RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 PSEN2P49810 448 aa12.27□□□□□ -0.45
PDLIM3-208ENST00000512380 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.45
PDLIM3-208ENST00000512380 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.45
PDLIM3-208ENST00000512380 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
PDLIM3-208ENST00000512380 TK2O00142 265 aa12.26□□□□□ -0.45
PDLIM3-208ENST00000512380 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
PDLIM3-208ENST00000512380 ADGRD1Q6QNK2 874 aa12.26□□□□□ -0.45
PDLIM3-208ENST00000512380 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
PDLIM3-208ENST00000512380 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
PDLIM3-208ENST00000512380 DPYSL4O14531 572 aa12.23□□□□□ -0.45
PDLIM3-208ENST00000512380 RANGAP1P46060 587 aaPredicted RBP12.23□□□□□ -0.45
PDLIM3-208ENST00000512380 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
PDLIM3-208ENST00000512380 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
PDLIM3-208ENST00000512380 ADAM33Q9BZ11 813 aa12.2□□□□□ -0.46
PDLIM3-208ENST00000512380 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
PDLIM3-208ENST00000512380 HRO43593 1189 aa12.19□□□□□ -0.46
PDLIM3-208ENST00000512380 PTPREP23469 700 aa12.19□□□□□ -0.46
PDLIM3-208ENST00000512380 PHF14O94880 888 aa12.18□□□□□ -0.46
PDLIM3-208ENST00000512380 E2F4Q16254 413 aa12.18□□□□□ -0.46
PDLIM3-208ENST00000512380 PDIA6Q15084 440 aa12.17□□□□□ -0.46
PDLIM3-208ENST00000512380 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
PDLIM3-208ENST00000512380 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
PDLIM3-208ENST00000512380 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
PDLIM3-208ENST00000512380 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
PDLIM3-208ENST00000512380 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
PDLIM3-208ENST00000512380 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
PDLIM3-208ENST00000512380 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
PDLIM3-208ENST00000512380 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
PDLIM3-208ENST00000512380 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
PDLIM3-208ENST00000512380 EPAS1Q99814 870 aa12.12□□□□□ -0.47
PDLIM3-208ENST00000512380 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
PDLIM3-208ENST00000512380 PPP1R3GB7ZBB8 358 aa12.11□□□□□ -0.47
PDLIM3-208ENST00000512380 DDX12PQ92771 950 aa12.07□□□□□ -0.48
PDLIM3-208ENST00000512380 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
PDLIM3-208ENST00000512380 COL9A1P20849 921 aa12.04□□□□□ -0.48
PDLIM3-208ENST00000512380 C6orf132Q5T0Z8 1188 aa12.03□□□□□ -0.48
PDLIM3-208ENST00000512380 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
PDLIM3-208ENST00000512380 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
PDLIM3-208ENST00000512380 TRIM26Q12899 539 aaPredicted RBP12.02□□□□□ -0.49
PDLIM3-208ENST00000512380 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
PDLIM3-208ENST00000512380 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
PDLIM3-208ENST00000512380 HCSTQ9UBK5 93 aa12.01□□□□□ -0.49
PDLIM3-208ENST00000512380 PROX2Q3B8N5 592 aa11.99□□□□□ -0.49
PDLIM3-208ENST00000512380 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
PDLIM3-208ENST00000512380 RABGEF1Q9UJ41 708 aa11.99□□□□□ -0.49
PDLIM3-208ENST00000512380 SEMA3EO15041 775 aa11.98□□□□□ -0.49
PDLIM3-208ENST00000512380 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
PDLIM3-208ENST00000512380 ZMYND15Q9H091 742 aa11.98□□□□□ -0.49
PDLIM3-208ENST00000512380 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
PDLIM3-208ENST00000512380 MRPL50Q8N5N7 158 aaKnown RBP11.97□□□□□ -0.49
PDLIM3-208ENST00000512380 MAP3K7O43318 606 aa11.96□□□□□ -0.49
PDLIM3-208ENST00000512380 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
PDLIM3-208ENST00000512380 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
PDLIM3-208ENST00000512380 ZMYND10O75800 440 aa11.94□□□□□ -0.5
PDLIM3-208ENST00000512380 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
PDLIM3-208ENST00000512380 GRXCR2A6NFK2 248 aa11.93□□□□□ -0.5
PDLIM3-208ENST00000512380 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
PDLIM3-208ENST00000512380 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
PDLIM3-208ENST00000512380 OSBPP22059 807 aa11.91□□□□□ -0.5
PDLIM3-208ENST00000512380 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
PDLIM3-208ENST00000512380 GOLGA8CPA6NN73 597 aa11.9□□□□□ -0.5
PDLIM3-208ENST00000512380 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
PDLIM3-208ENST00000512380 LAPTM4BQ86VI4 370 aa11.9□□□□□ -0.5
PDLIM3-208ENST00000512380 WNT2BQ93097 391 aa11.9□□□□□ -0.5
PDLIM3-208ENST00000512380 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
PDLIM3-208ENST00000512380 ARID3AQ99856 593 aa11.89□□□□□ -0.51
PDLIM3-208ENST00000512380 HRCP23327 699 aa11.88□□□□□ -0.51
PDLIM3-208ENST00000512380 CERKQ8TCT0 537 aa11.88□□□□□ -0.51
PDLIM3-208ENST00000512380 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
PDLIM3-208ENST00000512380 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
PDLIM3-208ENST00000512380 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
PDLIM3-208ENST00000512380 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
PDLIM3-208ENST00000512380 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
PDLIM3-208ENST00000512380 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
PDLIM3-208ENST00000512380 PTPN5P54829 565 aa11.84□□□□□ -0.51
PDLIM3-208ENST00000512380 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
PDLIM3-208ENST00000512380 PRSS12P56730 875 aa11.83□□□□□ -0.52
PDLIM3-208ENST00000512380 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
PDLIM3-208ENST00000512380 SEPT9Q9UHD8 586 aaPredicted RBP11.83□□□□□ -0.52
PDLIM3-208ENST00000512380 PACS2Q86VP3 889 aa11.82□□□□□ -0.52
PDLIM3-208ENST00000512380 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
PDLIM3-208ENST00000512380 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
PDLIM3-208ENST00000512380 AK7Q96M32 723 aa11.82□□□□□ -0.52
PDLIM3-208ENST00000512380 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
PDLIM3-208ENST00000512380 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
PDLIM3-208ENST00000512380 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
PDLIM3-208ENST00000512380 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
PDLIM3-208ENST00000512380 FAM198AQ9UFP1 575 aa11.79□□□□□ -0.52
PDLIM3-208ENST00000512380 BCAMP50895 628 aa11.77□□□□□ -0.53
PDLIM3-208ENST00000512380 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
PDLIM3-208ENST00000512380 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
PDLIM3-208ENST00000512380 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
PDLIM3-208ENST00000512380 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
PDLIM3-208ENST00000512380 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
PDLIM3-208ENST00000512380 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
PDLIM3-208ENST00000512380 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
PDLIM3-208ENST00000512380 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
PDLIM3-208ENST00000512380 TATDN2Q93075 761 aa11.72□□□□□ -0.53
PDLIM3-208ENST00000512380 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
PDLIM3-208ENST00000512380 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms