RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 FBXO31Q5XUX0 539 aaPredicted RBP23.52■■□□□ 1.36
SMAD5-206ENST00000509962 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
SMAD5-206ENST00000509962 A2ML1A8K2U0 1454 aa23.49■■□□□ 1.35
SMAD5-206ENST00000509962 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
SMAD5-206ENST00000509962 TNRQ92752 1358 aa23.48■■□□□ 1.35
SMAD5-206ENST00000509962 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
SMAD5-206ENST00000509962 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
SMAD5-206ENST00000509962 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
SMAD5-206ENST00000509962 ARHGEF5Q12774 1597 aa23.46■■□□□ 1.35
SMAD5-206ENST00000509962 DNMT1P26358 1616 aaKnown RBP23.45■■□□□ 1.34
SMAD5-206ENST00000509962 KDM5DQ9BY66 1539 aa23.45■■□□□ 1.34
SMAD5-206ENST00000509962 THEMISQ8N1K5 641 aaPredicted RBP23.44■■□□□ 1.34
SMAD5-206ENST00000509962 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
SMAD5-206ENST00000509962 PZPP20742 1482 aa23.43■■□□□ 1.34
SMAD5-206ENST00000509962 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
SMAD5-206ENST00000509962 ANKLE2Q86XL3 938 aa23.42■■□□□ 1.34
SMAD5-206ENST00000509962 MIA2Q96PC5 1412 aa23.41■■□□□ 1.34
SMAD5-206ENST00000509962 ILDR2Q71H61 639 aa23.37■■□□□ 1.33
SMAD5-206ENST00000509962 MAP3K1Q13233 1512 aa23.37■■□□□ 1.33
SMAD5-206ENST00000509962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.33
SMAD5-206ENST00000509962 APLP2Q06481 763 aa23.35■■□□□ 1.33
SMAD5-206ENST00000509962 NLRP1Q9C000 1473 aa23.35■■□□□ 1.33
SMAD5-206ENST00000509962 MYOM3Q5VTT5 1437 aa23.34■■□□□ 1.33
SMAD5-206ENST00000509962 MAST1Q9Y2H9 1570 aa23.33■■□□□ 1.33
SMAD5-206ENST00000509962 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.32
SMAD5-206ENST00000509962 UGGT1Q9NYU2 1555 aa23.32■■□□□ 1.32
SMAD5-206ENST00000509962 TOM1O60784 492 aa23.29■■□□□ 1.32
SMAD5-206ENST00000509962 RNF17Q9BXT8 1623 aaKnown RBP23.29■■□□□ 1.32
SMAD5-206ENST00000509962 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
SMAD5-206ENST00000509962 SCAF1Q9H7N4 1312 aaKnown RBP23.29■■□□□ 1.32
SMAD5-206ENST00000509962 SPATA31D1Q6ZQQ2 1576 aa23.28■■□□□ 1.32
SMAD5-206ENST00000509962 NEURL4Q96JN8 1562 aa23.28■■□□□ 1.32
SMAD5-206ENST00000509962 SOCS7O14512 581 aa23.28■■□□□ 1.32
SMAD5-206ENST00000509962 ABCC3O15438 1527 aa23.28■■□□□ 1.32
SMAD5-206ENST00000509962 CPS1P31327 1500 aa23.27■■□□□ 1.32
SMAD5-206ENST00000509962 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
SMAD5-206ENST00000509962 PIP4K2BP78356 416 aa23.26■■□□□ 1.31
SMAD5-206ENST00000509962 ZC3H13Q5T200 1668 aaKnown RBP23.25■■□□□ 1.31
SMAD5-206ENST00000509962 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
SMAD5-206ENST00000509962 RRP7BPQ9NSQ0 103 aa23.25■■□□□ 1.31
SMAD5-206ENST00000509962 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
SMAD5-206ENST00000509962 MED14O60244 1454 aa23.24■■□□□ 1.31
SMAD5-206ENST00000509962 CFAP65Q6ZU64 1925 aaKnown RBP23.23■■□□□ 1.31
SMAD5-206ENST00000509962 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
SMAD5-206ENST00000509962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMAD5-206ENST00000509962 KIF15Q9NS87 1388 aa23.21■■□□□ 1.31
SMAD5-206ENST00000509962 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
SMAD5-206ENST00000509962 ABCC5O15440 1437 aa23.19■■□□□ 1.3
SMAD5-206ENST00000509962 MROH1Q8NDA8 1641 aa23.19■■□□□ 1.3
SMAD5-206ENST00000509962 VWDEQ8N2E2 1590 aa23.18■■□□□ 1.3
SMAD5-206ENST00000509962 HSPA1LP34931 641 aa23.18■■□□□ 1.3
SMAD5-206ENST00000509962 CEP152O94986 1710 aa23.18■■□□□ 1.3
SMAD5-206ENST00000509962 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
SMAD5-206ENST00000509962 PTPN23Q9H3S7 1636 aa23.16■■□□□ 1.3
SMAD5-206ENST00000509962 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
SMAD5-206ENST00000509962 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
SMAD5-206ENST00000509962 ERBINQ96RT1 1412 aa23.15■■□□□ 1.3
SMAD5-206ENST00000509962 KANK1Q14678 1352 aa23.14■■□□□ 1.3
SMAD5-206ENST00000509962 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
SMAD5-206ENST00000509962 DAPK1P53355 1430 aa23.13■■□□□ 1.29
SMAD5-206ENST00000509962 ARHGAP31Q2M1Z3 1444 aa23.13■■□□□ 1.29
SMAD5-206ENST00000509962 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
SMAD5-206ENST00000509962 UBR1Q8IWV7 1749 aa23.11■■□□□ 1.29
SMAD5-206ENST00000509962 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
SMAD5-206ENST00000509962 LTKP29376 864 aa23.11■■□□□ 1.29
SMAD5-206ENST00000509962 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
SMAD5-206ENST00000509962 ANKRD30AQ9BXX3 1397 aa23.11■■□□□ 1.29
SMAD5-206ENST00000509962 PRDM15P57071 1507 aaPredicted RBP23.09■■□□□ 1.29
SMAD5-206ENST00000509962 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
SMAD5-206ENST00000509962 LRRC7Q96NW7 1537 aa23.07■■□□□ 1.28
SMAD5-206ENST00000509962 STRCP1A6NGW2 1772 aa23.05■■□□□ 1.28
SMAD5-206ENST00000509962 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
SMAD5-206ENST00000509962 SLIT1O75093 1534 aa23.04■■□□□ 1.28
SMAD5-206ENST00000509962 IDI1Q13907 227 aa23.03■■□□□ 1.28
SMAD5-206ENST00000509962 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.28
SMAD5-206ENST00000509962 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
SMAD5-206ENST00000509962 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
SMAD5-206ENST00000509962 PIK3C2BO00750 1634 aa23■■□□□ 1.27
SMAD5-206ENST00000509962 SYNMO15061 1565 aa22.99■■□□□ 1.27
SMAD5-206ENST00000509962 ALKQ9UM73 1620 aa22.99■■□□□ 1.27
SMAD5-206ENST00000509962 LMTK2Q8IWU2 1503 aa22.98■■□□□ 1.27
SMAD5-206ENST00000509962 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
SMAD5-206ENST00000509962 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
SMAD5-206ENST00000509962 SLC52A1Q9NWF4 448 aa22.96■■□□□ 1.27
SMAD5-206ENST00000509962 EFCAB6Q5THR3 1501 aa22.95■■□□□ 1.26
SMAD5-206ENST00000509962 BCANQ96GW7 911 aa22.94■■□□□ 1.26
SMAD5-206ENST00000509962 SLC26A8Q96RN1 970 aa22.93■■□□□ 1.26
SMAD5-206ENST00000509962 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
SMAD5-206ENST00000509962 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
SMAD5-206ENST00000509962 KCNA6P17658 529 aa22.92■■□□□ 1.26
SMAD5-206ENST00000509962 NOS1P29475 1434 aa22.91■■□□□ 1.26
SMAD5-206ENST00000509962 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
SMAD5-206ENST00000509962 PROSER2Q86WR7 435 aaPredicted RBP22.9■■□□□ 1.26
SMAD5-206ENST00000509962 HDGFP51858 240 aaKnown RBP22.89■■□□□ 1.25
SMAD5-206ENST00000509962 XIRP1Q702N8 1843 aaKnown RBP22.87■■□□□ 1.25
SMAD5-206ENST00000509962 TMEM94Q12767 1356 aa22.86■■□□□ 1.25
SMAD5-206ENST00000509962 TET3O43151 1660 aa22.85■■□□□ 1.25
SMAD5-206ENST00000509962 RPRD2Q5VT52 1461 aaKnown RBP22.85■■□□□ 1.25
SMAD5-206ENST00000509962 ADGRB3O60242 1522 aa22.83■■□□□ 1.25
SMAD5-206ENST00000509962 RBM33Q96EV2 1170 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 241.1 ms