RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 MAP2K5Q13163 448 aa11.71□□□□□ -0.53
CHD1-206ENST00000511067 GNPATO15228 680 aa11.7□□□□□ -0.54
CHD1-206ENST00000511067 PHF14O94880 888 aa11.7□□□□□ -0.54
CHD1-206ENST00000511067 KRTAP3-3Q9BYR6 98 aa11.7□□□□□ -0.54
CHD1-206ENST00000511067 KRTAP3-2Q9BYR7 98 aa11.7□□□□□ -0.54
CHD1-206ENST00000511067 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
CHD1-206ENST00000511067 TRIM66O15016 1216 aa11.69□□□□□ -0.54
CHD1-206ENST00000511067 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
CHD1-206ENST00000511067 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
CHD1-206ENST00000511067 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
CHD1-206ENST00000511067 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
CHD1-206ENST00000511067 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
CHD1-206ENST00000511067 PTGDRQ13258 359 aa11.66□□□□□ -0.54
CHD1-206ENST00000511067 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
CHD1-206ENST00000511067 IRF6O14896 467 aa11.65□□□□□ -0.54
CHD1-206ENST00000511067 PDE4DQ08499 809 aa11.65□□□□□ -0.54
CHD1-206ENST00000511067 LHX6Q9UPM6 363 aa11.65□□□□□ -0.54
CHD1-206ENST00000511067 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
CHD1-206ENST00000511067 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
CHD1-206ENST00000511067 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
CHD1-206ENST00000511067 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
CHD1-206ENST00000511067 PCDHGA10Q9Y5H3 936 aa11.63□□□□□ -0.55
CHD1-206ENST00000511067 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
CHD1-206ENST00000511067 MAP3K7O43318 606 aa11.61□□□□□ -0.55
CHD1-206ENST00000511067 AMHR2Q16671 573 aa11.61□□□□□ -0.55
CHD1-206ENST00000511067 GPBP1L1Q9HC44 474 aaPredicted RBP11.61□□□□□ -0.55
CHD1-206ENST00000511067 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
CHD1-206ENST00000511067 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
CHD1-206ENST00000511067 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
CHD1-206ENST00000511067 FECHP22830 423 aa11.58□□□□□ -0.56
CHD1-206ENST00000511067 FOSBP53539 338 aa11.58□□□□□ -0.56
CHD1-206ENST00000511067 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
CHD1-206ENST00000511067 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
CHD1-206ENST00000511067 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
CHD1-206ENST00000511067 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
CHD1-206ENST00000511067 PBX2P40425 430 aa11.54□□□□□ -0.56
CHD1-206ENST00000511067 TSR1Q2NL82 804 aaKnown RBP11.53□□□□□ -0.56
CHD1-206ENST00000511067 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
CHD1-206ENST00000511067 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
CHD1-206ENST00000511067 PARP9Q8IXQ6 854 aa11.52□□□□□ -0.57
CHD1-206ENST00000511067 ZNF454Q8N9F8 522 aa11.51□□□□□ -0.57
CHD1-206ENST00000511067 LSM11P83369 360 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHD1-206ENST00000511067 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
CHD1-206ENST00000511067 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
CHD1-206ENST00000511067 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
CHD1-206ENST00000511067 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
CHD1-206ENST00000511067 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
CHD1-206ENST00000511067 TIMELESSQ9UNS1 1208 aa11.49□□□□□ -0.57
CHD1-206ENST00000511067 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
CHD1-206ENST00000511067 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
CHD1-206ENST00000511067 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
CHD1-206ENST00000511067 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
CHD1-206ENST00000511067 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
CHD1-206ENST00000511067 FAM117AQ9C073 453 aa11.45□□□□□ -0.58
CHD1-206ENST00000511067 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
CHD1-206ENST00000511067 GIGYF2Q6Y7W6 1299 aaKnown RBP11.43□□□□□ -0.58
CHD1-206ENST00000511067 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
CHD1-206ENST00000511067 KCNH8Q96L42 1107 aa11.43□□□□□ -0.58
CHD1-206ENST00000511067 OATP04181 439 aa11.42□□□□□ -0.58
CHD1-206ENST00000511067 CLCN1P35523 988 aa11.42□□□□□ -0.58
CHD1-206ENST00000511067 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
CHD1-206ENST00000511067 RNF166Q96A37 237 aaPredicted RBP11.42□□□□□ -0.58
CHD1-206ENST00000511067 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
CHD1-206ENST00000511067 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
CHD1-206ENST00000511067 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
CHD1-206ENST00000511067 PSEN2P49810 448 aa11.39□□□□□ -0.59
CHD1-206ENST00000511067 PRSS12P56730 875 aa11.39□□□□□ -0.59
CHD1-206ENST00000511067 METTL3Q86U44 580 aaKnown RBP11.39□□□□□ -0.59
CHD1-206ENST00000511067 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
CHD1-206ENST00000511067 ADGRG1Q9Y653 693 aa11.39□□□□□ -0.59
CHD1-206ENST00000511067 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
CHD1-206ENST00000511067 KCNK17Q96T54 332 aa11.38□□□□□ -0.59
CHD1-206ENST00000511067 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
CHD1-206ENST00000511067 REPIN1Q9BWE0 567 aaKnown RBP11.37□□□□□ -0.59
CHD1-206ENST00000511067 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
CHD1-206ENST00000511067 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
CHD1-206ENST00000511067 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
CHD1-206ENST00000511067 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
CHD1-206ENST00000511067 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
CHD1-206ENST00000511067 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
CHD1-206ENST00000511067 PHOX2BQ99453 314 aa11.36□□□□□ -0.59
CHD1-206ENST00000511067 MS4A1P11836 297 aa11.35□□□□□ -0.59
CHD1-206ENST00000511067 PTPREP23469 700 aa11.34□□□□□ -0.59
CHD1-206ENST00000511067 TK2O00142 265 aa11.33□□□□□ -0.6
CHD1-206ENST00000511067 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
CHD1-206ENST00000511067 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
CHD1-206ENST00000511067 COL9A1P20849 921 aa11.31□□□□□ -0.6
CHD1-206ENST00000511067 SSTR3P32745 418 aaPredicted RBP11.3□□□□□ -0.6
CHD1-206ENST00000511067 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
CHD1-206ENST00000511067 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
CHD1-206ENST00000511067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.29□□□□□ -0.6
CHD1-206ENST00000511067 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
CHD1-206ENST00000511067 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CHD1-206ENST00000511067 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
CHD1-206ENST00000511067 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
CHD1-206ENST00000511067 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
CHD1-206ENST00000511067 EYA1Q99502 592 aa11.26□□□□□ -0.61
CHD1-206ENST00000511067 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
CHD1-206ENST00000511067 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
CHD1-206ENST00000511067 HRO43593 1189 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms