RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 EFCAB2Q5VUJ9 269 aa28.41■■■□□ 2.14
SPOCK3-219ENST00000511905 ABCC1P33527 1531 aa28.4■■■□□ 2.14
SPOCK3-219ENST00000511905 CCDC144AA2RUR9 1427 aa28.39■■■□□ 2.14
SPOCK3-219ENST00000511905 LAMC1P11047 1609 aa28.36■■■□□ 2.13
SPOCK3-219ENST00000511905 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
SPOCK3-219ENST00000511905 CARD11Q9BXL7 1154 aa28.36■■■□□ 2.13
SPOCK3-219ENST00000511905 PLA2R1Q13018 1463 aa28.35■■■□□ 2.13
SPOCK3-219ENST00000511905 PRAG1Q86YV5 1406 aa28.34■■■□□ 2.13
SPOCK3-219ENST00000511905 ERICH6BQ5W0A0 696 aa28.33■■■□□ 2.13
SPOCK3-219ENST00000511905 MRS2Q9HD23 443 aa28.33■■■□□ 2.13
SPOCK3-219ENST00000511905 GPRASP1Q5JY77 1395 aa28.33■■■□□ 2.13
SPOCK3-219ENST00000511905 KTN1Q86UP2 1357 aaKnown RBP28.33■■■□□ 2.13
SPOCK3-219ENST00000511905 TRPM1Q7Z4N2 1603 aa28.32■■■□□ 2.12
SPOCK3-219ENST00000511905 ZNF326Q5BKZ1 582 aaKnown RBP28.32■■■□□ 2.12
SPOCK3-219ENST00000511905 ZBED9Q6R2W3 1325 aa28.31■■■□□ 2.12
SPOCK3-219ENST00000511905 DCAF11Q8TEB1 546 aa28.3■■■□□ 2.12
SPOCK3-219ENST00000511905 CCDC184Q52MB2 194 aa28.29■■■□□ 2.12
SPOCK3-219ENST00000511905 EIF2AK4Q9P2K8 1649 aaKnown RBP28.27■■■□□ 2.12
SPOCK3-219ENST00000511905 A2MP01023 1474 aa28.23■■■□□ 2.11
SPOCK3-219ENST00000511905 E9PCH4 1651 aa28.23■■■□□ 2.11
SPOCK3-219ENST00000511905 TSHZ2Q9NRE2 1034 aa28.21■■■□□ 2.11
SPOCK3-219ENST00000511905 TRAPPC8Q9Y2L5 1435 aa28.21■■■□□ 2.11
SPOCK3-219ENST00000511905 KDM2AQ9Y2K7 1162 aa28.21■■■□□ 2.11
SPOCK3-219ENST00000511905 WDR7Q9Y4E6 1490 aa28.2■■■□□ 2.11
SPOCK3-219ENST00000511905 ST20-MTHFSA0A0A6YYL1 179 aa28.2■■■□□ 2.1
SPOCK3-219ENST00000511905 STAC3Q96MF2 364 aa28.19■■■□□ 2.1
SPOCK3-219ENST00000511905 PRDM15P57071 1507 aaPredicted RBP28.19■■■□□ 2.1
SPOCK3-219ENST00000511905 ZFYVE16Q7Z3T8 1539 aa28.18■■■□□ 2.1
SPOCK3-219ENST00000511905 ABCA9Q8IUA7 1624 aa28.18■■■□□ 2.1
SPOCK3-219ENST00000511905 FAM9BQ8IZU0 186 aa28.17■■■□□ 2.1
SPOCK3-219ENST00000511905 DEPDC5O75140 1603 aa28.17■■■□□ 2.1
SPOCK3-219ENST00000511905 SPAG9O60271 1321 aaKnown RBP28.15■■■□□ 2.1
SPOCK3-219ENST00000511905 RALBP1Q15311 655 aa28.15■■■□□ 2.1
SPOCK3-219ENST00000511905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.14■■■□□ 2.1
SPOCK3-219ENST00000511905 BCANQ96GW7 911 aa28.12■■■□□ 2.09
SPOCK3-219ENST00000511905 INO80Q9ULG1 1556 aaPredicted RBP28.11■■■□□ 2.09
SPOCK3-219ENST00000511905 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
SPOCK3-219ENST00000511905 PTPRTO14522 1441 aa28.11■■■□□ 2.09
SPOCK3-219ENST00000511905 TRPM2O94759 1503 aa28.1■■■□□ 2.09
SPOCK3-219ENST00000511905 NEURL4Q96JN8 1562 aa28.1■■■□□ 2.09
SPOCK3-219ENST00000511905 WASHC2CQ9Y4E1 1318 aa28.09■■■□□ 2.09
SPOCK3-219ENST00000511905 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
SPOCK3-219ENST00000511905 VWDEQ8N2E2 1590 aa28.09■■■□□ 2.09
SPOCK3-219ENST00000511905 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
SPOCK3-219ENST00000511905 FANCAO15360 1455 aa28.06■■■□□ 2.08
SPOCK3-219ENST00000511905 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
SPOCK3-219ENST00000511905 TET3O43151 1660 aa28.06■■■□□ 2.08
SPOCK3-219ENST00000511905 MYT1Q01538 1121 aa28.06■■■□□ 2.08
SPOCK3-219ENST00000511905 ATP7AQ04656 1500 aa28.06■■■□□ 2.08
SPOCK3-219ENST00000511905 MYBBP1AQ9BQG0 1328 aaKnown RBP28.05■■■□□ 2.08
SPOCK3-219ENST00000511905 PNISRQ8TF01 805 aaKnown RBP28.05■■■□□ 2.08
SPOCK3-219ENST00000511905 POLR3GLQ9BT43 218 aa28.04■■■□□ 2.08
SPOCK3-219ENST00000511905 LRPPRCP42704 1394 aaKnown RBP28.03■■■□□ 2.08
SPOCK3-219ENST00000511905 RGL3Q3MIN7 710 aa28.03■■■□□ 2.08
SPOCK3-219ENST00000511905 CEP152O94986 1710 aa28.02■■■□□ 2.08
SPOCK3-219ENST00000511905 SPHKAPQ2M3C7 1700 aa28.01■■■□□ 2.07
SPOCK3-219ENST00000511905 NBPF1Q3BBV0 1214 aa28.01■■■□□ 2.07
SPOCK3-219ENST00000511905 KANK1Q14678 1352 aa28■■■□□ 2.07
SPOCK3-219ENST00000511905 TESK2Q96S53 571 aa28■■■□□ 2.07
SPOCK3-219ENST00000511905 AFAP1Q8N556 730 aa27.99■■■□□ 2.07
SPOCK3-219ENST00000511905 TMC1Q8TDI8 760 aa27.99■■■□□ 2.07
SPOCK3-219ENST00000511905 INSRP06213 1382 aa27.99■■■□□ 2.07
SPOCK3-219ENST00000511905 PARD3Q8TEW0 1356 aa27.99■■■□□ 2.07
SPOCK3-219ENST00000511905 MADDQ8WXG6 1647 aa27.98■■■□□ 2.07
SPOCK3-219ENST00000511905 SCAPERQ9BY12 1400 aa27.98■■■□□ 2.07
SPOCK3-219ENST00000511905 PPP4R2Q9NY27 417 aa27.97■■■□□ 2.07
SPOCK3-219ENST00000511905 ADGRL1O94910 1474 aa27.96■■■□□ 2.07
SPOCK3-219ENST00000511905 ZMYM4Q5VZL5 1548 aa27.95■■■□□ 2.06
SPOCK3-219ENST00000511905 ASXL2Q76L83 1435 aa27.95■■■□□ 2.06
SPOCK3-219ENST00000511905 PER1O15534 1290 aaPredicted RBP27.95■■■□□ 2.06
SPOCK3-219ENST00000511905 TMF1P82094 1093 aa27.93■■■□□ 2.06
SPOCK3-219ENST00000511905 NUDCQ9Y266 331 aa27.92■■■□□ 2.06
SPOCK3-219ENST00000511905 KIAA1210Q9ULL0 1709 aa27.92■■■□□ 2.06
SPOCK3-219ENST00000511905 IQGAP1P46940 1657 aa27.92■■■□□ 2.06
SPOCK3-219ENST00000511905 NLRP13Q86W25 1043 aa27.92■■■□□ 2.06
SPOCK3-219ENST00000511905 RNF123Q5XPI4 1314 aa27.92■■■□□ 2.06
SPOCK3-219ENST00000511905 CLTCL1P53675 1640 aa27.91■■■□□ 2.06
SPOCK3-219ENST00000511905 CFAP74Q9C0B2 1584 aa27.89■■■□□ 2.06
SPOCK3-219ENST00000511905 LMTK2Q8IWU2 1503 aa27.89■■■□□ 2.06
SPOCK3-219ENST00000511905 MROH1Q8NDA8 1641 aa27.88■■■□□ 2.05
SPOCK3-219ENST00000511905 DISP3Q9P2K9 1392 aa27.87■■■□□ 2.05
SPOCK3-219ENST00000511905 ZNF518AQ6AHZ1 1483 aa27.85■■■□□ 2.05
SPOCK3-219ENST00000511905 SCAF11Q99590 1463 aaKnown RBP27.85■■■□□ 2.05
SPOCK3-219ENST00000511905 SLC24A1O60721 1099 aa27.84■■■□□ 2.05
SPOCK3-219ENST00000511905 CDCA8Q53HL2 280 aa27.83■■■□□ 2.05
SPOCK3-219ENST00000511905 MYOM2P54296 1465 aa27.82■■■□□ 2.04
SPOCK3-219ENST00000511905 KIDINS220Q9ULH0 1771 aa27.82■■■□□ 2.04
SPOCK3-219ENST00000511905 EFCAB6Q5THR3 1501 aa27.81■■■□□ 2.04
SPOCK3-219ENST00000511905 KIF3BO15066 747 aa27.78■■■□□ 2.04
SPOCK3-219ENST00000511905 NPM1P06748 294 aaKnown RBP eCLIP27.78■■■□□ 2.04
SPOCK3-219ENST00000511905 PDE3BQ13370 1112 aa27.78■■■□□ 2.04
SPOCK3-219ENST00000511905 EIF3AQ14152 1382 aaKnown RBP27.77■■■□□ 2.04
SPOCK3-219ENST00000511905 IRX6P78412 446 aaPredicted RBP27.76■■■□□ 2.03
SPOCK3-219ENST00000511905 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
SPOCK3-219ENST00000511905 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.03
SPOCK3-219ENST00000511905 SYNMO15061 1565 aa27.76■■■□□ 2.03
SPOCK3-219ENST00000511905 PANK3Q9H999 370 aa27.75■■■□□ 2.03
SPOCK3-219ENST00000511905 RBM19Q9Y4C8 960 aaKnown RBP27.75■■■□□ 2.03
SPOCK3-219ENST00000511905 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
SPOCK3-219ENST00000511905 KIF1BO60333 1816 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms