RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 RRP7BPQ9NSQ0 103 aa37.58■■■■□ 3.61
PROM1-209ENST00000508940 CHIC2Q9UKJ5 165 aa37.55■■■■□ 3.6
PROM1-209ENST00000508940 DUOX2Q9NRD8 1548 aa37.55■■■■□ 3.6
PROM1-209ENST00000508940 KIF15Q9NS87 1388 aa37.55■■■■□ 3.6
PROM1-209ENST00000508940 PPARGC1BQ86YN6 1023 aaKnown RBP37.54■■■■□ 3.6
PROM1-209ENST00000508940 FAM135AQ9P2D6 1515 aa37.52■■■■□ 3.6
PROM1-209ENST00000508940 KDM5DQ9BY66 1539 aa37.51■■■■□ 3.6
PROM1-209ENST00000508940 ANKRD30AQ9BXX3 1397 aa37.5■■■■□ 3.59
PROM1-209ENST00000508940 PTPRKQ15262 1439 aa37.5■■■■□ 3.59
PROM1-209ENST00000508940 EIF2AK4Q9P2K8 1649 aaKnown RBP37.5■■■■□ 3.59
PROM1-209ENST00000508940 RNF17Q9BXT8 1623 aaKnown RBP37.45■■■■□ 3.59
PROM1-209ENST00000508940 ERBINQ96RT1 1412 aa37.43■■■■□ 3.58
PROM1-209ENST00000508940 NCOA1Q15788 1441 aa37.39■■■■□ 3.58
PROM1-209ENST00000508940 FBXO31Q5XUX0 539 aaPredicted RBP37.39■■■■□ 3.58
PROM1-209ENST00000508940 DMRT2Q9Y5R5 561 aa37.39■■■■□ 3.58
PROM1-209ENST00000508940 PZPP20742 1482 aa37.38■■■■□ 3.57
PROM1-209ENST00000508940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.35■■■■□ 3.57
PROM1-209ENST00000508940 MYO3AQ8NEV4 1616 aa37.33■■■■□ 3.57
PROM1-209ENST00000508940 TNRQ92752 1358 aa37.33■■■■□ 3.57
PROM1-209ENST00000508940 ABCC3O15438 1527 aa37.33■■■■□ 3.57
PROM1-209ENST00000508940 ZC3H13Q5T200 1668 aaKnown RBP37.33■■■■□ 3.57
PROM1-209ENST00000508940 ADGRL2O95490 1459 aa37.33■■■■□ 3.57
PROM1-209ENST00000508940 MROH1Q8NDA8 1641 aa37.31■■■■□ 3.56
PROM1-209ENST00000508940 STRCQ7RTU9 1775 aa37.29■■■■□ 3.56
PROM1-209ENST00000508940 KANK1Q14678 1352 aa37.29■■■■□ 3.56
PROM1-209ENST00000508940 CEP170BQ9Y4F5 1589 aaPredicted RBP37.28■■■■□ 3.56
PROM1-209ENST00000508940 ZNF142P52746 1687 aaPredicted RBP37.26■■■■□ 3.56
PROM1-209ENST00000508940 CAMSAP1Q5T5Y3 1602 aa37.25■■■■□ 3.55
PROM1-209ENST00000508940 ITGAEP38570 1179 aa37.25■■■■□ 3.55
PROM1-209ENST00000508940 CEP152O94986 1710 aa37.24■■■■□ 3.55
PROM1-209ENST00000508940 A2ML1A8K2U0 1454 aa37.24■■■■□ 3.55
PROM1-209ENST00000508940 PRDM15P57071 1507 aaPredicted RBP37.24■■■■□ 3.55
PROM1-209ENST00000508940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.22■■■■□ 3.55
PROM1-209ENST00000508940 ANKRD50Q9ULJ7 1429 aa37.19■■■■□ 3.54
PROM1-209ENST00000508940 DEPDC5O75140 1603 aa37.19■■■■□ 3.54
PROM1-209ENST00000508940 PTPRTO14522 1441 aa37.18■■■■□ 3.54
PROM1-209ENST00000508940 NCKAP5LQ9HCH0 1330 aa37.16■■■■□ 3.54
PROM1-209ENST00000508940 NLRP1Q9C000 1473 aa37.15■■■■□ 3.54
PROM1-209ENST00000508940 PKD2Q13563 968 aa37.15■■■■□ 3.54
PROM1-209ENST00000508940 ILDR1Q86SU0 546 aaPredicted RBP37.15■■■■□ 3.54
PROM1-209ENST00000508940 ROCK1Q13464 1354 aa37.15■■■■□ 3.54
PROM1-209ENST00000508940 PLA2R1Q13018 1463 aa37.14■■■■□ 3.54
PROM1-209ENST00000508940 CFAP65Q6ZU64 1925 aaKnown RBP37.14■■■■□ 3.54
PROM1-209ENST00000508940 ERVK-7P63135 1459 aa37.13■■■■□ 3.54
PROM1-209ENST00000508940 SPATA31D1Q6ZQQ2 1576 aa37.12■■■■□ 3.53
PROM1-209ENST00000508940 ARHGAP31Q2M1Z3 1444 aa37.12■■■■□ 3.53
PROM1-209ENST00000508940 THEMISQ8N1K5 641 aaPredicted RBP37.11■■■■□ 3.53
PROM1-209ENST00000508940 RRBP1Q9P2E9 1410 aaKnown RBP37.07■■■■□ 3.52
PROM1-209ENST00000508940 UGGT1Q9NYU2 1555 aa37.05■■■■□ 3.52
PROM1-209ENST00000508940 LMTK2Q8IWU2 1503 aa37.05■■■■□ 3.52
PROM1-209ENST00000508940 VWDEQ8N2E2 1590 aa37.04■■■■□ 3.52
PROM1-209ENST00000508940 CERKQ8TCT0 537 aa37.03■■■■□ 3.52
PROM1-209ENST00000508940 FBXO41Q8TF61 875 aa37.01■■■■□ 3.52
PROM1-209ENST00000508940 ANKLE2Q86XL3 938 aa37■■■■□ 3.51
PROM1-209ENST00000508940 EFCAB6Q5THR3 1501 aa36.92■■■■□ 3.5
PROM1-209ENST00000508940 STAG3Q9UJ98 1225 aa36.9■■■■□ 3.5
PROM1-209ENST00000508940 UNC13BO14795 1591 aa36.9■■■■□ 3.5
PROM1-209ENST00000508940 POLR1AO95602 1720 aaPredicted RBP36.89■■■■□ 3.5
PROM1-209ENST00000508940 NUP155O75694 1391 aa36.85■■■■□ 3.49
PROM1-209ENST00000508940 RPRD2Q5VT52 1461 aaKnown RBP36.85■■■■□ 3.49
PROM1-209ENST00000508940 TET3O43151 1660 aa36.85■■■■□ 3.49
PROM1-209ENST00000508940 IDI1Q13907 227 aa36.84■■■■□ 3.49
PROM1-209ENST00000508940 UBR1Q8IWV7 1749 aa36.84■■■■□ 3.49
PROM1-209ENST00000508940 NOS1P29475 1434 aa36.83■■■■□ 3.49
PROM1-209ENST00000508940 ZNF335Q9H4Z2 1342 aaPredicted RBP36.83■■■■□ 3.49
PROM1-209ENST00000508940 NEURL4Q96JN8 1562 aa36.81■■■■□ 3.48
PROM1-209ENST00000508940 SLC52A1Q9NWF4 448 aa36.8■■■■□ 3.48
PROM1-209ENST00000508940 NPHP4O75161 1426 aaPredicted RBP36.79■■■■□ 3.48
PROM1-209ENST00000508940 LTBP4Q8N2S1 1624 aa36.79■■■■□ 3.48
PROM1-209ENST00000508940 GCC2Q8IWJ2 1684 aa36.79■■■■□ 3.48
PROM1-209ENST00000508940 PIK3C2BO00750 1634 aa36.78■■■■□ 3.48
PROM1-209ENST00000508940 SYNMO15061 1565 aa36.78■■■■□ 3.48
PROM1-209ENST00000508940 IQGAP3Q86VI3 1631 aa36.77■■■■□ 3.48
PROM1-209ENST00000508940 TXNDC2Q86VQ3 553 aa36.76■■■■□ 3.48
PROM1-209ENST00000508940 EID1Q9Y6B2 187 aa36.76■■■■□ 3.48
PROM1-209ENST00000508940 MED14O60244 1454 aa36.75■■■■□ 3.47
PROM1-209ENST00000508940 NAIPQ13075 1403 aa36.73■■■■□ 3.47
PROM1-209ENST00000508940 SLIT1O75093 1534 aa36.7■■■■□ 3.47
PROM1-209ENST00000508940 SCAF11Q99590 1463 aaKnown RBP36.7■■■■□ 3.47
PROM1-209ENST00000508940 ARHGAP23Q9P227 1491 aa36.69■■■■□ 3.46
PROM1-209ENST00000508940 TMEM2Q9UHN6 1383 aa36.68■■■■□ 3.46
PROM1-209ENST00000508940 IQGAP1P46940 1657 aa36.68■■■■□ 3.46
PROM1-209ENST00000508940 LTKP29376 864 aa36.68■■■■□ 3.46
PROM1-209ENST00000508940 E9PCH4 1651 aa36.67■■■■□ 3.46
PROM1-209ENST00000508940 KDM5AP29375 1690 aaKnown RBP36.67■■■■□ 3.46
PROM1-209ENST00000508940 HFM1A2PYH4 1435 aa36.66■■■■□ 3.46
PROM1-209ENST00000508940 IQSEC2Q5JU85 1478 aa36.63■■■■□ 3.45
PROM1-209ENST00000508940 ADGRB3O60242 1522 aa36.63■■■■□ 3.45
PROM1-209ENST00000508940 TRIM52Q96A61 297 aa36.62■■■■□ 3.45
PROM1-209ENST00000508940 CHGAP10645 457 aaKnown RBP36.61■■■■□ 3.45
PROM1-209ENST00000508940 HDGFP51858 240 aaKnown RBP36.56■■■■□ 3.44
PROM1-209ENST00000508940 CPS1P31327 1500 aa36.55■■■■□ 3.44
PROM1-209ENST00000508940 BCANQ96GW7 911 aa36.5■■■■□ 3.43
PROM1-209ENST00000508940 TMEM131LA2VDJ0 1609 aa36.48■■■■□ 3.43
PROM1-209ENST00000508940 PPP1R15AO75807 674 aaPredicted RBP36.48■■■■□ 3.43
PROM1-209ENST00000508940 MYO5BQ9ULV0 1848 aa36.48■■■■□ 3.43
PROM1-209ENST00000508940 UBAP1LF5GYI3 381 aa36.46■■■■□ 3.43
PROM1-209ENST00000508940 RIMS2Q9UQ26 1411 aa36.45■■■■□ 3.43
PROM1-209ENST00000508940 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.45■■■■□ 3.43
PROM1-209ENST00000508940 SLC4A1APQ9BWU0 796 aaKnown RBP36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms