RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
COPS4-210ENST00000511708 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
COPS4-210ENST00000511708 TNRQ92752 1358 aa19.95■□□□□ 0.78
COPS4-210ENST00000511708 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
COPS4-210ENST00000511708 ANKLE2Q86XL3 938 aa19.93■□□□□ 0.78
COPS4-210ENST00000511708 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
COPS4-210ENST00000511708 PZPP20742 1482 aa19.92■□□□□ 0.78
COPS4-210ENST00000511708 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
COPS4-210ENST00000511708 IQGAP1P46940 1657 aa19.92■□□□□ 0.78
COPS4-210ENST00000511708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
COPS4-210ENST00000511708 SYNMO15061 1565 aa19.91■□□□□ 0.78
COPS4-210ENST00000511708 FBXO31Q5XUX0 539 aaPredicted RBP19.91■□□□□ 0.78
COPS4-210ENST00000511708 FAM135AQ9P2D6 1515 aa19.9■□□□□ 0.78
COPS4-210ENST00000511708 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
COPS4-210ENST00000511708 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
COPS4-210ENST00000511708 NLRP1Q9C000 1473 aa19.87■□□□□ 0.77
COPS4-210ENST00000511708 THEMISQ8N1K5 641 aaPredicted RBP19.87■□□□□ 0.77
COPS4-210ENST00000511708 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
COPS4-210ENST00000511708 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
COPS4-210ENST00000511708 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
COPS4-210ENST00000511708 DHX29Q7Z478 1369 aaKnown RBP19.85■□□□□ 0.77
COPS4-210ENST00000511708 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
COPS4-210ENST00000511708 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
COPS4-210ENST00000511708 RTEL1-TNFRSF6BF6WH68 1400 aa19.84■□□□□ 0.77
COPS4-210ENST00000511708 MBD5Q9P267 1494 aa19.83■□□□□ 0.76
COPS4-210ENST00000511708 ZC3H13Q5T200 1668 aaKnown RBP19.83■□□□□ 0.76
COPS4-210ENST00000511708 XIRP1Q702N8 1843 aaKnown RBP19.82■□□□□ 0.76
COPS4-210ENST00000511708 POTEAQ6S8J7 498 aa19.82■□□□□ 0.76
COPS4-210ENST00000511708 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
COPS4-210ENST00000511708 KIF3BO15066 747 aa19.77■□□□□ 0.76
COPS4-210ENST00000511708 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
COPS4-210ENST00000511708 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
COPS4-210ENST00000511708 WASHC2CQ9Y4E1 1318 aa19.75■□□□□ 0.75
COPS4-210ENST00000511708 TIAM1Q13009 1591 aa19.74■□□□□ 0.75
COPS4-210ENST00000511708 FAM135BQ49AJ0 1406 aa19.74■□□□□ 0.75
COPS4-210ENST00000511708 UBR1Q8IWV7 1749 aa19.71■□□□□ 0.75
COPS4-210ENST00000511708 CCDC141Q6ZP82 1450 aa19.67■□□□□ 0.74
COPS4-210ENST00000511708 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
COPS4-210ENST00000511708 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
COPS4-210ENST00000511708 ERVK-7P63135 1459 aa19.66■□□□□ 0.74
COPS4-210ENST00000511708 ARHGAP23Q9P227 1491 aa19.66■□□□□ 0.74
COPS4-210ENST00000511708 ABCC3O15438 1527 aa19.66■□□□□ 0.74
COPS4-210ENST00000511708 ROBO1Q9Y6N7 1651 aa19.65■□□□□ 0.74
COPS4-210ENST00000511708 NCOA2Q15596 1464 aa19.65■□□□□ 0.74
COPS4-210ENST00000511708 SLIT1O75093 1534 aa19.64■□□□□ 0.73
COPS4-210ENST00000511708 CFAP65Q6ZU64 1925 aaKnown RBP19.63■□□□□ 0.73
COPS4-210ENST00000511708 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
COPS4-210ENST00000511708 LTKP29376 864 aa19.61■□□□□ 0.73
COPS4-210ENST00000511708 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
COPS4-210ENST00000511708 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
COPS4-210ENST00000511708 CAMSAP2Q08AD1 1489 aa19.59■□□□□ 0.73
COPS4-210ENST00000511708 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.73
COPS4-210ENST00000511708 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.72
COPS4-210ENST00000511708 ARHGEF5Q12774 1597 aa19.57■□□□□ 0.72
COPS4-210ENST00000511708 CEP152O94986 1710 aa19.57■□□□□ 0.72
COPS4-210ENST00000511708 UPF1Q92900 1129 aaKnown RBP eCLIP19.57■□□□□ 0.72
COPS4-210ENST00000511708 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
COPS4-210ENST00000511708 EIF2AK4Q9P2K8 1649 aaKnown RBP19.56■□□□□ 0.72
COPS4-210ENST00000511708 TXNDC2Q86VQ3 553 aa19.56■□□□□ 0.72
COPS4-210ENST00000511708 LRRC9Q6ZRR7 1453 aa19.55■□□□□ 0.72
COPS4-210ENST00000511708 PHLPP1O60346 1717 aa19.54■□□□□ 0.72
COPS4-210ENST00000511708 SRCAPQ6ZRS2 3230 aa19.53■□□□□ 0.72
COPS4-210ENST00000511708 JCADQ9P266 1359 aa19.52■□□□□ 0.72
COPS4-210ENST00000511708 MAST1Q9Y2H9 1570 aa19.5■□□□□ 0.71
COPS4-210ENST00000511708 KCNA6P17658 529 aa19.49■□□□□ 0.71
COPS4-210ENST00000511708 EID1Q9Y6B2 187 aa19.49■□□□□ 0.71
COPS4-210ENST00000511708 PIK3C2BO00750 1634 aa19.49■□□□□ 0.71
COPS4-210ENST00000511708 COL16A1Q07092 1604 aaPredicted RBP19.49■□□□□ 0.71
COPS4-210ENST00000511708 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
COPS4-210ENST00000511708 TET3O43151 1660 aa19.49■□□□□ 0.71
COPS4-210ENST00000511708 TMEM2Q9UHN6 1383 aa19.48■□□□□ 0.71
COPS4-210ENST00000511708 KDM5AP29375 1690 aaKnown RBP19.48■□□□□ 0.71
COPS4-210ENST00000511708 ARHGAP31Q2M1Z3 1444 aa19.48■□□□□ 0.71
COPS4-210ENST00000511708 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
COPS4-210ENST00000511708 LRP6O75581 1613 aa19.47■□□□□ 0.71
COPS4-210ENST00000511708 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
COPS4-210ENST00000511708 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
COPS4-210ENST00000511708 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
COPS4-210ENST00000511708 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
COPS4-210ENST00000511708 PROSER2Q86WR7 435 aaPredicted RBP19.45■□□□□ 0.7
COPS4-210ENST00000511708 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
COPS4-210ENST00000511708 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
COPS4-210ENST00000511708 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
COPS4-210ENST00000511708 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
COPS4-210ENST00000511708 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
COPS4-210ENST00000511708 SPATA31A6Q5VVP1 1343 aa19.41■□□□□ 0.7
COPS4-210ENST00000511708 MSH6P52701 1360 aa19.41■□□□□ 0.7
COPS4-210ENST00000511708 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
COPS4-210ENST00000511708 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
COPS4-210ENST00000511708 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
COPS4-210ENST00000511708 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
COPS4-210ENST00000511708 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
COPS4-210ENST00000511708 DUOX2Q9NRD8 1548 aa19.37■□□□□ 0.69
COPS4-210ENST00000511708 AHDC1Q5TGY3 1603 aaPredicted RBP19.35■□□□□ 0.69
COPS4-210ENST00000511708 RXRBP28702 533 aa19.33■□□□□ 0.68
COPS4-210ENST00000511708 MEX3CQ5U5Q3 659 aaKnown RBP19.33■□□□□ 0.68
COPS4-210ENST00000511708 IDI1Q13907 227 aa19.32■□□□□ 0.68
COPS4-210ENST00000511708 STAG3Q9UJ98 1225 aa19.32■□□□□ 0.68
COPS4-210ENST00000511708 ADGRB3O60242 1522 aa19.3■□□□□ 0.68
COPS4-210ENST00000511708 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms