RNA–Protein interactions for RNA: ENST00000510168.5

ATP2C1-218, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ATP2C1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-218ENST00000510168 GPS2Q13227 327 aa20.56■□□□□ 0.88
ATP2C1-218ENST00000510168 SOGA1O94964 1423 aa20.56■□□□□ 0.88
ATP2C1-218ENST00000510168 STK26Q9P289 416 aa20.56■□□□□ 0.88
ATP2C1-218ENST00000510168 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
ATP2C1-218ENST00000510168 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
ATP2C1-218ENST00000510168 GORABQ5T7V8 394 aa20.55■□□□□ 0.88
ATP2C1-218ENST00000510168 BECN2A8MW95 431 aa20.55■□□□□ 0.88
ATP2C1-218ENST00000510168 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
ATP2C1-218ENST00000510168 SLC4A10Q6U841 1118 aa20.54■□□□□ 0.88
ATP2C1-218ENST00000510168 CREBRFQ8IUR6 639 aa20.54■□□□□ 0.88
ATP2C1-218ENST00000510168 RASSF8Q8NHQ8 419 aa20.54■□□□□ 0.88
ATP2C1-218ENST00000510168 ZBED9Q6R2W3 1325 aa20.53■□□□□ 0.88
ATP2C1-218ENST00000510168 CCAR2Q8N163 923 aaKnown RBP20.53■□□□□ 0.88
ATP2C1-218ENST00000510168 FAM43AQ8N2R8 423 aa20.52■□□□□ 0.88
ATP2C1-218ENST00000510168 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.87
ATP2C1-218ENST00000510168 CHMP5Q9NZZ3 219 aa20.52■□□□□ 0.87
ATP2C1-218ENST00000510168 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.87
ATP2C1-218ENST00000510168 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.87
ATP2C1-218ENST00000510168 NUP155O75694 1391 aa20.51■□□□□ 0.87
ATP2C1-218ENST00000510168 PLIN1O60240 522 aa20.51■□□□□ 0.87
ATP2C1-218ENST00000510168 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
ATP2C1-218ENST00000510168 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
ATP2C1-218ENST00000510168 KIF15Q9NS87 1388 aa20.49■□□□□ 0.87
ATP2C1-218ENST00000510168 IL27Q8NEV9 243 aa20.49■□□□□ 0.87
ATP2C1-218ENST00000510168 CRBNQ96SW2 442 aa20.49■□□□□ 0.87
ATP2C1-218ENST00000510168 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
ATP2C1-218ENST00000510168 BAZ1BQ9UIG0 1483 aaKnown RBP20.49■□□□□ 0.87
ATP2C1-218ENST00000510168 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
ATP2C1-218ENST00000510168 EIF3AQ14152 1382 aaKnown RBP20.48■□□□□ 0.87
ATP2C1-218ENST00000510168 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
ATP2C1-218ENST00000510168 H3BQV1 296 aa20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 IFFO2Q5TF58 517 aa20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 ZNF592Q92610 1267 aa20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 TSR1Q2NL82 804 aaKnown RBP20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 CEP89Q96ST8 783 aa20.47■□□□□ 0.87
ATP2C1-218ENST00000510168 CHMP4CQ96CF2 233 aa20.46■□□□□ 0.87
ATP2C1-218ENST00000510168 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
ATP2C1-218ENST00000510168 TEX35Q5T0J7 233 aa20.46■□□□□ 0.87
ATP2C1-218ENST00000510168 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
ATP2C1-218ENST00000510168 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
ATP2C1-218ENST00000510168 E9PSI1 815 aa20.45■□□□□ 0.86
ATP2C1-218ENST00000510168 FAM184AQ8NB25 1140 aa20.44■□□□□ 0.86
ATP2C1-218ENST00000510168 PDE4CQ08493 712 aa20.44■□□□□ 0.86
ATP2C1-218ENST00000510168 TPM1P09493 284 aa20.44■□□□□ 0.86
ATP2C1-218ENST00000510168 CCDC70Q6NSX1 233 aa20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 GGT6Q6P531 493 aa20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 COG6Q9Y2V7 657 aa20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 PES1O00541 588 aaKnown RBP20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 RILPL2Q969X0 211 aa20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 TPD52L1Q16890 204 aaPredicted RBP20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
ATP2C1-218ENST00000510168 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
ATP2C1-218ENST00000510168 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
ATP2C1-218ENST00000510168 REC8O95072 547 aa20.41■□□□□ 0.86
ATP2C1-218ENST00000510168 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
ATP2C1-218ENST00000510168 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
ATP2C1-218ENST00000510168 NFKBIBQ15653 356 aa20.41■□□□□ 0.86
ATP2C1-218ENST00000510168 CUX2O14529 1486 aa20.39■□□□□ 0.86
ATP2C1-218ENST00000510168 MAP7D2Q96T17 732 aa20.39■□□□□ 0.85
ATP2C1-218ENST00000510168 TOMM22Q9NS69 142 aa20.39■□□□□ 0.85
ATP2C1-218ENST00000510168 MTERF4Q7Z6M4 381 aaKnown RBP20.38■□□□□ 0.85
ATP2C1-218ENST00000510168 PAK3O75914 559 aaPredicted RBP20.37■□□□□ 0.85
ATP2C1-218ENST00000510168 MRE11P49959 708 aa20.37■□□□□ 0.85
ATP2C1-218ENST00000510168 HOMER1Q86YM7 354 aa20.37■□□□□ 0.85
ATP2C1-218ENST00000510168 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
ATP2C1-218ENST00000510168 NUCB2P80303 420 aa20.36■□□□□ 0.85
ATP2C1-218ENST00000510168 PANK3Q9H999 370 aa20.36■□□□□ 0.85
ATP2C1-218ENST00000510168 IPO7O95373 1038 aaKnown RBP20.35■□□□□ 0.85
ATP2C1-218ENST00000510168 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
ATP2C1-218ENST00000510168 ELL2O00472 640 aaPredicted RBP20.34■□□□□ 0.85
ATP2C1-218ENST00000510168 DDX19BQ9UMR2 479 aa20.34■□□□□ 0.85
ATP2C1-218ENST00000510168 MLECQ14165 292 aa20.34■□□□□ 0.85
ATP2C1-218ENST00000510168 MCTP1Q6DN14 999 aa20.33■□□□□ 0.85
ATP2C1-218ENST00000510168 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.84
ATP2C1-218ENST00000510168 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
ATP2C1-218ENST00000510168 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
ATP2C1-218ENST00000510168 ARGLU1Q9NWB6 273 aaPredicted RBP20.32■□□□□ 0.84
ATP2C1-218ENST00000510168 CPLX2Q6PUV4 134 aaKnown RBP20.31■□□□□ 0.84
ATP2C1-218ENST00000510168 RUFY2Q8WXA3 655 aa20.31■□□□□ 0.84
ATP2C1-218ENST00000510168 TPM2P07951 284 aa20.31■□□□□ 0.84
ATP2C1-218ENST00000510168 R3HCC1Q9Y3T6 440 aaKnown RBP20.31■□□□□ 0.84
ATP2C1-218ENST00000510168 MARCH6O60337 910 aa20.31■□□□□ 0.84
ATP2C1-218ENST00000510168 NGEFQ8N5V2 710 aa20.31■□□□□ 0.84
ATP2C1-218ENST00000510168 BICD2Q8TD16 824 aa20.3■□□□□ 0.84
ATP2C1-218ENST00000510168 APAF1O14727 1248 aa20.3■□□□□ 0.84
ATP2C1-218ENST00000510168 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
ATP2C1-218ENST00000510168 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
ATP2C1-218ENST00000510168 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
ATP2C1-218ENST00000510168 MNS1Q8NEH6 495 aa20.28■□□□□ 0.84
ATP2C1-218ENST00000510168 PATL2C9JE40 543 aaKnown RBP20.27■□□□□ 0.84
ATP2C1-218ENST00000510168 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
ATP2C1-218ENST00000510168 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
ATP2C1-218ENST00000510168 ANKRD20A12PQ8NF67 263 aa20.27■□□□□ 0.84
ATP2C1-218ENST00000510168 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
ATP2C1-218ENST00000510168 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
ATP2C1-218ENST00000510168 SASS6Q6UVJ0 657 aa20.26■□□□□ 0.83
ATP2C1-218ENST00000510168 CCDC39Q9UFE4 941 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms