RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 ATP10AO60312 1499 aa21.26■□□□□ 0.99
HMGCLL1-208ENST00000508459 ARHGEF40Q8TER5 1519 aa21.24■□□□□ 0.99
HMGCLL1-208ENST00000508459 KANK1Q14678 1352 aa21.24■□□□□ 0.99
HMGCLL1-208ENST00000508459 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
HMGCLL1-208ENST00000508459 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
HMGCLL1-208ENST00000508459 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
HMGCLL1-208ENST00000508459 ABCA6Q8N139 1617 aa21.22■□□□□ 0.99
HMGCLL1-208ENST00000508459 AGLP35573 1532 aa21.19■□□□□ 0.98
HMGCLL1-208ENST00000508459 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
HMGCLL1-208ENST00000508459 UNC13BO14795 1591 aa21.19■□□□□ 0.98
HMGCLL1-208ENST00000508459 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
HMGCLL1-208ENST00000508459 COL17A1Q9UMD9 1497 aaPredicted RBP21.18■□□□□ 0.98
HMGCLL1-208ENST00000508459 DEPDC5O75140 1603 aa21.17■□□□□ 0.98
HMGCLL1-208ENST00000508459 RNF17Q9BXT8 1623 aaKnown RBP21.16■□□□□ 0.98
HMGCLL1-208ENST00000508459 CCER1Q8TC90 406 aaPredicted RBP21.16■□□□□ 0.98
HMGCLL1-208ENST00000508459 NUP155O75694 1391 aa21.14■□□□□ 0.98
HMGCLL1-208ENST00000508459 KIF3BO15066 747 aa21.14■□□□□ 0.97
HMGCLL1-208ENST00000508459 PRDM15P57071 1507 aaPredicted RBP21.14■□□□□ 0.97
HMGCLL1-208ENST00000508459 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
HMGCLL1-208ENST00000508459 IQGAP3Q86VI3 1631 aa21.12■□□□□ 0.97
HMGCLL1-208ENST00000508459 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
HMGCLL1-208ENST00000508459 ZC3H13Q5T200 1668 aaKnown RBP21.11■□□□□ 0.97
HMGCLL1-208ENST00000508459 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
HMGCLL1-208ENST00000508459 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
HMGCLL1-208ENST00000508459 MPHOSPH9Q99550 1183 aa21.08■□□□□ 0.97
HMGCLL1-208ENST00000508459 LMTK2Q8IWU2 1503 aa21.06■□□□□ 0.96
HMGCLL1-208ENST00000508459 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
HMGCLL1-208ENST00000508459 VWDEQ8N2E2 1590 aa21.05■□□□□ 0.96
HMGCLL1-208ENST00000508459 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
HMGCLL1-208ENST00000508459 TET3O43151 1660 aa21.04■□□□□ 0.96
HMGCLL1-208ENST00000508459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.96
HMGCLL1-208ENST00000508459 CNTLNQ9NXG0 1405 aa21.03■□□□□ 0.96
HMGCLL1-208ENST00000508459 PZPP20742 1482 aa21.02■□□□□ 0.96
HMGCLL1-208ENST00000508459 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.95
HMGCLL1-208ENST00000508459 GGT6Q6P531 493 aa21.01■□□□□ 0.95
HMGCLL1-208ENST00000508459 ARID4BQ4LE39 1312 aaPredicted RBP21.01■□□□□ 0.95
HMGCLL1-208ENST00000508459 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
HMGCLL1-208ENST00000508459 MROH1Q8NDA8 1641 aa20.99■□□□□ 0.95
HMGCLL1-208ENST00000508459 PKD2Q13563 968 aa20.97■□□□□ 0.95
HMGCLL1-208ENST00000508459 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
HMGCLL1-208ENST00000508459 EFCAB6Q5THR3 1501 aa20.96■□□□□ 0.95
HMGCLL1-208ENST00000508459 ABCC3O15438 1527 aa20.95■□□□□ 0.94
HMGCLL1-208ENST00000508459 MROH2AA6NES4 1674 aa20.91■□□□□ 0.94
HMGCLL1-208ENST00000508459 CAMSAP1Q5T5Y3 1602 aa20.91■□□□□ 0.94
HMGCLL1-208ENST00000508459 CEP152O94986 1710 aa20.9■□□□□ 0.94
HMGCLL1-208ENST00000508459 ANKRD30BQ9BXX2 1392 aa20.89■□□□□ 0.93
HMGCLL1-208ENST00000508459 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
HMGCLL1-208ENST00000508459 E9PCH4 1651 aa20.87■□□□□ 0.93
HMGCLL1-208ENST00000508459 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
HMGCLL1-208ENST00000508459 PTPRTO14522 1441 aa20.86■□□□□ 0.93
HMGCLL1-208ENST00000508459 TRPM2O94759 1503 aa20.85■□□□□ 0.93
HMGCLL1-208ENST00000508459 STAC3Q96MF2 364 aa20.83■□□□□ 0.93
HMGCLL1-208ENST00000508459 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.92
HMGCLL1-208ENST00000508459 FER1L4A9Z1Z3 1794 aa20.82■□□□□ 0.92
HMGCLL1-208ENST00000508459 NPATQ14207 1427 aa20.82■□□□□ 0.92
HMGCLL1-208ENST00000508459 SLC52A1Q9NWF4 448 aa20.82■□□□□ 0.92
HMGCLL1-208ENST00000508459 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
HMGCLL1-208ENST00000508459 MLECQ14165 292 aa20.81■□□□□ 0.92
HMGCLL1-208ENST00000508459 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
HMGCLL1-208ENST00000508459 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
HMGCLL1-208ENST00000508459 ZMYM3Q14202 1370 aa20.78■□□□□ 0.92
HMGCLL1-208ENST00000508459 NOS1P29475 1434 aa20.78■□□□□ 0.92
HMGCLL1-208ENST00000508459 PREX1Q8TCU6 1659 aa20.76■□□□□ 0.91
HMGCLL1-208ENST00000508459 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
HMGCLL1-208ENST00000508459 SPATA31D1Q6ZQQ2 1576 aa20.74■□□□□ 0.91
HMGCLL1-208ENST00000508459 ERVK-7P63135 1459 aa20.74■□□□□ 0.91
HMGCLL1-208ENST00000508459 NEUROD1Q13562 356 aa20.73■□□□□ 0.91
HMGCLL1-208ENST00000508459 KIF1BO60333 1816 aa20.73■□□□□ 0.91
HMGCLL1-208ENST00000508459 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
HMGCLL1-208ENST00000508459 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
HMGCLL1-208ENST00000508459 KDM5AP29375 1690 aaKnown RBP20.69■□□□□ 0.9
HMGCLL1-208ENST00000508459 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
HMGCLL1-208ENST00000508459 MADDQ8WXG6 1647 aa20.68■□□□□ 0.9
HMGCLL1-208ENST00000508459 RPGRIP1LQ68CZ1 1315 aa20.68■□□□□ 0.9
HMGCLL1-208ENST00000508459 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
HMGCLL1-208ENST00000508459 TNRQ92752 1358 aa20.67■□□□□ 0.9
HMGCLL1-208ENST00000508459 C3P01024 1663 aa20.67■□□□□ 0.9
HMGCLL1-208ENST00000508459 HDGFP51858 240 aaKnown RBP20.66■□□□□ 0.9
HMGCLL1-208ENST00000508459 CLTCL1P53675 1640 aa20.66■□□□□ 0.9
HMGCLL1-208ENST00000508459 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
HMGCLL1-208ENST00000508459 SETD1BQ9UPS6 1966 aaKnown RBP20.65■□□□□ 0.9
HMGCLL1-208ENST00000508459 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
HMGCLL1-208ENST00000508459 SYNMO15061 1565 aa20.63■□□□□ 0.89
HMGCLL1-208ENST00000508459 STAG3Q9UJ98 1225 aa20.63■□□□□ 0.89
HMGCLL1-208ENST00000508459 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
HMGCLL1-208ENST00000508459 ADGRB3O60242 1522 aa20.61■□□□□ 0.89
HMGCLL1-208ENST00000508459 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
HMGCLL1-208ENST00000508459 IDI1Q13907 227 aa20.57■□□□□ 0.88
HMGCLL1-208ENST00000508459 FBXO31Q5XUX0 539 aaPredicted RBP20.57■□□□□ 0.88
HMGCLL1-208ENST00000508459 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.57■□□□□ 0.88
HMGCLL1-208ENST00000508459 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
HMGCLL1-208ENST00000508459 PTPRMP28827 1452 aa20.56■□□□□ 0.88
HMGCLL1-208ENST00000508459 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
HMGCLL1-208ENST00000508459 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
HMGCLL1-208ENST00000508459 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
HMGCLL1-208ENST00000508459 MYOM2P54296 1465 aa20.55■□□□□ 0.88
HMGCLL1-208ENST00000508459 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
HMGCLL1-208ENST00000508459 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
HMGCLL1-208ENST00000508459 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
HMGCLL1-208ENST00000508459 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms