RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
LINC01088-209ENST00000512130 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
LINC01088-209ENST00000512130 DDRGK1Q96HY6 314 aa11.41□□□□□ -0.58
LINC01088-209ENST00000512130 FOSBP53539 338 aa11.39□□□□□ -0.59
LINC01088-209ENST00000512130 TSR1Q2NL82 804 aaKnown RBP11.39□□□□□ -0.59
LINC01088-209ENST00000512130 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
LINC01088-209ENST00000512130 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
LINC01088-209ENST00000512130 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
LINC01088-209ENST00000512130 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 NUDT7P0C024 238 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
LINC01088-209ENST00000512130 FAM117AQ9C073 453 aa11.36□□□□□ -0.59
LINC01088-209ENST00000512130 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
LINC01088-209ENST00000512130 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
LINC01088-209ENST00000512130 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
LINC01088-209ENST00000512130 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
LINC01088-209ENST00000512130 SNPHO15079 494 aa11.33□□□□□ -0.6
LINC01088-209ENST00000512130 CLCN1P35523 988 aa11.33□□□□□ -0.6
LINC01088-209ENST00000512130 OATP04181 439 aa11.32□□□□□ -0.6
LINC01088-209ENST00000512130 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
LINC01088-209ENST00000512130 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.67e-7■■□□□ 12.3
LINC01088-209ENST00000512130 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
LINC01088-209ENST00000512130 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
LINC01088-209ENST00000512130 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
LINC01088-209ENST00000512130 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
LINC01088-209ENST00000512130 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
LINC01088-209ENST00000512130 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
LINC01088-209ENST00000512130 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
LINC01088-209ENST00000512130 MDM2Q00987 491 aaPredicted RBP11.27□□□□□ -0.61
LINC01088-209ENST00000512130 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
LINC01088-209ENST00000512130 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
LINC01088-209ENST00000512130 PRSS12P56730 875 aa11.25□□□□□ -0.61
LINC01088-209ENST00000512130 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
LINC01088-209ENST00000512130 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
LINC01088-209ENST00000512130 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
LINC01088-209ENST00000512130 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
LINC01088-209ENST00000512130 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
LINC01088-209ENST00000512130 MS4A1P11836 297 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 PTPREP23469 700 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
LINC01088-209ENST00000512130 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 PXYLP1Q8TE99 480 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
LINC01088-209ENST00000512130 TTC13Q8NBP0 860 aa11.21□□□□□ -0.61
LINC01088-209ENST00000512130 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
LINC01088-209ENST00000512130 PHOX2BQ99453 314 aa11.21□□□□□ -0.61
LINC01088-209ENST00000512130 REPIN1Q9BWE0 567 aaKnown RBP11.21□□□□□ -0.61
LINC01088-209ENST00000512130 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
LINC01088-209ENST00000512130 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
LINC01088-209ENST00000512130 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
LINC01088-209ENST00000512130 PPP1R3GB7ZBB8 358 aa11.18□□□□□ -0.62
LINC01088-209ENST00000512130 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
LINC01088-209ENST00000512130 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
LINC01088-209ENST00000512130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.16□□□□□ -0.62
LINC01088-209ENST00000512130 BEGAINQ9BUH8 593 aa11.16□□□□□ -0.62
LINC01088-209ENST00000512130 COL9A1P20849 921 aa11.15□□□□□ -0.62
LINC01088-209ENST00000512130 SH3D19Q5HYK7 790 aa11.15□□□□□ -0.62
LINC01088-209ENST00000512130 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
LINC01088-209ENST00000512130 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
LINC01088-209ENST00000512130 NLRP7Q8WX94 980 aa11.14□□□□□ -0.63
LINC01088-209ENST00000512130 FLIIQ13045 1269 aa11.11□□□□□ -0.63
LINC01088-209ENST00000512130 SKIV2LQ15477 1246 aaKnown RBP11.11□□□□□ -0.63
LINC01088-209ENST00000512130 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
LINC01088-209ENST00000512130 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
LINC01088-209ENST00000512130 RCCD1A6NED2 376 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 NUDT18Q6ZVK8 323 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
LINC01088-209ENST00000512130 EYA1Q99502 592 aa11.09□□□□□ -0.63
LINC01088-209ENST00000512130 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
LINC01088-209ENST00000512130 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
LINC01088-209ENST00000512130 DNAJB2P25686 324 aa11.08□□□□□ -0.64
LINC01088-209ENST00000512130 TATDN2Q93075 761 aa11.08□□□□□ -0.64
LINC01088-209ENST00000512130 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
LINC01088-209ENST00000512130 ZMYND15Q9H091 742 aa11.07□□□□□ -0.64
LINC01088-209ENST00000512130 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
LINC01088-209ENST00000512130 ERBB3P21860 1342 aa11.05□□□□□ -0.64
LINC01088-209ENST00000512130 SUPT5HO00267 1087 aaKnown RBP11.04□□□□□ -0.64
LINC01088-209ENST00000512130 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
LINC01088-209ENST00000512130 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
LINC01088-209ENST00000512130 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
LINC01088-209ENST00000512130 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.65
LINC01088-209ENST00000512130 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
LINC01088-209ENST00000512130 CD46P15529 392 aa11□□□□□ -0.65
LINC01088-209ENST00000512130 LHX8Q68G74 356 aa11□□□□□ -0.65
LINC01088-209ENST00000512130 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
LINC01088-209ENST00000512130 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
LINC01088-209ENST00000512130 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
LINC01088-209ENST00000512130 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
LINC01088-209ENST00000512130 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
LINC01088-209ENST00000512130 RDH13Q8NBN7 331 aa10.99□□□□□ -0.65
LINC01088-209ENST00000512130 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
LINC01088-209ENST00000512130 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms