RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 TONSLQ96HA7 1378 aa15.41■□□□□ 0.06
DHFR-205ENST00000511032 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
DHFR-205ENST00000511032 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
DHFR-205ENST00000511032 EIF2AK4Q9P2K8 1649 aaKnown RBP15.4■□□□□ 0.06
DHFR-205ENST00000511032 PZPP20742 1482 aa15.4■□□□□ 0.06
DHFR-205ENST00000511032 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
DHFR-205ENST00000511032 TSPOAP1O95153 1857 aa15.38■□□□□ 0.05
DHFR-205ENST00000511032 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
DHFR-205ENST00000511032 KANK1Q14678 1352 aa15.37■□□□□ 0.05
DHFR-205ENST00000511032 FAM135AQ9P2D6 1515 aa15.36■□□□□ 0.05
DHFR-205ENST00000511032 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
DHFR-205ENST00000511032 IQGAP3Q86VI3 1631 aa15.36■□□□□ 0.05
DHFR-205ENST00000511032 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
DHFR-205ENST00000511032 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
DHFR-205ENST00000511032 MAGI2Q86UL8 1455 aa15.35■□□□□ 0.05
DHFR-205ENST00000511032 RICTORQ6R327 1708 aa15.35■□□□□ 0.05
DHFR-205ENST00000511032 A2MP01023 1474 aa15.35■□□□□ 0.05
DHFR-205ENST00000511032 PKD2Q13563 968 aa15.34■□□□□ 0.05
DHFR-205ENST00000511032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.054e-9■□□□□ 9.5
DHFR-205ENST00000511032 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.05
DHFR-205ENST00000511032 DEPDC5O75140 1603 aa15.33■□□□□ 0.04
DHFR-205ENST00000511032 PPRC1Q5VV67 1664 aaKnown RBP15.32■□□□□ 0.04
DHFR-205ENST00000511032 ZMYM4Q5VZL5 1548 aa15.31■□□□□ 0.04
DHFR-205ENST00000511032 RPRD2Q5VT52 1461 aaKnown RBP15.31■□□□□ 0.04
DHFR-205ENST00000511032 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
DHFR-205ENST00000511032 KIF3BO15066 747 aa15.3■□□□□ 0.04
DHFR-205ENST00000511032 RAPGEF3O95398 923 aa15.29■□□□□ 0.04
DHFR-205ENST00000511032 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
DHFR-205ENST00000511032 ABCA6Q8N139 1617 aa15.29■□□□□ 0.04
DHFR-205ENST00000511032 PRDM15P57071 1507 aaPredicted RBP15.28■□□□□ 0.04
DHFR-205ENST00000511032 BCORL1Q5H9F3 1711 aa15.28■□□□□ 0.04
DHFR-205ENST00000511032 DIP2CQ9Y2E4 1556 aa15.27■□□□□ 0.03
DHFR-205ENST00000511032 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.03
DHFR-205ENST00000511032 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.03
DHFR-205ENST00000511032 TET3O43151 1660 aa15.27■□□□□ 0.03
DHFR-205ENST00000511032 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
DHFR-205ENST00000511032 FRMPD1Q5SYB0 1578 aa15.25■□□□□ 0.03
DHFR-205ENST00000511032 CCDC144AA2RUR9 1427 aa15.24■□□□□ 0.03
DHFR-205ENST00000511032 VWDEQ8N2E2 1590 aa15.23■□□□□ 0.03
DHFR-205ENST00000511032 ATP10AO60312 1499 aa15.21■□□□□ 0.03
DHFR-205ENST00000511032 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
DHFR-205ENST00000511032 LMTK2Q8IWU2 1503 aa15.21■□□□□ 0.02
DHFR-205ENST00000511032 ZC3H13Q5T200 1668 aaKnown RBP15.2■□□□□ 0.02
DHFR-205ENST00000511032 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
DHFR-205ENST00000511032 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
DHFR-205ENST00000511032 E9PCH4 1651 aa15.19■□□□□ 0.02
DHFR-205ENST00000511032 SPHKAPQ2M3C7 1700 aa15.19■□□□□ 0.02
DHFR-205ENST00000511032 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
DHFR-205ENST00000511032 YEATS2Q9ULM3 1422 aa15.18■□□□□ 0.02
DHFR-205ENST00000511032 GGT6Q6P531 493 aa15.18■□□□□ 0.02
DHFR-205ENST00000511032 L3MBTL2Q969R5 705 aa15.18■□□□□ 0.02
DHFR-205ENST00000511032 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
DHFR-205ENST00000511032 WASHC2CQ9Y4E1 1318 aa15.16■□□□□ 0.02
DHFR-205ENST00000511032 TRPM2O94759 1503 aa15.16■□□□□ 0.02
DHFR-205ENST00000511032 AGLP35573 1532 aa15.16■□□□□ 0.02
DHFR-205ENST00000511032 CEP152O94986 1710 aa15.16■□□□□ 0.02
DHFR-205ENST00000511032 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
DHFR-205ENST00000511032 PTPRTO14522 1441 aa15.13■□□□□ 0.01
DHFR-205ENST00000511032 ABCC3O15438 1527 aa15.13■□□□□ 0.01
DHFR-205ENST00000511032 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
DHFR-205ENST00000511032 PLA2R1Q13018 1463 aa15.11■□□□□ 0.01
DHFR-205ENST00000511032 STAC3Q96MF2 364 aa15.1■□□□□ 0.01
DHFR-205ENST00000511032 COL17A1Q9UMD9 1497 aaPredicted RBP15.09■□□□□ 0.01
DHFR-205ENST00000511032 CNTLNQ9NXG0 1405 aa15.09■□□□□ 0.01
DHFR-205ENST00000511032 NEURL4Q96JN8 1562 aa15.09■□□□□ 0.01
DHFR-205ENST00000511032 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0.01
DHFR-205ENST00000511032 ARHGAP31Q2M1Z3 1444 aa15.08■□□□□ 0
DHFR-205ENST00000511032 KIF1BO60333 1816 aa15.08■□□□□ 0
DHFR-205ENST00000511032 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0
DHFR-205ENST00000511032 ESF1Q9H501 851 aaKnown RBP15.08■□□□□ 0
DHFR-205ENST00000511032 UHRF1BP1Q6BDS2 1440 aa15.07■□□□□ 0
DHFR-205ENST00000511032 DCAF11Q8TEB1 546 aa15.07■□□□□ 0
DHFR-205ENST00000511032 NPATQ14207 1427 aa15.07■□□□□ 0
DHFR-205ENST00000511032 CLTCL1P53675 1640 aa15.06■□□□□ 0
DHFR-205ENST00000511032 EIF4G2P78344 907 aaKnown RBP eCLIP15.06■□□□□ 0
DHFR-205ENST00000511032 RNF39Q9H2S5 420 aa15.06■□□□□ 0
DHFR-205ENST00000511032 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
DHFR-205ENST00000511032 RGL3Q3MIN7 710 aa15.04■□□□□ -0
DHFR-205ENST00000511032 RALGAPBQ86X10 1494 aa15.03■□□□□ -0
DHFR-205ENST00000511032 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
DHFR-205ENST00000511032 SPATA31E1Q6ZUB1 1445 aa15.03■□□□□ -0
DHFR-205ENST00000511032 ARID4BQ4LE39 1312 aaPredicted RBP15.02■□□□□ -0
DHFR-205ENST00000511032 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
DHFR-205ENST00000511032 NOS1P29475 1434 aa15□□□□□ -0.01
DHFR-205ENST00000511032 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
DHFR-205ENST00000511032 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
DHFR-205ENST00000511032 PRAG1Q86YV5 1406 aa15□□□□□ -0.01
DHFR-205ENST00000511032 CFAP65Q6ZU64 1925 aaKnown RBP14.99□□□□□ -0.01
DHFR-205ENST00000511032 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
DHFR-205ENST00000511032 ROCK2O75116 1388 aaKnown RBP14.97□□□□□ -0.01
DHFR-205ENST00000511032 MLECQ14165 292 aa14.97□□□□□ -0.01
DHFR-205ENST00000511032 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
DHFR-205ENST00000511032 ADGRB3O60242 1522 aa14.97□□□□□ -0.01
DHFR-205ENST00000511032 RPGRIP1LQ68CZ1 1315 aa14.96□□□□□ -0.01
DHFR-205ENST00000511032 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
DHFR-205ENST00000511032 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.01
DHFR-205ENST00000511032 PIK3C2BO00750 1634 aa14.96□□□□□ -0.01
DHFR-205ENST00000511032 LAMC1P11047 1609 aa14.95□□□□□ -0.02
DHFR-205ENST00000511032 HSPA5P11021 654 aaKnown RBP14.95□□□□□ -0.02
DHFR-205ENST00000511032 UGGT1Q9NYU2 1555 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms