RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ARID4BQ4LE39 1312 aaPredicted RBP8.19□□□□□ -1.1
PROM1-211ENST00000511153 RRBP1Q9P2E9 1410 aaKnown RBP8.18□□□□□ -1.1
PROM1-211ENST00000511153 DNMT1P26358 1616 aaKnown RBP8.18□□□□□ -1.1
PROM1-211ENST00000511153 ZNF518AQ6AHZ1 1483 aa8.18□□□□□ -1.1
PROM1-211ENST00000511153 PLEKHH2Q8IVE3 1493 aa8.18□□□□□ -1.1
PROM1-211ENST00000511153 C9orf84Q5VXU9 1444 aa8.18□□□□□ -1.1
PROM1-211ENST00000511153 KIAA1107Q9UPP5 1409 aa8.18□□□□□ -1.1
PROM1-211ENST00000511153 ZFYVE16Q7Z3T8 1539 aa8.18□□□□□ -1.1
PROM1-211ENST00000511153 KIDINS220Q9ULH0 1771 aa8.18□□□□□ -1.1
PROM1-211ENST00000511153 ABCA6Q8N139 1617 aa8.17□□□□□ -1.1
PROM1-211ENST00000511153 HECW2Q9P2P5 1572 aa8.17□□□□□ -1.1
PROM1-211ENST00000511153 CROCC2H7BZ55 1655 aa8.17□□□□□ -1.1
PROM1-211ENST00000511153 PCGF6Q9BYE7 350 aa8.17□□□□□ -1.1
PROM1-211ENST00000511153 SIGLEC1Q9BZZ2 1709 aa8.17□□□□□ -1.1
PROM1-211ENST00000511153 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
PROM1-211ENST00000511153 FBXO3Q9UK99 471 aa8.16□□□□□ -1.1
PROM1-211ENST00000511153 ARHGEF5Q12774 1597 aa8.16□□□□□ -1.1
PROM1-211ENST00000511153 KDM5CP41229 1560 aa8.15□□□□□ -1.1
PROM1-211ENST00000511153 INO80Q9ULG1 1556 aaPredicted RBP8.15□□□□□ -1.11
PROM1-211ENST00000511153 DIP2CQ9Y2E4 1556 aa8.15□□□□□ -1.11
PROM1-211ENST00000511153 RTN4Q9NQC3 1192 aaKnown RBP8.14□□□□□ -1.11
PROM1-211ENST00000511153 ADGBQ8N7X0 1667 aa8.14□□□□□ -1.11
PROM1-211ENST00000511153 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
PROM1-211ENST00000511153 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
PROM1-211ENST00000511153 GGT6Q6P531 493 aa8.14□□□□□ -1.11
PROM1-211ENST00000511153 ZMYM4Q5VZL5 1548 aa8.14□□□□□ -1.11
PROM1-211ENST00000511153 ARHGEF40Q8TER5 1519 aa8.14□□□□□ -1.11
PROM1-211ENST00000511153 KIF3BO15066 747 aa8.13□□□□□ -1.11
PROM1-211ENST00000511153 VASPP50552 380 aaPredicted RBP8.13□□□□□ -1.11
PROM1-211ENST00000511153 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
PROM1-211ENST00000511153 MLH3Q9UHC1 1453 aa8.12□□□□□ -1.11
PROM1-211ENST00000511153 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
PROM1-211ENST00000511153 RSPH4AQ5TD94 716 aa8.12□□□□□ -1.11
PROM1-211ENST00000511153 ATP10AO60312 1499 aa8.12□□□□□ -1.11
PROM1-211ENST00000511153 A2MP01023 1474 aa8.12□□□□□ -1.11
PROM1-211ENST00000511153 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
PROM1-211ENST00000511153 MAST1Q9Y2H9 1570 aa8.11□□□□□ -1.11
PROM1-211ENST00000511153 NCOA1Q15788 1441 aa8.11□□□□□ -1.11
PROM1-211ENST00000511153 IFNLR1Q8IU57 520 aaPredicted RBP8.1□□□□□ -1.11
PROM1-211ENST00000511153 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
PROM1-211ENST00000511153 SHANK2Q9UPX8 1470 aa8.1□□□□□ -1.11
PROM1-211ENST00000511153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.1□□□□□ -1.11
PROM1-211ENST00000511153 RTEL1-TNFRSF6BF6WH68 1400 aa8.09□□□□□ -1.11
PROM1-211ENST00000511153 MAGI2Q86UL8 1455 aa8.09□□□□□ -1.11
PROM1-211ENST00000511153 REM2Q8IYK8 340 aaPredicted RBP8.09□□□□□ -1.11
PROM1-211ENST00000511153 AKT1S1Q96B36 256 aa8.09□□□□□ -1.11
PROM1-211ENST00000511153 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
PROM1-211ENST00000511153 CFAP65Q6ZU64 1925 aaKnown RBP8.09□□□□□ -1.12
PROM1-211ENST00000511153 DHX29Q7Z478 1369 aaKnown RBP8.08□□□□□ -1.12
PROM1-211ENST00000511153 NAIPQ13075 1403 aa8.08□□□□□ -1.12
PROM1-211ENST00000511153 ANKRD50Q9ULJ7 1429 aa8.08□□□□□ -1.12
PROM1-211ENST00000511153 ADGRL2O95490 1459 aa8.08□□□□□ -1.12
PROM1-211ENST00000511153 DUOX2Q9NRD8 1548 aa8.07□□□□□ -1.12
PROM1-211ENST00000511153 CEBPAP49715 358 aaPredicted RBP8.07□□□□□ -1.12
PROM1-211ENST00000511153 RAB3GAP2Q9H2M9 1393 aa8.06□□□□□ -1.12
PROM1-211ENST00000511153 GCC2Q8IWJ2 1684 aa8.06□□□□□ -1.12
PROM1-211ENST00000511153 CEP152O94986 1710 aa8.06□□□□□ -1.12
PROM1-211ENST00000511153 KDM4FA0A1W2PPD8 638 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 ESF1Q9H501 851 aaKnown RBP8.05□□□□□ -1.12
PROM1-211ENST00000511153 CLEC11AQ9Y240 323 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 ROCK1Q13464 1354 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 RIMS1Q86UR5 1692 aaKnown RBP8.05□□□□□ -1.12
PROM1-211ENST00000511153 BCORL1Q5H9F3 1711 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 CLTCQ00610 1675 aaKnown RBP8.05□□□□□ -1.12
PROM1-211ENST00000511153 MADDQ8WXG6 1647 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 HFM1A2PYH4 1435 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 SETD5Q9C0A6 1442 aa8.05□□□□□ -1.12
PROM1-211ENST00000511153 FER1L4A9Z1Z3 1794 aa8.04□□□□□ -1.12
PROM1-211ENST00000511153 NUP155O75694 1391 aa8.04□□□□□ -1.12
PROM1-211ENST00000511153 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
PROM1-211ENST00000511153 ERBINQ96RT1 1412 aa8.03□□□□□ -1.12
PROM1-211ENST00000511153 MROH1Q8NDA8 1641 aa8.03□□□□□ -1.12
PROM1-211ENST00000511153 FBXO31Q5XUX0 539 aaPredicted RBP8.02□□□□□ -1.13
PROM1-211ENST00000511153 LMTK3Q96Q04 1460 aa8.02□□□□□ -1.13
PROM1-211ENST00000511153 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
PROM1-211ENST00000511153 AMER1Q5JTC6 1135 aaPredicted RBP8.01□□□□□ -1.13
PROM1-211ENST00000511153 MIER1Q8N108 512 aa8.01□□□□□ -1.13
PROM1-211ENST00000511153 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
PROM1-211ENST00000511153 AGLP35573 1532 aa8.01□□□□□ -1.13
PROM1-211ENST00000511153 EIF2AK4Q9P2K8 1649 aaKnown RBP8.01□□□□□ -1.13
PROM1-211ENST00000511153 PITPNM1O00562 1244 aa8.01□□□□□ -1.13
PROM1-211ENST00000511153 ADAMTSL3P82987 1691 aa8□□□□□ -1.13
PROM1-211ENST00000511153 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
PROM1-211ENST00000511153 KANK1Q14678 1352 aa8□□□□□ -1.13
PROM1-211ENST00000511153 ABCC3O15438 1527 aa8□□□□□ -1.13
PROM1-211ENST00000511153 PLCD3Q8N3E9 789 aa8□□□□□ -1.13
PROM1-211ENST00000511153 SPDYE1Q8NFV5 336 aaPredicted RBP8□□□□□ -1.13
PROM1-211ENST00000511153 UNC13BO14795 1591 aa8□□□□□ -1.13
PROM1-211ENST00000511153 DEPDC5O75140 1603 aa7.99□□□□□ -1.13
PROM1-211ENST00000511153 PKD2Q13563 968 aa7.99□□□□□ -1.13
PROM1-211ENST00000511153 MPHOSPH9Q99550 1183 aa7.99□□□□□ -1.13
PROM1-211ENST00000511153 ZMYM3Q14202 1370 aa7.99□□□□□ -1.13
PROM1-211ENST00000511153 KDM5DQ9BY66 1539 aa7.99□□□□□ -1.13
PROM1-211ENST00000511153 PZPP20742 1482 aa7.98□□□□□ -1.13
PROM1-211ENST00000511153 C3P01024 1663 aa7.98□□□□□ -1.13
PROM1-211ENST00000511153 PRDM15P57071 1507 aaPredicted RBP7.98□□□□□ -1.13
PROM1-211ENST00000511153 FAM135AQ9P2D6 1515 aa7.98□□□□□ -1.13
PROM1-211ENST00000511153 CAMSAP1Q5T5Y3 1602 aa7.98□□□□□ -1.13
PROM1-211ENST00000511153 CHGAP10645 457 aaKnown RBP7.97□□□□□ -1.13
PROM1-211ENST00000511153 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms