RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 EIF2AK4Q9P2K8 1649 aaKnown RBP17.32■□□□□ 0.36
SGCA-207ENST00000511303 UNC13BO14795 1591 aa17.32■□□□□ 0.36
SGCA-207ENST00000511303 ANKRD30BQ9BXX2 1392 aa17.32■□□□□ 0.36
SGCA-207ENST00000511303 ATP10AO60312 1499 aa17.31■□□□□ 0.36
SGCA-207ENST00000511303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
SGCA-207ENST00000511303 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SGCA-207ENST00000511303 FRMPD1Q5SYB0 1578 aa17.31■□□□□ 0.36
SGCA-207ENST00000511303 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
SGCA-207ENST00000511303 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
SGCA-207ENST00000511303 YEATS2Q9ULM3 1422 aa17.28■□□□□ 0.36
SGCA-207ENST00000511303 DIP2CQ9Y2E4 1556 aa17.28■□□□□ 0.36
SGCA-207ENST00000511303 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.36
SGCA-207ENST00000511303 REREQ9P2R6 1566 aa17.27■□□□□ 0.35
SGCA-207ENST00000511303 DEPDC5O75140 1603 aa17.26■□□□□ 0.35
SGCA-207ENST00000511303 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
SGCA-207ENST00000511303 BCORL1Q5H9F3 1711 aa17.26■□□□□ 0.35
SGCA-207ENST00000511303 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
SGCA-207ENST00000511303 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
SGCA-207ENST00000511303 VWDEQ8N2E2 1590 aa17.24■□□□□ 0.35
SGCA-207ENST00000511303 AGLP35573 1532 aa17.24■□□□□ 0.35
SGCA-207ENST00000511303 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
SGCA-207ENST00000511303 FOXD1Q16676 465 aa17.23■□□□□ 0.35
SGCA-207ENST00000511303 LMTK2Q8IWU2 1503 aa17.22■□□□□ 0.35
SGCA-207ENST00000511303 RNF17Q9BXT8 1623 aaKnown RBP17.22■□□□□ 0.35
SGCA-207ENST00000511303 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
SGCA-207ENST00000511303 GGT6Q6P531 493 aa17.21■□□□□ 0.35
SGCA-207ENST00000511303 RPRD2Q5VT52 1461 aaKnown RBP17.2■□□□□ 0.34
SGCA-207ENST00000511303 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
SGCA-207ENST00000511303 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
SGCA-207ENST00000511303 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
SGCA-207ENST00000511303 ARHGEF40Q8TER5 1519 aa17.17■□□□□ 0.34
SGCA-207ENST00000511303 PTPRTO14522 1441 aa17.16■□□□□ 0.34
SGCA-207ENST00000511303 TET3O43151 1660 aa17.15■□□□□ 0.34
SGCA-207ENST00000511303 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
SGCA-207ENST00000511303 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
SGCA-207ENST00000511303 PLA2R1Q13018 1463 aa17.13■□□□□ 0.33
SGCA-207ENST00000511303 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
SGCA-207ENST00000511303 L3MBTL2Q969R5 705 aa17.11■□□□□ 0.33
SGCA-207ENST00000511303 ABCC3O15438 1527 aa17.11■□□□□ 0.33
SGCA-207ENST00000511303 EFCAB6Q5THR3 1501 aa17.1■□□□□ 0.33
SGCA-207ENST00000511303 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
SGCA-207ENST00000511303 NPATQ14207 1427 aa17.07■□□□□ 0.32
SGCA-207ENST00000511303 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
SGCA-207ENST00000511303 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
SGCA-207ENST00000511303 E9PCH4 1651 aa17.07■□□□□ 0.32
SGCA-207ENST00000511303 TRPM2O94759 1503 aa17.06■□□□□ 0.32
SGCA-207ENST00000511303 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
SGCA-207ENST00000511303 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
SGCA-207ENST00000511303 NOS1P29475 1434 aa17.04■□□□□ 0.32
SGCA-207ENST00000511303 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.32
SGCA-207ENST00000511303 MLECQ14165 292 aa17■□□□□ 0.31
SGCA-207ENST00000511303 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
SGCA-207ENST00000511303 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
SGCA-207ENST00000511303 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
SGCA-207ENST00000511303 CEP152O94986 1710 aa16.99■□□□□ 0.31
SGCA-207ENST00000511303 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
SGCA-207ENST00000511303 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
SGCA-207ENST00000511303 ZMYM3Q14202 1370 aa16.98■□□□□ 0.31
SGCA-207ENST00000511303 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
SGCA-207ENST00000511303 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
SGCA-207ENST00000511303 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
SGCA-207ENST00000511303 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
SGCA-207ENST00000511303 IDI1Q13907 227 aa16.93■□□□□ 0.3
SGCA-207ENST00000511303 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
SGCA-207ENST00000511303 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
SGCA-207ENST00000511303 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
SGCA-207ENST00000511303 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
SGCA-207ENST00000511303 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
SGCA-207ENST00000511303 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.3
SGCA-207ENST00000511303 PRAG1Q86YV5 1406 aa16.88■□□□□ 0.29
SGCA-207ENST00000511303 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
SGCA-207ENST00000511303 SYNMO15061 1565 aa16.88■□□□□ 0.29
SGCA-207ENST00000511303 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
SGCA-207ENST00000511303 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
SGCA-207ENST00000511303 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
SGCA-207ENST00000511303 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
SGCA-207ENST00000511303 PREX1Q8TCU6 1659 aa16.87■□□□□ 0.29
SGCA-207ENST00000511303 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
SGCA-207ENST00000511303 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
SGCA-207ENST00000511303 ZNF326Q5BKZ1 582 aaKnown RBP16.86■□□□□ 0.29
SGCA-207ENST00000511303 TNRQ92752 1358 aa16.85■□□□□ 0.29
SGCA-207ENST00000511303 MYOM2P54296 1465 aa16.85■□□□□ 0.29
SGCA-207ENST00000511303 RALGAPBQ86X10 1494 aa16.85■□□□□ 0.29
SGCA-207ENST00000511303 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
SGCA-207ENST00000511303 KIF1BO60333 1816 aa16.84■□□□□ 0.29
SGCA-207ENST00000511303 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
SGCA-207ENST00000511303 HDGFP51858 240 aaKnown RBP16.83■□□□□ 0.28
SGCA-207ENST00000511303 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.28
SGCA-207ENST00000511303 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
SGCA-207ENST00000511303 STAG3Q9UJ98 1225 aa16.83■□□□□ 0.28
SGCA-207ENST00000511303 NLRP1Q9C000 1473 aa16.81■□□□□ 0.28
SGCA-207ENST00000511303 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
SGCA-207ENST00000511303 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
SGCA-207ENST00000511303 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
SGCA-207ENST00000511303 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
SGCA-207ENST00000511303 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
SGCA-207ENST00000511303 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
SGCA-207ENST00000511303 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
SGCA-207ENST00000511303 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
SGCA-207ENST00000511303 CEBPAP49715 358 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms