RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PDE4AP27815 886 aa13.16□□□□□ -0.3
NEK1-206ENST00000510533 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
NEK1-206ENST00000510533 TNNT3P45378 269 aaPredicted RBP13.16□□□□□ -0.3
NEK1-206ENST00000510533 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
NEK1-206ENST00000510533 GOLGA6L1Q8N7Z2 621 aa13.15□□□□□ -0.3
NEK1-206ENST00000510533 KIF3BO15066 747 aa13.14□□□□□ -0.31
NEK1-206ENST00000510533 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
NEK1-206ENST00000510533 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
NEK1-206ENST00000510533 GSE1Q14687 1217 aa13.12□□□□□ -0.31
NEK1-206ENST00000510533 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
NEK1-206ENST00000510533 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
NEK1-206ENST00000510533 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
NEK1-206ENST00000510533 HNRNPMP52272 730 aaKnown RBP eCLIP13.12□□□□□ -0.318e-6■■■■□ 19.5
NEK1-206ENST00000510533 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
NEK1-206ENST00000510533 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
NEK1-206ENST00000510533 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
NEK1-206ENST00000510533 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 RASSF8Q8NHQ8 419 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 PANK3Q9H999 370 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
NEK1-206ENST00000510533 DHX57Q6P158 1386 aaKnown RBP13.11□□□□□ -0.31
NEK1-206ENST00000510533 ST20-MTHFSA0A0A6YYL1 179 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
NEK1-206ENST00000510533 HSP90AA2PQ14568 343 aaPredicted RBP13.11□□□□□ -0.31
NEK1-206ENST00000510533 PRKRIP1Q9H875 184 aaPredicted RBP13.11□□□□□ -0.31
NEK1-206ENST00000510533 E9PSI1 815 aa13.1□□□□□ -0.31
NEK1-206ENST00000510533 PLIN1O60240 522 aa13.1□□□□□ -0.31
NEK1-206ENST00000510533 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
NEK1-206ENST00000510533 TDRD9Q8NDG6 1382 aaKnown RBP13.1□□□□□ -0.31
NEK1-206ENST00000510533 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 TPM3P06753 285 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 ANKRD45Q5TZF3 282 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 AMPHP49418 695 aa13.09□□□□□ -0.31
NEK1-206ENST00000510533 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.31
NEK1-206ENST00000510533 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.31
NEK1-206ENST00000510533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■■■□ 20.3
NEK1-206ENST00000510533 ATP6V1DQ9Y5K8 247 aa13.08□□□□□ -0.32
NEK1-206ENST00000510533 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
NEK1-206ENST00000510533 A0A0U1RQG5 324 aaPredicted RBP13.08□□□□□ -0.32
NEK1-206ENST00000510533 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
NEK1-206ENST00000510533 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
NEK1-206ENST00000510533 RILPL2Q969X0 211 aa13.07□□□□□ -0.32
NEK1-206ENST00000510533 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
NEK1-206ENST00000510533 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
NEK1-206ENST00000510533 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
NEK1-206ENST00000510533 H3BQV1 296 aa13.07□□□□□ -0.32
NEK1-206ENST00000510533 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
NEK1-206ENST00000510533 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
NEK1-206ENST00000510533 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
NEK1-206ENST00000510533 CCDC144AA2RUR9 1427 aa13.06□□□□□ -0.32
NEK1-206ENST00000510533 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
NEK1-206ENST00000510533 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
NEK1-206ENST00000510533 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
NEK1-206ENST00000510533 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
NEK1-206ENST00000510533 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
NEK1-206ENST00000510533 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
NEK1-206ENST00000510533 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
NEK1-206ENST00000510533 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
NEK1-206ENST00000510533 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
NEK1-206ENST00000510533 LTV1Q96GA3 475 aaPredicted RBP13.04□□□□□ -0.32
NEK1-206ENST00000510533 BECN2A8MW95 431 aa13.03□□□□□ -0.32
NEK1-206ENST00000510533 USP47Q96K76 1375 aa13.03□□□□□ -0.32
NEK1-206ENST00000510533 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
NEK1-206ENST00000510533 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
NEK1-206ENST00000510533 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
NEK1-206ENST00000510533 REC8O95072 547 aa13.01□□□□□ -0.33
NEK1-206ENST00000510533 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
NEK1-206ENST00000510533 TPD52L1Q16890 204 aaPredicted RBP13.01□□□□□ -0.33
NEK1-206ENST00000510533 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
NEK1-206ENST00000510533 APAF1O14727 1248 aa13.01□□□□□ -0.33
NEK1-206ENST00000510533 PDE4CQ08493 712 aa13□□□□□ -0.33
NEK1-206ENST00000510533 CEP89Q96ST8 783 aa13□□□□□ -0.33
NEK1-206ENST00000510533 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
NEK1-206ENST00000510533 PES1O00541 588 aaKnown RBP13□□□□□ -0.33
NEK1-206ENST00000510533 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
NEK1-206ENST00000510533 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
NEK1-206ENST00000510533 MARCH6O60337 910 aa12.99□□□□□ -0.33
NEK1-206ENST00000510533 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
NEK1-206ENST00000510533 COG3Q96JB2 828 aa12.99□□□□□ -0.33
NEK1-206ENST00000510533 EVC2Q86UK5 1308 aa12.99□□□□□ -0.33
NEK1-206ENST00000510533 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
NEK1-206ENST00000510533 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
NEK1-206ENST00000510533 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
NEK1-206ENST00000510533 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
NEK1-206ENST00000510533 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
NEK1-206ENST00000510533 TPM1P09493 284 aa12.98□□□□□ -0.33
NEK1-206ENST00000510533 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
NEK1-206ENST00000510533 MCTP1Q6DN14 999 aa12.97□□□□□ -0.33
NEK1-206ENST00000510533 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
NEK1-206ENST00000510533 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
NEK1-206ENST00000510533 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
NEK1-206ENST00000510533 GPS2Q13227 327 aa12.96□□□□□ -0.33
NEK1-206ENST00000510533 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms