RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
CYSTM1-204ENST00000509789 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
CYSTM1-204ENST00000509789 ABCA6Q8N139 1617 aa20.6■□□□□ 0.89
CYSTM1-204ENST00000509789 GCC2Q8IWJ2 1684 aa20.59■□□□□ 0.89
CYSTM1-204ENST00000509789 ARHGEF40Q8TER5 1519 aa20.58■□□□□ 0.88
CYSTM1-204ENST00000509789 KIF3BO15066 747 aa20.57■□□□□ 0.88
CYSTM1-204ENST00000509789 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
CYSTM1-204ENST00000509789 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.87
CYSTM1-204ENST00000509789 REREQ9P2R6 1566 aa20.51■□□□□ 0.87
CYSTM1-204ENST00000509789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.87
CYSTM1-204ENST00000509789 GGT6Q6P531 493 aa20.49■□□□□ 0.87
CYSTM1-204ENST00000509789 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
CYSTM1-204ENST00000509789 EIF2AK4Q9P2K8 1649 aaKnown RBP20.49■□□□□ 0.87
CYSTM1-204ENST00000509789 AGLP35573 1532 aa20.48■□□□□ 0.87
CYSTM1-204ENST00000509789 NUP155O75694 1391 aa20.47■□□□□ 0.87
CYSTM1-204ENST00000509789 KANK1Q14678 1352 aa20.46■□□□□ 0.87
CYSTM1-204ENST00000509789 MLECQ14165 292 aa20.43■□□□□ 0.86
CYSTM1-204ENST00000509789 BCORL1Q5H9F3 1711 aa20.43■□□□□ 0.86
CYSTM1-204ENST00000509789 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
CYSTM1-204ENST00000509789 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
CYSTM1-204ENST00000509789 UNC13BO14795 1591 aa20.41■□□□□ 0.86
CYSTM1-204ENST00000509789 RNF17Q9BXT8 1623 aaKnown RBP20.41■□□□□ 0.86
CYSTM1-204ENST00000509789 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
CYSTM1-204ENST00000509789 ESF1Q9H501 851 aaKnown RBP20.39■□□□□ 0.85
CYSTM1-204ENST00000509789 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
CYSTM1-204ENST00000509789 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
CYSTM1-204ENST00000509789 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
CYSTM1-204ENST00000509789 KDM5DQ9BY66 1539 aa20.37■□□□□ 0.85
CYSTM1-204ENST00000509789 PZPP20742 1482 aa20.36■□□□□ 0.85
CYSTM1-204ENST00000509789 MROH1Q8NDA8 1641 aa20.35■□□□□ 0.85
CYSTM1-204ENST00000509789 PKD2Q13563 968 aa20.35■□□□□ 0.85
CYSTM1-204ENST00000509789 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
CYSTM1-204ENST00000509789 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
CYSTM1-204ENST00000509789 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
CYSTM1-204ENST00000509789 IQGAP3Q86VI3 1631 aa20.34■□□□□ 0.85
CYSTM1-204ENST00000509789 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
CYSTM1-204ENST00000509789 ABCC3O15438 1527 aa20.3■□□□□ 0.84
CYSTM1-204ENST00000509789 LMTK2Q8IWU2 1503 aa20.3■□□□□ 0.84
CYSTM1-204ENST00000509789 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.84
CYSTM1-204ENST00000509789 TET3O43151 1660 aa20.26■□□□□ 0.83
CYSTM1-204ENST00000509789 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
CYSTM1-204ENST00000509789 CEP152O94986 1710 aa20.25■□□□□ 0.83
CYSTM1-204ENST00000509789 ZMYM3Q14202 1370 aa20.23■□□□□ 0.83
CYSTM1-204ENST00000509789 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
CYSTM1-204ENST00000509789 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
CYSTM1-204ENST00000509789 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
CYSTM1-204ENST00000509789 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
CYSTM1-204ENST00000509789 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
CYSTM1-204ENST00000509789 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
CYSTM1-204ENST00000509789 NPATQ14207 1427 aa20.2■□□□□ 0.82
CYSTM1-204ENST00000509789 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
CYSTM1-204ENST00000509789 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
CYSTM1-204ENST00000509789 E9PCH4 1651 aa20.18■□□□□ 0.82
CYSTM1-204ENST00000509789 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
CYSTM1-204ENST00000509789 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
CYSTM1-204ENST00000509789 PTPRTO14522 1441 aa20.16■□□□□ 0.82
CYSTM1-204ENST00000509789 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
CYSTM1-204ENST00000509789 MADDQ8WXG6 1647 aa20.15■□□□□ 0.82
CYSTM1-204ENST00000509789 MROH2AA6NES4 1674 aa20.15■□□□□ 0.82
CYSTM1-204ENST00000509789 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
CYSTM1-204ENST00000509789 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
CYSTM1-204ENST00000509789 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
CYSTM1-204ENST00000509789 NOS1P29475 1434 aa20.12■□□□□ 0.81
CYSTM1-204ENST00000509789 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
CYSTM1-204ENST00000509789 RIMS1Q86UR5 1692 aaKnown RBP20.12■□□□□ 0.81
CYSTM1-204ENST00000509789 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
CYSTM1-204ENST00000509789 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
CYSTM1-204ENST00000509789 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
CYSTM1-204ENST00000509789 KDM4FA0A1W2PPD8 638 aa20.09■□□□□ 0.81
CYSTM1-204ENST00000509789 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
CYSTM1-204ENST00000509789 TRPM2O94759 1503 aa20.08■□□□□ 0.81
CYSTM1-204ENST00000509789 SPHKAPQ2M3C7 1700 aa20.08■□□□□ 0.81
CYSTM1-204ENST00000509789 TNRQ92752 1358 aa20.08■□□□□ 0.8
CYSTM1-204ENST00000509789 C3P01024 1663 aa20.07■□□□□ 0.8
CYSTM1-204ENST00000509789 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
CYSTM1-204ENST00000509789 PTPRMP28827 1452 aa20.06■□□□□ 0.8
CYSTM1-204ENST00000509789 SPATA31D1Q6ZQQ2 1576 aa20.06■□□□□ 0.8
CYSTM1-204ENST00000509789 IDI1Q13907 227 aa20.05■□□□□ 0.8
CYSTM1-204ENST00000509789 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
CYSTM1-204ENST00000509789 SYNMO15061 1565 aa20.03■□□□□ 0.8
CYSTM1-204ENST00000509789 CACNB1Q02641 598 aaPredicted RBP20.02■□□□□ 0.8
CYSTM1-204ENST00000509789 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
CYSTM1-204ENST00000509789 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
CYSTM1-204ENST00000509789 CLTCL1P53675 1640 aa20■□□□□ 0.79
CYSTM1-204ENST00000509789 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
CYSTM1-204ENST00000509789 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
CYSTM1-204ENST00000509789 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
CYSTM1-204ENST00000509789 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
CYSTM1-204ENST00000509789 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
CYSTM1-204ENST00000509789 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
CYSTM1-204ENST00000509789 PIK3C2BO00750 1634 aa19.97■□□□□ 0.79
CYSTM1-204ENST00000509789 ZNF326Q5BKZ1 582 aaKnown RBP19.96■□□□□ 0.79
CYSTM1-204ENST00000509789 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
CYSTM1-204ENST00000509789 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
CYSTM1-204ENST00000509789 KIF1BO60333 1816 aa19.93■□□□□ 0.78
CYSTM1-204ENST00000509789 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
CYSTM1-204ENST00000509789 RPGRIP1LQ68CZ1 1315 aa19.92■□□□□ 0.78
CYSTM1-204ENST00000509789 THEMISQ8N1K5 641 aaPredicted RBP19.91■□□□□ 0.78
CYSTM1-204ENST00000509789 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
CYSTM1-204ENST00000509789 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms