■■□□□ 1.75
SNX2-211ENST00000512394 IQGAP3Q86VI3 1631 aa26.01■■□□□ 1.75
SNX2-211ENST00000512394 ITGAEP38570 1179 aa26■■□□□ 1.75
SNX2-211ENST00000512394 SLC52A1Q9NWF4 448 aa25.99■■□□□ 1.75
SNX2-211ENST00000512394 E9PCH4 1651 aa25.97■■□□□ 1.75
SNX2-211ENST00000512394 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
SNX2-211ENST00000512394 LRRC7Q96NW7 1537 aa25.94■■□□□ 1.74
SNX2-211ENST00000512394 TOM1O60784 492 aa25.94■■□□□ 1.74
SNX2-211ENST00000512394 MYO5BQ9ULV0 1848 aa25.93■■□□□ 1.74
SNX2-211ENST00000512394 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
SNX2-211ENST00000512394 TMEM131LA2VDJ0 1609 aa25.89■■□□□ 1.74
SNX2-211ENST00000512394 NUP155O75694 1391 aa25.89■■□□□ 1.74
SNX2-211ENST00000512394 PIP4K2BP78356 416 aa25.87■■□□□ 1.73
SNX2-211ENST00000512394 ALKQ9UM73 1620 aa25.86■■□□□ 1.73
SNX2-211ENST00000512394 DISP3Q9P2K9 1392 aa25.85■■□□□ 1.73
SNX2-211ENST00000512394 ZFYVE9O95405 1425 aa25.84■■□□□ 1.73
SNX2-211ENST00000512394 XIRP1Q702N8 1843 aaKnown RBP25.84■■□□□ 1.73
SNX2-211ENST00000512394 RIMS2Q9UQ26 1411 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms