RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 FAM135AQ9P2D6 1515 aa34.5■■■■□ 3.11
PACRGL-220ENST00000508952 NCOA1Q15788 1441 aa34.5■■■■□ 3.11
PACRGL-220ENST00000508952 FGD6Q6ZV73 1430 aa34.5■■■■□ 3.11
PACRGL-220ENST00000508952 CAMSAP1Q5T5Y3 1602 aa34.5■■■■□ 3.11
PACRGL-220ENST00000508952 RNF17Q9BXT8 1623 aaKnown RBP34.49■■■■□ 3.11
PACRGL-220ENST00000508952 CEP170BQ9Y4F5 1589 aaPredicted RBP34.49■■■■□ 3.11
PACRGL-220ENST00000508952 WASHC2CQ9Y4E1 1318 aa34.48■■■■□ 3.11
PACRGL-220ENST00000508952 ABCC5O15440 1437 aa34.47■■■■□ 3.11
PACRGL-220ENST00000508952 EIF2AK4Q9P2K8 1649 aaKnown RBP34.46■■■■□ 3.11
PACRGL-220ENST00000508952 TCOF1Q13428 1488 aaKnown RBP34.45■■■■□ 3.1
PACRGL-220ENST00000508952 PTPRTO14522 1441 aa34.44■■■■□ 3.1
PACRGL-220ENST00000508952 PZPP20742 1482 aa34.44■■■■□ 3.1
PACRGL-220ENST00000508952 SHANK2Q9UPX8 1470 aa34.44■■■■□ 3.1
PACRGL-220ENST00000508952 DNMT1P26358 1616 aaKnown RBP34.44■■■■□ 3.1
PACRGL-220ENST00000508952 FBXO31Q5XUX0 539 aaPredicted RBP34.43■■■■□ 3.1
PACRGL-220ENST00000508952 DUOX2Q9NRD8 1548 aa34.41■■■■□ 3.1
PACRGL-220ENST00000508952 DAPK1P53355 1430 aa34.41■■■■□ 3.1
PACRGL-220ENST00000508952 CERKQ8TCT0 537 aa34.41■■■■□ 3.1
PACRGL-220ENST00000508952 MROH1Q8NDA8 1641 aa34.39■■■■□ 3.1
PACRGL-220ENST00000508952 KIF15Q9NS87 1388 aa34.38■■■■□ 3.09
PACRGL-220ENST00000508952 TNRQ92752 1358 aa34.37■■■■□ 3.09
PACRGL-220ENST00000508952 ABCC3O15438 1527 aa34.37■■■■□ 3.09
PACRGL-220ENST00000508952 A2ML1A8K2U0 1454 aa34.37■■■■□ 3.09
PACRGL-220ENST00000508952 ZC3H13Q5T200 1668 aaKnown RBP34.37■■■■□ 3.09
PACRGL-220ENST00000508952 NCKAP5LQ9HCH0 1330 aa34.35■■■■□ 3.09
PACRGL-220ENST00000508952 RRP7BPQ9NSQ0 103 aa34.34■■■■□ 3.09
PACRGL-220ENST00000508952 PLA2R1Q13018 1463 aa34.33■■■■□ 3.09
PACRGL-220ENST00000508952 CEP152O94986 1710 aa34.33■■■■□ 3.09
PACRGL-220ENST00000508952 CHIC2Q9UKJ5 165 aa34.29■■■■□ 3.08
PACRGL-220ENST00000508952 ERBINQ96RT1 1412 aa34.29■■■■□ 3.08
PACRGL-220ENST00000508952 PRDM15P57071 1507 aaPredicted RBP34.25■■■■□ 3.07
PACRGL-220ENST00000508952 PKD2Q13563 968 aa34.24■■■■□ 3.07
PACRGL-220ENST00000508952 FAM50AQ14320 339 aaKnown RBP34.24■■■■□ 3.07
PACRGL-220ENST00000508952 ANKRD30AQ9BXX3 1397 aa34.23■■■■□ 3.07
PACRGL-220ENST00000508952 LTBP4Q8N2S1 1624 aa34.23■■■■□ 3.07
PACRGL-220ENST00000508952 NLRP1Q9C000 1473 aa34.21■■■■□ 3.07
PACRGL-220ENST00000508952 SPATA31D1Q6ZQQ2 1576 aa34.21■■■■□ 3.07
PACRGL-220ENST00000508952 DEPDC5O75140 1603 aa34.21■■■■□ 3.07
PACRGL-220ENST00000508952 CFAP65Q6ZU64 1925 aaKnown RBP34.2■■■■□ 3.07
PACRGL-220ENST00000508952 ERVK-7P63135 1459 aa34.19■■■■□ 3.06
PACRGL-220ENST00000508952 POLR1AO95602 1720 aaPredicted RBP34.18■■■■□ 3.06
PACRGL-220ENST00000508952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.17■■■■□ 3.06
PACRGL-220ENST00000508952 UGGT1Q9NYU2 1555 aa34.16■■■■□ 3.06
PACRGL-220ENST00000508952 ADGRL2O95490 1459 aa34.15■■■■□ 3.06
PACRGL-220ENST00000508952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.13■■■■□ 3.05
PACRGL-220ENST00000508952 NEURL4Q96JN8 1562 aa34.13■■■■□ 3.05
PACRGL-220ENST00000508952 ZNF335Q9H4Z2 1342 aaPredicted RBP34.12■■■■□ 3.05
PACRGL-220ENST00000508952 THEMISQ8N1K5 641 aaPredicted RBP34.1■■■■□ 3.05
PACRGL-220ENST00000508952 KANK1Q14678 1352 aa34.09■■■■□ 3.05
PACRGL-220ENST00000508952 ARHGAP31Q2M1Z3 1444 aa34.08■■■■□ 3.05
PACRGL-220ENST00000508952 PPARGC1BQ86YN6 1023 aaKnown RBP34.08■■■■□ 3.05
PACRGL-220ENST00000508952 VWDEQ8N2E2 1590 aa34.05■■■■□ 3.04
PACRGL-220ENST00000508952 ANKLE2Q86XL3 938 aa34.03■■■■□ 3.04
PACRGL-220ENST00000508952 UBR1Q8IWV7 1749 aa34.01■■■■□ 3.04
PACRGL-220ENST00000508952 LMTK2Q8IWU2 1503 aa34.01■■■■□ 3.04
PACRGL-220ENST00000508952 IQSEC2Q5JU85 1478 aa34.01■■■■□ 3.03
PACRGL-220ENST00000508952 ANKRD50Q9ULJ7 1429 aa33.99■■■■□ 3.03
PACRGL-220ENST00000508952 NPHP4O75161 1426 aaPredicted RBP33.96■■■■□ 3.03
PACRGL-220ENST00000508952 MED14O60244 1454 aa33.95■■■■□ 3.02
PACRGL-220ENST00000508952 EFCAB6Q5THR3 1501 aa33.94■■■■□ 3.02
PACRGL-220ENST00000508952 IQGAP1P46940 1657 aa33.93■■■■□ 3.02
PACRGL-220ENST00000508952 PIK3C2BO00750 1634 aa33.93■■■■□ 3.02
PACRGL-220ENST00000508952 SYNMO15061 1565 aa33.89■■■■□ 3.02
PACRGL-220ENST00000508952 ITGAEP38570 1179 aa33.88■■■■□ 3.01
PACRGL-220ENST00000508952 ROCK1Q13464 1354 aa33.86■■■■□ 3.01
PACRGL-220ENST00000508952 UNC13BO14795 1591 aa33.85■■■■□ 3.01
PACRGL-220ENST00000508952 SLIT1O75093 1534 aa33.84■■■■□ 3.01
PACRGL-220ENST00000508952 SCAF11Q99590 1463 aaKnown RBP33.83■■■■□ 3.01
PACRGL-220ENST00000508952 ARHGAP23Q9P227 1491 aa33.83■■■■□ 3.01
PACRGL-220ENST00000508952 NOS1P29475 1434 aa33.83■■■■□ 3.01
PACRGL-220ENST00000508952 TET3O43151 1660 aa33.83■■■■□ 3.01
PACRGL-220ENST00000508952 CPS1P31327 1500 aa33.83■■■■□ 3.01
PACRGL-220ENST00000508952 LTKP29376 864 aa33.8■■■■□ 3
PACRGL-220ENST00000508952 IDI1Q13907 227 aa33.8■■■■□ 3
PACRGL-220ENST00000508952 STAG3Q9UJ98 1225 aa33.79■■■■□ 3
PACRGL-220ENST00000508952 KDM5AP29375 1690 aaKnown RBP33.79■■■■□ 3
PACRGL-220ENST00000508952 GCC2Q8IWJ2 1684 aa33.78■■■■□ 3
PACRGL-220ENST00000508952 UBAP1LF5GYI3 381 aa33.78■■■■□ 3
PACRGL-220ENST00000508952 TXNDC2Q86VQ3 553 aa33.78■■■■□ 3
PACRGL-220ENST00000508952 RPRD2Q5VT52 1461 aaKnown RBP33.77■■■■□ 3
PACRGL-220ENST00000508952 STRCP1A6NGW2 1772 aa33.76■■■■□ 3
PACRGL-220ENST00000508952 TMEM2Q9UHN6 1383 aa33.74■■■□□ 2.99
PACRGL-220ENST00000508952 ADGRB3O60242 1522 aa33.73■■■□□ 2.99
PACRGL-220ENST00000508952 EID1Q9Y6B2 187 aa33.72■■■□□ 2.99
PACRGL-220ENST00000508952 IQGAP3Q86VI3 1631 aa33.71■■■□□ 2.99
PACRGL-220ENST00000508952 RRBP1Q9P2E9 1410 aaKnown RBP33.7■■■□□ 2.99
PACRGL-220ENST00000508952 E9PCH4 1651 aa33.7■■■□□ 2.99
PACRGL-220ENST00000508952 SLC52A1Q9NWF4 448 aa33.68■■■□□ 2.98
PACRGL-220ENST00000508952 MYO5BQ9ULV0 1848 aa33.65■■■□□ 2.98
PACRGL-220ENST00000508952 NUP155O75694 1391 aa33.64■■■□□ 2.98
PACRGL-220ENST00000508952 LRRC7Q96NW7 1537 aa33.62■■■□□ 2.97
PACRGL-220ENST00000508952 TMEM131LA2VDJ0 1609 aa33.57■■■□□ 2.97
PACRGL-220ENST00000508952 SCAF1Q9H7N4 1312 aaKnown RBP33.56■■■□□ 2.96
PACRGL-220ENST00000508952 TOM1O60784 492 aa33.56■■■□□ 2.96
PACRGL-220ENST00000508952 PIP4K2BP78356 416 aa33.56■■■□□ 2.96
PACRGL-220ENST00000508952 ALKQ9UM73 1620 aa33.53■■■□□ 2.96
PACRGL-220ENST00000508952 ZFYVE9O95405 1425 aa33.52■■■□□ 2.96
PACRGL-220ENST00000508952 SLC26A8Q96RN1 970 aa33.51■■■□□ 2.95
PACRGL-220ENST00000508952 CHGAP10645 457 aaKnown RBP33.5■■■□□ 2.95
PACRGL-220ENST00000508952 SENP3Q9H4L4 574 aaPredicted RBP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms