RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
POLR2J3-215ENST00000511313 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
POLR2J3-215ENST00000511313 GLI2P10070 1586 aa13.13□□□□□ -0.31
POLR2J3-215ENST00000511313 ANKRD30BQ9BXX2 1392 aa13.13□□□□□ -0.31
POLR2J3-215ENST00000511313 TMF1P82094 1093 aa13.12□□□□□ -0.31
POLR2J3-215ENST00000511313 ABCA8O94911 1581 aa13.12□□□□□ -0.31
POLR2J3-215ENST00000511313 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-215ENST00000511313 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
POLR2J3-215ENST00000511313 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
POLR2J3-215ENST00000511313 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
POLR2J3-215ENST00000511313 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
POLR2J3-215ENST00000511313 CDK13Q14004 1512 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-215ENST00000511313 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 MPHOSPH9Q99550 1183 aa13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 CFAP43Q8NDM7 1665 aa13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 DAPK1P53355 1430 aa13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-215ENST00000511313 MSH6P52701 1360 aa13.08□□□□□ -0.32
POLR2J3-215ENST00000511313 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
POLR2J3-215ENST00000511313 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
POLR2J3-215ENST00000511313 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
POLR2J3-215ENST00000511313 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-215ENST00000511313 SAMD9Q5K651 1589 aa13.06□□□□□ -0.32
POLR2J3-215ENST00000511313 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
POLR2J3-215ENST00000511313 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
POLR2J3-215ENST00000511313 UBAP1LF5GYI3 381 aa13.05□□□□□ -0.32
POLR2J3-215ENST00000511313 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
POLR2J3-215ENST00000511313 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
POLR2J3-215ENST00000511313 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
POLR2J3-215ENST00000511313 EVC2Q86UK5 1308 aa13.04□□□□□ -0.32
POLR2J3-215ENST00000511313 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
POLR2J3-215ENST00000511313 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-215ENST00000511313 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
POLR2J3-215ENST00000511313 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-215ENST00000511313 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-215ENST00000511313 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
POLR2J3-215ENST00000511313 EVA1CP58658 441 aa13.01□□□□□ -0.33
POLR2J3-215ENST00000511313 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
POLR2J3-215ENST00000511313 ZCCHC11Q5TAX3 1644 aaKnown RBP13□□□□□ -0.33
POLR2J3-215ENST00000511313 ZMYM3Q14202 1370 aa13□□□□□ -0.33
POLR2J3-215ENST00000511313 STK26Q9P289 416 aa12.99□□□□□ -0.33
POLR2J3-215ENST00000511313 ANP32CO43423 234 aa12.99□□□□□ -0.33
POLR2J3-215ENST00000511313 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-215ENST00000511313 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-215ENST00000511313 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-215ENST00000511313 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
POLR2J3-215ENST00000511313 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
POLR2J3-215ENST00000511313 NPATQ14207 1427 aa12.97□□□□□ -0.33
POLR2J3-215ENST00000511313 ATP7AQ04656 1500 aa12.95□□□□□ -0.34
POLR2J3-215ENST00000511313 MYO5CQ9NQX4 1742 aa12.95□□□□□ -0.34
POLR2J3-215ENST00000511313 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-215ENST00000511313 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
POLR2J3-215ENST00000511313 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-215ENST00000511313 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-215ENST00000511313 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-215ENST00000511313 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
POLR2J3-215ENST00000511313 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
POLR2J3-215ENST00000511313 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
POLR2J3-215ENST00000511313 PTPRKQ15262 1439 aa12.91□□□□□ -0.34
POLR2J3-215ENST00000511313 NEFLP07196 543 aa12.9□□□□□ -0.34
POLR2J3-215ENST00000511313 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
POLR2J3-215ENST00000511313 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
POLR2J3-215ENST00000511313 KCNA6P17658 529 aa12.9□□□□□ -0.34
POLR2J3-215ENST00000511313 PTPN23Q9H3S7 1636 aa12.89□□□□□ -0.35
POLR2J3-215ENST00000511313 CALD1Q05682 793 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-215ENST00000511313 NLRP13Q86W25 1043 aa12.89□□□□□ -0.35
POLR2J3-215ENST00000511313 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
POLR2J3-215ENST00000511313 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
POLR2J3-215ENST00000511313 C19orf44Q9H6X5 657 aa12.87□□□□□ -0.35
POLR2J3-215ENST00000511313 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
POLR2J3-215ENST00000511313 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
POLR2J3-215ENST00000511313 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-215ENST00000511313 DIP2BQ9P265 1576 aa12.87□□□□□ -0.35
POLR2J3-215ENST00000511313 ADCY10Q96PN6 1610 aa12.86□□□□□ -0.35
POLR2J3-215ENST00000511313 ABCC5O15440 1437 aa12.86□□□□□ -0.35
POLR2J3-215ENST00000511313 PIK3R4Q99570 1358 aa12.86□□□□□ -0.35
POLR2J3-215ENST00000511313 NPHP1O15259 732 aa12.86□□□□□ -0.35
POLR2J3-215ENST00000511313 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-215ENST00000511313 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
POLR2J3-215ENST00000511313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 COG3Q96JB2 828 aa12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 NCOA1Q15788 1441 aa12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 AMPHP49418 695 aa12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
POLR2J3-215ENST00000511313 AGLP35573 1532 aa12.84□□□□□ -0.35
POLR2J3-215ENST00000511313 CGNL1Q0VF96 1302 aa12.84□□□□□ -0.35
POLR2J3-215ENST00000511313 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
POLR2J3-215ENST00000511313 ATAD2Q6PL18 1390 aa12.84□□□□□ -0.35
POLR2J3-215ENST00000511313 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-215ENST00000511313 KDM5DQ9BY66 1539 aa12.83□□□□□ -0.36
POLR2J3-215ENST00000511313 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
POLR2J3-215ENST00000511313 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
POLR2J3-215ENST00000511313 HDAC5Q9UQL6 1122 aa12.82□□□□□ -0.36
POLR2J3-215ENST00000511313 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
POLR2J3-215ENST00000511313 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-215ENST00000511313 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms