RNA–Protein interactions for RNA: ENST00000512242.5

COPB2-209, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-209ENST00000512242 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
COPB2-209ENST00000512242 PTPRKQ15262 1439 aa17.08■□□□□ 0.32
COPB2-209ENST00000512242 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
COPB2-209ENST00000512242 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.32
COPB2-209ENST00000512242 MIA2Q96PC5 1412 aa17.07■□□□□ 0.32
COPB2-209ENST00000512242 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
COPB2-209ENST00000512242 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
COPB2-209ENST00000512242 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
COPB2-209ENST00000512242 NCOA1Q15788 1441 aa17.02■□□□□ 0.31
COPB2-209ENST00000512242 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
COPB2-209ENST00000512242 PTPRTO14522 1441 aa17.01■□□□□ 0.31
COPB2-209ENST00000512242 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
COPB2-209ENST00000512242 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
COPB2-209ENST00000512242 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
COPB2-209ENST00000512242 TNRQ92752 1358 aa16.99■□□□□ 0.31
COPB2-209ENST00000512242 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
COPB2-209ENST00000512242 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
COPB2-209ENST00000512242 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
COPB2-209ENST00000512242 ABCC5O15440 1437 aa16.98■□□□□ 0.31
COPB2-209ENST00000512242 PKD2Q13563 968 aa16.97■□□□□ 0.31
COPB2-209ENST00000512242 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
COPB2-209ENST00000512242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
COPB2-209ENST00000512242 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
COPB2-209ENST00000512242 A2ML1A8K2U0 1454 aa16.95■□□□□ 0.3
COPB2-209ENST00000512242 PZPP20742 1482 aa16.95■□□□□ 0.3
COPB2-209ENST00000512242 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
COPB2-209ENST00000512242 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
COPB2-209ENST00000512242 DAPK1P53355 1430 aa16.94■□□□□ 0.3
COPB2-209ENST00000512242 DUOX2Q9NRD8 1548 aa16.93■□□□□ 0.3
COPB2-209ENST00000512242 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
COPB2-209ENST00000512242 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
COPB2-209ENST00000512242 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
COPB2-209ENST00000512242 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
COPB2-209ENST00000512242 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
COPB2-209ENST00000512242 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
COPB2-209ENST00000512242 THEMISQ8N1K5 641 aaPredicted RBP16.91■□□□□ 0.3
COPB2-209ENST00000512242 ABCC3O15438 1527 aa16.91■□□□□ 0.3
COPB2-209ENST00000512242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
COPB2-209ENST00000512242 RNF17Q9BXT8 1623 aaKnown RBP16.9■□□□□ 0.3
COPB2-209ENST00000512242 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
COPB2-209ENST00000512242 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
COPB2-209ENST00000512242 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.3
COPB2-209ENST00000512242 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
COPB2-209ENST00000512242 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
COPB2-209ENST00000512242 ANKLE2Q86XL3 938 aa16.89■□□□□ 0.29
COPB2-209ENST00000512242 CEP152O94986 1710 aa16.89■□□□□ 0.29
COPB2-209ENST00000512242 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
COPB2-209ENST00000512242 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
COPB2-209ENST00000512242 ERBINQ96RT1 1412 aa16.86■□□□□ 0.29
COPB2-209ENST00000512242 NLRP1Q9C000 1473 aa16.86■□□□□ 0.29
COPB2-209ENST00000512242 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
COPB2-209ENST00000512242 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
COPB2-209ENST00000512242 KANK1Q14678 1352 aa16.85■□□□□ 0.29
COPB2-209ENST00000512242 ERVK-7P63135 1459 aa16.84■□□□□ 0.29
COPB2-209ENST00000512242 ITGAEP38570 1179 aa16.82■□□□□ 0.28
COPB2-209ENST00000512242 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
COPB2-209ENST00000512242 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
COPB2-209ENST00000512242 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
COPB2-209ENST00000512242 POLR1AO95602 1720 aaPredicted RBP16.81■□□□□ 0.28
COPB2-209ENST00000512242 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
COPB2-209ENST00000512242 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
COPB2-209ENST00000512242 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
COPB2-209ENST00000512242 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
COPB2-209ENST00000512242 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.27
COPB2-209ENST00000512242 ANKRD50Q9ULJ7 1429 aa16.76■□□□□ 0.27
COPB2-209ENST00000512242 ADGRL2O95490 1459 aa16.75■□□□□ 0.27
COPB2-209ENST00000512242 IQSEC2Q5JU85 1478 aa16.75■□□□□ 0.27
COPB2-209ENST00000512242 DEPDC5O75140 1603 aa16.75■□□□□ 0.27
COPB2-209ENST00000512242 LTKP29376 864 aa16.75■□□□□ 0.27
COPB2-209ENST00000512242 IDI1Q13907 227 aa16.75■□□□□ 0.27
COPB2-209ENST00000512242 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
COPB2-209ENST00000512242 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
COPB2-209ENST00000512242 PIP4K2BP78356 416 aa16.72■□□□□ 0.27
COPB2-209ENST00000512242 MED14O60244 1454 aa16.72■□□□□ 0.27
COPB2-209ENST00000512242 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
COPB2-209ENST00000512242 VWDEQ8N2E2 1590 aa16.7■□□□□ 0.26
COPB2-209ENST00000512242 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
COPB2-209ENST00000512242 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
COPB2-209ENST00000512242 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
COPB2-209ENST00000512242 TOM1O60784 492 aa16.69■□□□□ 0.26
COPB2-209ENST00000512242 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
COPB2-209ENST00000512242 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
COPB2-209ENST00000512242 CPS1P31327 1500 aa16.69■□□□□ 0.26
COPB2-209ENST00000512242 BCANQ96GW7 911 aa16.68■□□□□ 0.26
COPB2-209ENST00000512242 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
COPB2-209ENST00000512242 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
COPB2-209ENST00000512242 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
COPB2-209ENST00000512242 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
COPB2-209ENST00000512242 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
COPB2-209ENST00000512242 ROCK1Q13464 1354 aa16.65■□□□□ 0.26
COPB2-209ENST00000512242 SYNMO15061 1565 aa16.65■□□□□ 0.26
COPB2-209ENST00000512242 NOS1P29475 1434 aa16.65■□□□□ 0.26
COPB2-209ENST00000512242 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
COPB2-209ENST00000512242 SLIT1O75093 1534 aa16.65■□□□□ 0.26
COPB2-209ENST00000512242 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
COPB2-209ENST00000512242 NUP155O75694 1391 aa16.64■□□□□ 0.25
COPB2-209ENST00000512242 KCNA4P22459 653 aa16.63■□□□□ 0.25
COPB2-209ENST00000512242 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
COPB2-209ENST00000512242 HSPA1LP34931 641 aa16.61■□□□□ 0.25
COPB2-209ENST00000512242 TET3O43151 1660 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms