RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 TYW1BQ6NUM6 668 aa8.19□□□□□ -1.1
SMAD1-208ENST00000510948 RBM33Q96EV2 1170 aaKnown RBP8.19□□□□□ -1.1
SMAD1-208ENST00000510948 CDHR5Q9HBB8 845 aa8.19□□□□□ -1.1
SMAD1-208ENST00000510948 FBXW7Q969H0 707 aa8.18□□□□□ -1.1
SMAD1-208ENST00000510948 KDM4FA0A1W2PPD8 638 aa8.17□□□□□ -1.1
SMAD1-208ENST00000510948 GIGYF2Q6Y7W6 1299 aaKnown RBP8.17□□□□□ -1.1
SMAD1-208ENST00000510948 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
SMAD1-208ENST00000510948 GOPCQ9HD26 462 aa8.17□□□□□ -1.1
SMAD1-208ENST00000510948 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
SMAD1-208ENST00000510948 JPH4Q96JJ6 628 aa8.16□□□□□ -1.1
SMAD1-208ENST00000510948 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
SMAD1-208ENST00000510948 MS4A1P11836 297 aa8.15□□□□□ -1.1
SMAD1-208ENST00000510948 CLCN1P35523 988 aa8.15□□□□□ -1.1
SMAD1-208ENST00000510948 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
SMAD1-208ENST00000510948 CERKQ8TCT0 537 aa8.14□□□□□ -1.11
SMAD1-208ENST00000510948 FOSBP53539 338 aa8.13□□□□□ -1.11
SMAD1-208ENST00000510948 C6orf132Q5T0Z8 1188 aa8.13□□□□□ -1.11
SMAD1-208ENST00000510948 GPCPD1Q9NPB8 672 aa8.13□□□□□ -1.11
SMAD1-208ENST00000510948 OATP04181 439 aa8.12□□□□□ -1.11
SMAD1-208ENST00000510948 PHOX2BQ99453 314 aa8.12□□□□□ -1.11
SMAD1-208ENST00000510948 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-208ENST00000510948 MDM2Q00987 491 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-208ENST00000510948 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
SMAD1-208ENST00000510948 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
SMAD1-208ENST00000510948 FLIIQ13045 1269 aa8.1□□□□□ -1.11
SMAD1-208ENST00000510948 PCMTD1Q96MG8 357 aaPredicted RBP8.1□□□□□ -1.11
SMAD1-208ENST00000510948 RSPH6AQ9H0K4 717 aa8.1□□□□□ -1.11
SMAD1-208ENST00000510948 METTL3Q86U44 580 aaKnown RBP8.09□□□□□ -1.11
SMAD1-208ENST00000510948 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
SMAD1-208ENST00000510948 DOK7Q18PE1 504 aa8.08□□□□□ -1.12
SMAD1-208ENST00000510948 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
SMAD1-208ENST00000510948 PADI6Q6TGC4 694 aa8.08□□□□□ -1.12
SMAD1-208ENST00000510948 NUDT7P0C024 238 aa8.07□□□□□ -1.12
SMAD1-208ENST00000510948 FAM161AQ3B820 660 aa8.07□□□□□ -1.12
SMAD1-208ENST00000510948 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
SMAD1-208ENST00000510948 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
SMAD1-208ENST00000510948 ZSWIM6Q9HCJ5 1215 aa8.07□□□□□ -1.12
SMAD1-208ENST00000510948 RBM27Q9P2N5 1060 aaKnown RBP8.07□□□□□ -1.12
SMAD1-208ENST00000510948 ADGRG1Q9Y653 693 aa8.07□□□□□ -1.12
SMAD1-208ENST00000510948 HOXB3P14651 431 aaPredicted RBP8.06□□□□□ -1.12
SMAD1-208ENST00000510948 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
SMAD1-208ENST00000510948 BEGAINQ9BUH8 593 aa8.06□□□□□ -1.12
SMAD1-208ENST00000510948 FAM217BQ9NTX9 383 aaPredicted RBP8.06□□□□□ -1.12
SMAD1-208ENST00000510948 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
SMAD1-208ENST00000510948 PRSS12P56730 875 aa8.05□□□□□ -1.12
SMAD1-208ENST00000510948 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
SMAD1-208ENST00000510948 GPR153Q6NV75 609 aa8.05□□□□□ -1.12
SMAD1-208ENST00000510948 KHSRPQ92945 711 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMAD1-208ENST00000510948 ADAM33Q9BZ11 813 aa8.05□□□□□ -1.12
SMAD1-208ENST00000510948 ONECUT3O60422 494 aaPredicted RBP8.04□□□□□ -1.12
SMAD1-208ENST00000510948 POTEJP0CG39 1038 aa8.04□□□□□ -1.12
SMAD1-208ENST00000510948 RBM46Q8TBY0 533 aaKnown RBP8.03□□□□□ -1.12
SMAD1-208ENST00000510948 CDCA7LQ96GN5 454 aa8.03□□□□□ -1.12
SMAD1-208ENST00000510948 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
SMAD1-208ENST00000510948 ZNF710Q8N1W2 664 aa8.01□□□□□ -1.13
SMAD1-208ENST00000510948 POTEB2H3BUK9 544 aa8□□□□□ -1.13
SMAD1-208ENST00000510948 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
SMAD1-208ENST00000510948 LHX6Q9UPM6 363 aa8□□□□□ -1.13
SMAD1-208ENST00000510948 PSDA5PKW4 1024 aaPredicted RBP7.99□□□□□ -1.13
SMAD1-208ENST00000510948 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
SMAD1-208ENST00000510948 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
SMAD1-208ENST00000510948 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
SMAD1-208ENST00000510948 ATP1B4Q9UN42 357 aaPredicted RBP7.99□□□□□ -1.13
SMAD1-208ENST00000510948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.98□□□□□ -1.13
SMAD1-208ENST00000510948 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
SMAD1-208ENST00000510948 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
SMAD1-208ENST00000510948 MAMSTRQ6ZN01 415 aa7.98□□□□□ -1.13
SMAD1-208ENST00000510948 BCL2L12Q9HB09 334 aa7.98□□□□□ -1.13
SMAD1-208ENST00000510948 SCUBE2Q9NQ36 999 aa7.98□□□□□ -1.13
SMAD1-208ENST00000510948 COL9A1P20849 921 aa7.97□□□□□ -1.13
SMAD1-208ENST00000510948 EYA1Q99502 592 aa7.97□□□□□ -1.13
SMAD1-208ENST00000510948 FAM198AQ9UFP1 575 aa7.97□□□□□ -1.13
SMAD1-208ENST00000510948 RCCD1A6NED2 376 aa7.96□□□□□ -1.14
SMAD1-208ENST00000510948 A6NJR5 290 aa7.96□□□□□ -1.14
SMAD1-208ENST00000510948 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMAD1-208ENST00000510948 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
SMAD1-208ENST00000510948 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
SMAD1-208ENST00000510948 PTPREP23469 700 aa7.95□□□□□ -1.14
SMAD1-208ENST00000510948 UBTFP17480 764 aaKnown RBP7.94□□□□□ -1.14
SMAD1-208ENST00000510948 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
SMAD1-208ENST00000510948 MCM6Q14566 821 aa7.94□□□□□ -1.14
SMAD1-208ENST00000510948 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
SMAD1-208ENST00000510948 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
SMAD1-208ENST00000510948 APBB1O00213 710 aa7.93□□□□□ -1.14
SMAD1-208ENST00000510948 SNPHO15079 494 aa7.93□□□□□ -1.14
SMAD1-208ENST00000510948 NUDT18Q6ZVK8 323 aa7.93□□□□□ -1.14
SMAD1-208ENST00000510948 PACS2Q86VP3 889 aa7.93□□□□□ -1.14
SMAD1-208ENST00000510948 C1orf115Q9H7X2 142 aa7.93□□□□□ -1.14
SMAD1-208ENST00000510948 ARID3CA6NKF2 412 aa7.92□□□□□ -1.14
SMAD1-208ENST00000510948 TRAK2O60296 914 aa7.92□□□□□ -1.14
SMAD1-208ENST00000510948 CD46P15529 392 aa7.92□□□□□ -1.14
SMAD1-208ENST00000510948 SULF1Q8IWU6 871 aa7.92□□□□□ -1.14
SMAD1-208ENST00000510948 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
SMAD1-208ENST00000510948 TATDN2Q93075 761 aa7.92□□□□□ -1.14
SMAD1-208ENST00000510948 TRIM6-TRIM34B2RNG4 842 aa7.91□□□□□ -1.14
SMAD1-208ENST00000510948 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
SMAD1-208ENST00000510948 DNAJB2P25686 324 aa7.91□□□□□ -1.14
SMAD1-208ENST00000510948 PNMA3Q9UL41 463 aa7.91□□□□□ -1.14
SMAD1-208ENST00000510948 NBPF26B4DH59 902 aa7.9□□□□□ -1.14
SMAD1-208ENST00000510948 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms