RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
SH3D19-208ENST00000508492 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
SH3D19-208ENST00000508492 CDC42BPBQ9Y5S2 1711 aa12.68□□□□□ -0.38
SH3D19-208ENST00000508492 NEO1Q92859 1461 aa12.67□□□□□ -0.38
SH3D19-208ENST00000508492 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
SH3D19-208ENST00000508492 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
SH3D19-208ENST00000508492 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
SH3D19-208ENST00000508492 FANCAO15360 1455 aa12.65□□□□□ -0.38
SH3D19-208ENST00000508492 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
SH3D19-208ENST00000508492 CLIP1P30622 1438 aa12.65□□□□□ -0.38
SH3D19-208ENST00000508492 RAPGEF3O95398 923 aa12.65□□□□□ -0.38
SH3D19-208ENST00000508492 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
SH3D19-208ENST00000508492 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
SH3D19-208ENST00000508492 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
SH3D19-208ENST00000508492 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
SH3D19-208ENST00000508492 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
SH3D19-208ENST00000508492 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
SH3D19-208ENST00000508492 BCORL1Q5H9F3 1711 aa12.6□□□□□ -0.39
SH3D19-208ENST00000508492 ADAMTSL3P82987 1691 aa12.6□□□□□ -0.39
SH3D19-208ENST00000508492 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
SH3D19-208ENST00000508492 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
SH3D19-208ENST00000508492 ZMYM4Q5VZL5 1548 aa12.59□□□□□ -0.39
SH3D19-208ENST00000508492 GABBR2O75899 941 aa12.59□□□□□ -0.39
SH3D19-208ENST00000508492 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
SH3D19-208ENST00000508492 PLCH2O75038 1416 aa12.59□□□□□ -0.39
SH3D19-208ENST00000508492 PHLDB1Q86UU1 1377 aa12.58□□□□□ -0.4
SH3D19-208ENST00000508492 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
SH3D19-208ENST00000508492 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
SH3D19-208ENST00000508492 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
SH3D19-208ENST00000508492 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
SH3D19-208ENST00000508492 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
SH3D19-208ENST00000508492 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
SH3D19-208ENST00000508492 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
SH3D19-208ENST00000508492 YEATS2Q9ULM3 1422 aa12.56□□□□□ -0.4
SH3D19-208ENST00000508492 POGZQ7Z3K3 1410 aa12.55□□□□□ -0.4
SH3D19-208ENST00000508492 LOC105371045A0A1W2PR82 267 aa12.55□□□□□ -0.4
SH3D19-208ENST00000508492 ZFYVE16Q7Z3T8 1539 aa12.55□□□□□ -0.4
SH3D19-208ENST00000508492 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
SH3D19-208ENST00000508492 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
SH3D19-208ENST00000508492 ABCC1P33527 1531 aa12.53□□□□□ -0.4
SH3D19-208ENST00000508492 SAMD9LQ8IVG5 1584 aa12.53□□□□□ -0.4
SH3D19-208ENST00000508492 HECW2Q9P2P5 1572 aa12.53□□□□□ -0.4
SH3D19-208ENST00000508492 CLCN6P51797 869 aa12.53□□□□□ -0.4
SH3D19-208ENST00000508492 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
SH3D19-208ENST00000508492 FER1L4A9Z1Z3 1794 aa12.53□□□□□ -0.4
SH3D19-208ENST00000508492 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
SH3D19-208ENST00000508492 KDM5CP41229 1560 aa12.52□□□□□ -0.4
SH3D19-208ENST00000508492 ABCA6Q8N139 1617 aa12.52□□□□□ -0.4
SH3D19-208ENST00000508492 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
SH3D19-208ENST00000508492 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
SH3D19-208ENST00000508492 TIAM1Q13009 1591 aa12.5□□□□□ -0.41
SH3D19-208ENST00000508492 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
SH3D19-208ENST00000508492 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
SH3D19-208ENST00000508492 NBR1Q14596 966 aa12.49□□□□□ -0.41
SH3D19-208ENST00000508492 SYCP2Q9BX26 1530 aa12.48□□□□□ -0.41
SH3D19-208ENST00000508492 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
SH3D19-208ENST00000508492 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
SH3D19-208ENST00000508492 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
SH3D19-208ENST00000508492 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
SH3D19-208ENST00000508492 PTPRMP28827 1452 aa12.47□□□□□ -0.41
SH3D19-208ENST00000508492 PSEN1P49768 467 aa12.47□□□□□ -0.41
SH3D19-208ENST00000508492 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
SH3D19-208ENST00000508492 MAGI2Q86UL8 1455 aa12.46□□□□□ -0.41
SH3D19-208ENST00000508492 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
SH3D19-208ENST00000508492 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
SH3D19-208ENST00000508492 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
SH3D19-208ENST00000508492 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
SH3D19-208ENST00000508492 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
SH3D19-208ENST00000508492 ATP10AO60312 1499 aa12.43□□□□□ -0.42
SH3D19-208ENST00000508492 C9orf84Q5VXU9 1444 aa12.43□□□□□ -0.42
SH3D19-208ENST00000508492 MLECQ14165 292 aa12.42□□□□□ -0.42
SH3D19-208ENST00000508492 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
SH3D19-208ENST00000508492 VPS8Q8N3P4 1428 aa12.42□□□□□ -0.42
SH3D19-208ENST00000508492 INO80Q9ULG1 1556 aaPredicted RBP12.42□□□□□ -0.42
SH3D19-208ENST00000508492 IFNL1Q8IU54 200 aa12.41□□□□□ -0.42
SH3D19-208ENST00000508492 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
SH3D19-208ENST00000508492 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.42
SH3D19-208ENST00000508492 REREQ9P2R6 1566 aa12.4□□□□□ -0.42
SH3D19-208ENST00000508492 LHX8Q68G74 356 aa12.4□□□□□ -0.42
SH3D19-208ENST00000508492 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
SH3D19-208ENST00000508492 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
SH3D19-208ENST00000508492 NCOA2Q15596 1464 aa12.4□□□□□ -0.43
SH3D19-208ENST00000508492 C3P01024 1663 aa12.39□□□□□ -0.43
SH3D19-208ENST00000508492 MAP3K13O43283 966 aa12.39□□□□□ -0.43
SH3D19-208ENST00000508492 PRKCSHP14314 528 aaPredicted RBP12.39□□□□□ -0.43
SH3D19-208ENST00000508492 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
SH3D19-208ENST00000508492 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
SH3D19-208ENST00000508492 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
SH3D19-208ENST00000508492 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
SH3D19-208ENST00000508492 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
SH3D19-208ENST00000508492 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
SH3D19-208ENST00000508492 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
SH3D19-208ENST00000508492 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
SH3D19-208ENST00000508492 CAMSAP2Q08AD1 1489 aa12.35□□□□□ -0.43
SH3D19-208ENST00000508492 CFDP1Q9UEE9 299 aaPredicted RBP12.35□□□□□ -0.43
SH3D19-208ENST00000508492 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
SH3D19-208ENST00000508492 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
SH3D19-208ENST00000508492 PREX1Q8TCU6 1659 aa12.35□□□□□ -0.43
SH3D19-208ENST00000508492 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
SH3D19-208ENST00000508492 AGLP35573 1532 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms