RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 ITSN2Q9NZM3 1697 aa15.47■□□□□ 0.07
PTPN20-225ENST00000511769 GGT6Q6P531 493 aa15.45■□□□□ 0.06
PTPN20-225ENST00000511769 DEPDC5O75140 1603 aa15.45■□□□□ 0.06
PTPN20-225ENST00000511769 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
PTPN20-225ENST00000511769 TNRQ92752 1358 aa15.44■□□□□ 0.06
PTPN20-225ENST00000511769 ZNF772Q68DY9 489 aaPredicted RBP15.43■□□□□ 0.06
PTPN20-225ENST00000511769 THEMISQ8N1K5 641 aaPredicted RBP15.42■□□□□ 0.06
PTPN20-225ENST00000511769 ROBO1Q9Y6N7 1651 aa15.41■□□□□ 0.06
PTPN20-225ENST00000511769 RXRBP28702 533 aa15.41■□□□□ 0.06
PTPN20-225ENST00000511769 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
PTPN20-225ENST00000511769 MEX3CQ5U5Q3 659 aaKnown RBP15.41■□□□□ 0.06
PTPN20-225ENST00000511769 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
PTPN20-225ENST00000511769 SETBP1Q9Y6X0 1596 aa15.39■□□□□ 0.05
PTPN20-225ENST00000511769 JCADQ9P266 1359 aa15.39■□□□□ 0.05
PTPN20-225ENST00000511769 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
PTPN20-225ENST00000511769 FBXO31Q5XUX0 539 aaPredicted RBP15.39■□□□□ 0.05
PTPN20-225ENST00000511769 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
PTPN20-225ENST00000511769 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
PTPN20-225ENST00000511769 PLXNC1O60486 1568 aa15.38■□□□□ 0.05
PTPN20-225ENST00000511769 SAMD9LQ8IVG5 1584 aa15.38■□□□□ 0.05
PTPN20-225ENST00000511769 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
PTPN20-225ENST00000511769 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
PTPN20-225ENST00000511769 XIRP1Q702N8 1843 aaKnown RBP15.37■□□□□ 0.05
PTPN20-225ENST00000511769 UGGT1Q9NYU2 1555 aa15.37■□□□□ 0.05
PTPN20-225ENST00000511769 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
PTPN20-225ENST00000511769 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
PTPN20-225ENST00000511769 LRP6O75581 1613 aa15.36■□□□□ 0.05
PTPN20-225ENST00000511769 A2MP01023 1474 aa15.36■□□□□ 0.05
PTPN20-225ENST00000511769 CDK12Q9NYV4 1490 aaPredicted RBP15.36■□□□□ 0.05
PTPN20-225ENST00000511769 TROQ12816 1431 aaPredicted RBP15.36■□□□□ 0.05
PTPN20-225ENST00000511769 APLP2Q06481 763 aa15.36■□□□□ 0.05
PTPN20-225ENST00000511769 SPAG9O60271 1321 aaKnown RBP15.35■□□□□ 0.05
PTPN20-225ENST00000511769 PREX2Q70Z35 1606 aa15.35■□□□□ 0.05
PTPN20-225ENST00000511769 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
PTPN20-225ENST00000511769 PHLPP1O60346 1717 aa15.33■□□□□ 0.05
PTPN20-225ENST00000511769 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
PTPN20-225ENST00000511769 ATP7AQ04656 1500 aa15.32■□□□□ 0.04
PTPN20-225ENST00000511769 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
PTPN20-225ENST00000511769 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
PTPN20-225ENST00000511769 PZPP20742 1482 aa15.3■□□□□ 0.04
PTPN20-225ENST00000511769 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
PTPN20-225ENST00000511769 NUTM2BA6NNL0 878 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-225ENST00000511769 NUTM2EB1AL46 878 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-225ENST00000511769 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-225ENST00000511769 NUTM2DQ5VT03 806 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-225ENST00000511769 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-225ENST00000511769 LRRC9Q6ZRR7 1453 aa15.3■□□□□ 0.04
PTPN20-225ENST00000511769 SPATA31A6Q5VVP1 1343 aa15.29■□□□□ 0.04
PTPN20-225ENST00000511769 RGS12O14924 1447 aa15.28■□□□□ 0.04
PTPN20-225ENST00000511769 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
PTPN20-225ENST00000511769 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
PTPN20-225ENST00000511769 ZNF777Q9ULD5 760 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-225ENST00000511769 INO80Q9ULG1 1556 aaPredicted RBP15.27■□□□□ 0.03
PTPN20-225ENST00000511769 TMEM94Q12767 1356 aa15.27■□□□□ 0.03
PTPN20-225ENST00000511769 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
PTPN20-225ENST00000511769 COL16A1Q07092 1604 aaPredicted RBP15.25■□□□□ 0.03
PTPN20-225ENST00000511769 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
PTPN20-225ENST00000511769 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPN20-225ENST00000511769 MAP3K1Q13233 1512 aa15.23■□□□□ 0.03
PTPN20-225ENST00000511769 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
PTPN20-225ENST00000511769 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
PTPN20-225ENST00000511769 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.03
PTPN20-225ENST00000511769 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
PTPN20-225ENST00000511769 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.03
PTPN20-225ENST00000511769 SCAF11Q99590 1463 aaKnown RBP15.21■□□□□ 0.03
PTPN20-225ENST00000511769 CDC42BPAQ5VT25 1732 aa15.21■□□□□ 0.02
PTPN20-225ENST00000511769 ADGBQ8N7X0 1667 aa15.21■□□□□ 0.02
PTPN20-225ENST00000511769 AFF2P51816 1311 aa15.2■□□□□ 0.02
PTPN20-225ENST00000511769 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
PTPN20-225ENST00000511769 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
PTPN20-225ENST00000511769 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
PTPN20-225ENST00000511769 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
PTPN20-225ENST00000511769 SHPRHQ149N8 1683 aa15.16■□□□□ 0.02
PTPN20-225ENST00000511769 MSH6P52701 1360 aa15.16■□□□□ 0.02
PTPN20-225ENST00000511769 LTKP29376 864 aa15.16■□□□□ 0.02
PTPN20-225ENST00000511769 LRP5O75197 1615 aa15.15■□□□□ 0.02
PTPN20-225ENST00000511769 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
PTPN20-225ENST00000511769 KIF3BO15066 747 aa15.14■□□□□ 0.01
PTPN20-225ENST00000511769 QTRT2Q9H974 415 aaKnown RBP15.14■□□□□ 0.01
PTPN20-225ENST00000511769 TIAM1Q13009 1591 aa15.14■□□□□ 0.01
PTPN20-225ENST00000511769 CCDC18Q5T9S5 1454 aa15.13■□□□□ 0.01
PTPN20-225ENST00000511769 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
PTPN20-225ENST00000511769 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
PTPN20-225ENST00000511769 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
PTPN20-225ENST00000511769 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
PTPN20-225ENST00000511769 UBR1Q8IWV7 1749 aa15.11■□□□□ 0.01
PTPN20-225ENST00000511769 KIAA1107Q9UPP5 1409 aa15.11■□□□□ 0.01
PTPN20-225ENST00000511769 KCNA6P17658 529 aa15.11■□□□□ 0.01
PTPN20-225ENST00000511769 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
PTPN20-225ENST00000511769 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
PTPN20-225ENST00000511769 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
PTPN20-225ENST00000511769 ARHGAP23Q9P227 1491 aa15.09■□□□□ 0.01
PTPN20-225ENST00000511769 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
PTPN20-225ENST00000511769 YY1P25490 414 aa15.08■□□□□ 0
PTPN20-225ENST00000511769 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
PTPN20-225ENST00000511769 NGLY1Q96IV0 654 aa15.08■□□□□ 0
PTPN20-225ENST00000511769 EID1Q9Y6B2 187 aa15.08■□□□□ 0
PTPN20-225ENST00000511769 SLIT1O75093 1534 aa15.08■□□□□ 0
PTPN20-225ENST00000511769 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
PTPN20-225ENST00000511769 AHDC1Q5TGY3 1603 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms