RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
CYSTM1-203ENST00000509589 TNRQ92752 1358 aa16.6■□□□□ 0.25
CYSTM1-203ENST00000509589 KIF3BO15066 747 aa16.59■□□□□ 0.25
CYSTM1-203ENST00000509589 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
CYSTM1-203ENST00000509589 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
CYSTM1-203ENST00000509589 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
CYSTM1-203ENST00000509589 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
CYSTM1-203ENST00000509589 PZPP20742 1482 aa16.58■□□□□ 0.24
CYSTM1-203ENST00000509589 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
CYSTM1-203ENST00000509589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.248e-6■■□□□ 11.9
CYSTM1-203ENST00000509589 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
CYSTM1-203ENST00000509589 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
CYSTM1-203ENST00000509589 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
CYSTM1-203ENST00000509589 HSPA1LP34931 641 aa16.54■□□□□ 0.24
CYSTM1-203ENST00000509589 PIP4K2BP78356 416 aa16.54■□□□□ 0.24
CYSTM1-203ENST00000509589 CFAP65Q6ZU64 1925 aaKnown RBP16.53■□□□□ 0.24
CYSTM1-203ENST00000509589 VWDEQ8N2E2 1590 aa16.53■□□□□ 0.24
CYSTM1-203ENST00000509589 CPS1P31327 1500 aa16.53■□□□□ 0.24
CYSTM1-203ENST00000509589 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
CYSTM1-203ENST00000509589 MIA2Q96PC5 1412 aa16.52■□□□□ 0.23
CYSTM1-203ENST00000509589 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
CYSTM1-203ENST00000509589 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
CYSTM1-203ENST00000509589 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
CYSTM1-203ENST00000509589 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
CYSTM1-203ENST00000509589 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
CYSTM1-203ENST00000509589 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
CYSTM1-203ENST00000509589 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
CYSTM1-203ENST00000509589 TOM1O60784 492 aa16.48■□□□□ 0.23
CYSTM1-203ENST00000509589 MED14O60244 1454 aa16.48■□□□□ 0.23
CYSTM1-203ENST00000509589 RSPH4AQ5TD94 716 aa16.47■□□□□ 0.23
CYSTM1-203ENST00000509589 THEMISQ8N1K5 641 aaPredicted RBP16.47■□□□□ 0.23
CYSTM1-203ENST00000509589 DEPDC5O75140 1603 aa16.47■□□□□ 0.23
CYSTM1-203ENST00000509589 ABCC3O15438 1527 aa16.46■□□□□ 0.23
CYSTM1-203ENST00000509589 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.23
CYSTM1-203ENST00000509589 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
CYSTM1-203ENST00000509589 CEP152O94986 1710 aa16.45■□□□□ 0.22
CYSTM1-203ENST00000509589 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
CYSTM1-203ENST00000509589 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
CYSTM1-203ENST00000509589 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
CYSTM1-203ENST00000509589 MROH1Q8NDA8 1641 aa16.44■□□□□ 0.22
CYSTM1-203ENST00000509589 LRRC9Q6ZRR7 1453 aa16.43■□□□□ 0.22
CYSTM1-203ENST00000509589 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
CYSTM1-203ENST00000509589 ERVK-7P63135 1459 aa16.42■□□□□ 0.22
CYSTM1-203ENST00000509589 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
CYSTM1-203ENST00000509589 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
CYSTM1-203ENST00000509589 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
CYSTM1-203ENST00000509589 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
CYSTM1-203ENST00000509589 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
CYSTM1-203ENST00000509589 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
CYSTM1-203ENST00000509589 UBR1Q8IWV7 1749 aa16.37■□□□□ 0.21
CYSTM1-203ENST00000509589 SYNMO15061 1565 aa16.37■□□□□ 0.21
CYSTM1-203ENST00000509589 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
CYSTM1-203ENST00000509589 MYOM3Q5VTT5 1437 aa16.35■□□□□ 0.21
CYSTM1-203ENST00000509589 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
CYSTM1-203ENST00000509589 LTKP29376 864 aa16.34■□□□□ 0.21
CYSTM1-203ENST00000509589 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
CYSTM1-203ENST00000509589 DUOX2Q9NRD8 1548 aa16.34■□□□□ 0.21
CYSTM1-203ENST00000509589 PRDM15P57071 1507 aaPredicted RBP16.32■□□□□ 0.2
CYSTM1-203ENST00000509589 ARHGAP23Q9P227 1491 aa16.32■□□□□ 0.2
CYSTM1-203ENST00000509589 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
CYSTM1-203ENST00000509589 SLIT1O75093 1534 aa16.31■□□□□ 0.2
CYSTM1-203ENST00000509589 KIF15Q9NS87 1388 aa16.3■□□□□ 0.2
CYSTM1-203ENST00000509589 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
CYSTM1-203ENST00000509589 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
CYSTM1-203ENST00000509589 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-203ENST00000509589 ABCC5O15440 1437 aa16.28■□□□□ 0.2
CYSTM1-203ENST00000509589 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
CYSTM1-203ENST00000509589 PIK3C2BO00750 1634 aa16.28■□□□□ 0.2
CYSTM1-203ENST00000509589 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
CYSTM1-203ENST00000509589 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
CYSTM1-203ENST00000509589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
CYSTM1-203ENST00000509589 RGS17Q9UGC6 210 aaPredicted RBP16.25■□□□□ 0.19
CYSTM1-203ENST00000509589 PTPN23Q9H3S7 1636 aa16.25■□□□□ 0.19
CYSTM1-203ENST00000509589 TMEM2Q9UHN6 1383 aa16.25■□□□□ 0.19
CYSTM1-203ENST00000509589 DAPK1P53355 1430 aa16.23■□□□□ 0.19
CYSTM1-203ENST00000509589 EID1Q9Y6B2 187 aa16.23■□□□□ 0.19
CYSTM1-203ENST00000509589 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
CYSTM1-203ENST00000509589 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
CYSTM1-203ENST00000509589 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
CYSTM1-203ENST00000509589 IDI1Q13907 227 aa16.2■□□□□ 0.18
CYSTM1-203ENST00000509589 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
CYSTM1-203ENST00000509589 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
CYSTM1-203ENST00000509589 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
CYSTM1-203ENST00000509589 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
CYSTM1-203ENST00000509589 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
CYSTM1-203ENST00000509589 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
CYSTM1-203ENST00000509589 TET3O43151 1660 aa16.18■□□□□ 0.18
CYSTM1-203ENST00000509589 KANK1Q14678 1352 aa16.18■□□□□ 0.18
CYSTM1-203ENST00000509589 MYO5BQ9ULV0 1848 aa16.18■□□□□ 0.18
CYSTM1-203ENST00000509589 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
CYSTM1-203ENST00000509589 ROBO1Q9Y6N7 1651 aa16.16■□□□□ 0.18
CYSTM1-203ENST00000509589 KCNA6P17658 529 aa16.16■□□□□ 0.18
CYSTM1-203ENST00000509589 ADGRB3O60242 1522 aa16.15■□□□□ 0.18
CYSTM1-203ENST00000509589 NOS1P29475 1434 aa16.15■□□□□ 0.18
CYSTM1-203ENST00000509589 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
CYSTM1-203ENST00000509589 PROSER2Q86WR7 435 aaPredicted RBP16.14■□□□□ 0.17
CYSTM1-203ENST00000509589 APLP2Q06481 763 aa16.13■□□□□ 0.17
CYSTM1-203ENST00000509589 POTEAQ6S8J7 498 aa16.13■□□□□ 0.17
CYSTM1-203ENST00000509589 NWD1Q149M9 1564 aa16.13■□□□□ 0.17
CYSTM1-203ENST00000509589 NKTRP30414 1462 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms