RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 DUOX2Q9NRD8 1548 aa11.69□□□□□ -0.54
SMAD1-209ENST00000511125 MLH3Q9UHC1 1453 aa11.68□□□□□ -0.54
SMAD1-209ENST00000511125 CFAP65Q6ZU64 1925 aaKnown RBP11.68□□□□□ -0.54
SMAD1-209ENST00000511125 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
SMAD1-209ENST00000511125 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
SMAD1-209ENST00000511125 GCC2Q8IWJ2 1684 aa11.68□□□□□ -0.54
SMAD1-209ENST00000511125 RICTORQ6R327 1708 aa11.68□□□□□ -0.54
SMAD1-209ENST00000511125 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
SMAD1-209ENST00000511125 PZPP20742 1482 aa11.67□□□□□ -0.54
SMAD1-209ENST00000511125 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-209ENST00000511125 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-209ENST00000511125 KDM5CP41229 1560 aa11.66□□□□□ -0.54
SMAD1-209ENST00000511125 KANK1Q14678 1352 aa11.66□□□□□ -0.54
SMAD1-209ENST00000511125 HIRIP3Q9BW71 556 aaPredicted RBP11.65□□□□□ -0.54
SMAD1-209ENST00000511125 MAST1Q9Y2H9 1570 aa11.65□□□□□ -0.54
SMAD1-209ENST00000511125 ATP10AO60312 1499 aa11.65□□□□□ -0.54
SMAD1-209ENST00000511125 DIP2CQ9Y2E4 1556 aa11.65□□□□□ -0.55
SMAD1-209ENST00000511125 ERBINQ96RT1 1412 aa11.64□□□□□ -0.55
SMAD1-209ENST00000511125 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
SMAD1-209ENST00000511125 PLXNC1O60486 1568 aa11.63□□□□□ -0.55
SMAD1-209ENST00000511125 FAM135AQ9P2D6 1515 aa11.63□□□□□ -0.55
SMAD1-209ENST00000511125 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
SMAD1-209ENST00000511125 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
SMAD1-209ENST00000511125 ANKRD30BQ9BXX2 1392 aa11.61□□□□□ -0.55
SMAD1-209ENST00000511125 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
SMAD1-209ENST00000511125 SIGLEC1Q9BZZ2 1709 aa11.59□□□□□ -0.55
SMAD1-209ENST00000511125 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
SMAD1-209ENST00000511125 MAGI2Q86UL8 1455 aa11.57□□□□□ -0.56
SMAD1-209ENST00000511125 UGGT1Q9NYU2 1555 aa11.56□□□□□ -0.56
SMAD1-209ENST00000511125 ZMYM4Q5VZL5 1548 aa11.56□□□□□ -0.56
SMAD1-209ENST00000511125 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
SMAD1-209ENST00000511125 IDI1Q13907 227 aa11.55□□□□□ -0.56
SMAD1-209ENST00000511125 CEP152O94986 1710 aa11.55□□□□□ -0.56
SMAD1-209ENST00000511125 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
SMAD1-209ENST00000511125 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
SMAD1-209ENST00000511125 NPATQ14207 1427 aa11.54□□□□□ -0.56
SMAD1-209ENST00000511125 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
SMAD1-209ENST00000511125 ARHGEF40Q8TER5 1519 aa11.54□□□□□ -0.56
SMAD1-209ENST00000511125 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
SMAD1-209ENST00000511125 NBPF8Q3BBV2 869 aa11.54□□□□□ -0.56
SMAD1-209ENST00000511125 MROH1Q8NDA8 1641 aa11.53□□□□□ -0.56
SMAD1-209ENST00000511125 UNC13BO14795 1591 aa11.53□□□□□ -0.56
SMAD1-209ENST00000511125 BCANQ96GW7 911 aa11.52□□□□□ -0.57
SMAD1-209ENST00000511125 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.57
SMAD1-209ENST00000511125 ABCC3O15438 1527 aa11.51□□□□□ -0.57
SMAD1-209ENST00000511125 IQGAP3Q86VI3 1631 aa11.5□□□□□ -0.57
SMAD1-209ENST00000511125 E9PCH4 1651 aa11.5□□□□□ -0.57
SMAD1-209ENST00000511125 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
SMAD1-209ENST00000511125 POLR3GLQ9BT43 218 aa11.5□□□□□ -0.57
SMAD1-209ENST00000511125 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
SMAD1-209ENST00000511125 KDM5DQ9BY66 1539 aa11.48□□□□□ -0.57
SMAD1-209ENST00000511125 NBPF1Q3BBV0 1214 aa11.48□□□□□ -0.57
SMAD1-209ENST00000511125 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
SMAD1-209ENST00000511125 EIF2AK4Q9P2K8 1649 aaKnown RBP11.48□□□□□ -0.57
SMAD1-209ENST00000511125 DEPDC5O75140 1603 aa11.47□□□□□ -0.57
SMAD1-209ENST00000511125 EFCAB6Q5THR3 1501 aa11.46□□□□□ -0.58
SMAD1-209ENST00000511125 ADGRF5Q8IZF2 1346 aa11.46□□□□□ -0.58
SMAD1-209ENST00000511125 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
SMAD1-209ENST00000511125 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
SMAD1-209ENST00000511125 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
SMAD1-209ENST00000511125 TET3O43151 1660 aa11.45□□□□□ -0.58
SMAD1-209ENST00000511125 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
SMAD1-209ENST00000511125 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
SMAD1-209ENST00000511125 AGLP35573 1532 aa11.44□□□□□ -0.58
SMAD1-209ENST00000511125 CAMSAP1Q5T5Y3 1602 aa11.44□□□□□ -0.58
SMAD1-209ENST00000511125 KDM4FA0A1W2PPD8 638 aa11.43□□□□□ -0.58
SMAD1-209ENST00000511125 CARD11Q9BXL7 1154 aa11.43□□□□□ -0.58
SMAD1-209ENST00000511125 STK26Q9P289 416 aa11.43□□□□□ -0.58
SMAD1-209ENST00000511125 PPP6R1Q9UPN7 881 aa11.43□□□□□ -0.58
SMAD1-209ENST00000511125 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
SMAD1-209ENST00000511125 SAFB2Q14151 953 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMAD1-209ENST00000511125 SLC52A1Q9NWF4 448 aa11.42□□□□□ -0.58
SMAD1-209ENST00000511125 TNRQ92752 1358 aa11.42□□□□□ -0.58
SMAD1-209ENST00000511125 PTPRTO14522 1441 aa11.42□□□□□ -0.58
SMAD1-209ENST00000511125 HSPA2P54652 639 aa11.41□□□□□ -0.58
SMAD1-209ENST00000511125 MADDQ8WXG6 1647 aa11.41□□□□□ -0.58
SMAD1-209ENST00000511125 ERVK-7P63135 1459 aa11.4□□□□□ -0.58
SMAD1-209ENST00000511125 NOS1P29475 1434 aa11.4□□□□□ -0.58
SMAD1-209ENST00000511125 SPHKAPQ2M3C7 1700 aa11.4□□□□□ -0.58
SMAD1-209ENST00000511125 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
SMAD1-209ENST00000511125 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
SMAD1-209ENST00000511125 LMTK2Q8IWU2 1503 aa11.4□□□□□ -0.59
SMAD1-209ENST00000511125 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.59
SMAD1-209ENST00000511125 SLC26A8Q96RN1 970 aa11.4□□□□□ -0.59
SMAD1-209ENST00000511125 RIMS1Q86UR5 1692 aaKnown RBP11.39□□□□□ -0.59
SMAD1-209ENST00000511125 REREQ9P2R6 1566 aa11.39□□□□□ -0.59
SMAD1-209ENST00000511125 SYNMO15061 1565 aa11.39□□□□□ -0.59
SMAD1-209ENST00000511125 TRPM2O94759 1503 aa11.39□□□□□ -0.59
SMAD1-209ENST00000511125 TXNDC2Q86VQ3 553 aa11.38□□□□□ -0.59
SMAD1-209ENST00000511125 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
SMAD1-209ENST00000511125 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
SMAD1-209ENST00000511125 ROCK2O75116 1388 aaKnown RBP11.38□□□□□ -0.59
SMAD1-209ENST00000511125 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
SMAD1-209ENST00000511125 LTKP29376 864 aa11.37□□□□□ -0.59
SMAD1-209ENST00000511125 FER1L4A9Z1Z3 1794 aa11.37□□□□□ -0.59
SMAD1-209ENST00000511125 ARHGAP31Q2M1Z3 1444 aa11.37□□□□□ -0.59
SMAD1-209ENST00000511125 BCORL1Q5H9F3 1711 aa11.36□□□□□ -0.59
SMAD1-209ENST00000511125 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
SMAD1-209ENST00000511125 EIF4G2P78344 907 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMAD1-209ENST00000511125 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms