RNA–Protein interactions for RNA: ENST00000508278.6

MRPL48-206, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 1,560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-206ENST00000508278 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
MRPL48-206ENST00000508278 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
MRPL48-206ENST00000508278 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
MRPL48-206ENST00000508278 DNMT1P26358 1616 aaKnown RBP16.72■□□□□ 0.27
MRPL48-206ENST00000508278 WASHC2CQ9Y4E1 1318 aa16.71■□□□□ 0.27
MRPL48-206ENST00000508278 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
MRPL48-206ENST00000508278 ANKRD30AQ9BXX3 1397 aa16.69■□□□□ 0.26
MRPL48-206ENST00000508278 C3P01024 1663 aa16.69■□□□□ 0.26
MRPL48-206ENST00000508278 PTPRKQ15262 1439 aa16.69■□□□□ 0.26
MRPL48-206ENST00000508278 DUOX2Q9NRD8 1548 aa16.68■□□□□ 0.26
MRPL48-206ENST00000508278 FBXO31Q5XUX0 539 aaPredicted RBP16.68■□□□□ 0.26
MRPL48-206ENST00000508278 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
MRPL48-206ENST00000508278 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
MRPL48-206ENST00000508278 NPATQ14207 1427 aa16.67■□□□□ 0.26
MRPL48-206ENST00000508278 CROCC2H7BZ55 1655 aa16.66■□□□□ 0.26
MRPL48-206ENST00000508278 ITGAEP38570 1179 aa16.66■□□□□ 0.26
MRPL48-206ENST00000508278 ERBINQ96RT1 1412 aa16.64■□□□□ 0.26
MRPL48-206ENST00000508278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
MRPL48-206ENST00000508278 MROH2AA6NES4 1674 aa16.64■□□□□ 0.25
MRPL48-206ENST00000508278 KDM5DQ9BY66 1539 aa16.64■□□□□ 0.25
MRPL48-206ENST00000508278 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
MRPL48-206ENST00000508278 RNF17Q9BXT8 1623 aaKnown RBP16.62■□□□□ 0.25
MRPL48-206ENST00000508278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
MRPL48-206ENST00000508278 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
MRPL48-206ENST00000508278 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
MRPL48-206ENST00000508278 ABCC3O15438 1527 aa16.61■□□□□ 0.25
MRPL48-206ENST00000508278 PREX1Q8TCU6 1659 aa16.61■□□□□ 0.25
MRPL48-206ENST00000508278 PZPP20742 1482 aa16.61■□□□□ 0.25
MRPL48-206ENST00000508278 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
MRPL48-206ENST00000508278 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
MRPL48-206ENST00000508278 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
MRPL48-206ENST00000508278 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
MRPL48-206ENST00000508278 TNRQ92752 1358 aa16.58■□□□□ 0.25
MRPL48-206ENST00000508278 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
MRPL48-206ENST00000508278 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
MRPL48-206ENST00000508278 KANK1Q14678 1352 aa16.55■□□□□ 0.24
MRPL48-206ENST00000508278 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
MRPL48-206ENST00000508278 ADRA2BP18089 450 aa16.53■□□□□ 0.24
MRPL48-206ENST00000508278 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 CENPBP07199 599 aaPredicted RBP16.51■□□□□ 0.23
MRPL48-206ENST00000508278 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 DEPDC5O75140 1603 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
MRPL48-206ENST00000508278 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
MRPL48-206ENST00000508278 ACIN1Q9UKV3 1341 aaKnown RBP16.5■□□□□ 0.23
MRPL48-206ENST00000508278 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
MRPL48-206ENST00000508278 ZC3H13Q5T200 1668 aaKnown RBP16.5■□□□□ 0.23
MRPL48-206ENST00000508278 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
MRPL48-206ENST00000508278 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
MRPL48-206ENST00000508278 CEP152O94986 1710 aa16.48■□□□□ 0.23
MRPL48-206ENST00000508278 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
MRPL48-206ENST00000508278 LMTK2Q8IWU2 1503 aa16.48■□□□□ 0.23
MRPL48-206ENST00000508278 STRCQ7RTU9 1775 aa16.48■□□□□ 0.23
MRPL48-206ENST00000508278 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
MRPL48-206ENST00000508278 PKD2Q13563 968 aa16.46■□□□□ 0.23
MRPL48-206ENST00000508278 THEMISQ8N1K5 641 aaPredicted RBP16.46■□□□□ 0.23
MRPL48-206ENST00000508278 PTPRTO14522 1441 aa16.46■□□□□ 0.22
MRPL48-206ENST00000508278 ZNF142P52746 1687 aaPredicted RBP16.45■□□□□ 0.22
MRPL48-206ENST00000508278 PLA2R1Q13018 1463 aa16.45■□□□□ 0.22
MRPL48-206ENST00000508278 NUP155O75694 1391 aa16.44■□□□□ 0.22
MRPL48-206ENST00000508278 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
MRPL48-206ENST00000508278 NAIPQ13075 1403 aa16.43■□□□□ 0.22
MRPL48-206ENST00000508278 IDI1Q13907 227 aa16.43■□□□□ 0.22
MRPL48-206ENST00000508278 ANKLE2Q86XL3 938 aa16.42■□□□□ 0.22
MRPL48-206ENST00000508278 NOS1P29475 1434 aa16.41■□□□□ 0.22
MRPL48-206ENST00000508278 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
MRPL48-206ENST00000508278 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
MRPL48-206ENST00000508278 UNC13BO14795 1591 aa16.4■□□□□ 0.22
MRPL48-206ENST00000508278 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
MRPL48-206ENST00000508278 CERKQ8TCT0 537 aa16.38■□□□□ 0.21
MRPL48-206ENST00000508278 HFM1A2PYH4 1435 aa16.38■□□□□ 0.21
MRPL48-206ENST00000508278 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
MRPL48-206ENST00000508278 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
MRPL48-206ENST00000508278 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
MRPL48-206ENST00000508278 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
MRPL48-206ENST00000508278 SYNMO15061 1565 aa16.36■□□□□ 0.21
MRPL48-206ENST00000508278 LTKP29376 864 aa16.36■□□□□ 0.21
MRPL48-206ENST00000508278 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
MRPL48-206ENST00000508278 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
MRPL48-206ENST00000508278 TET3O43151 1660 aa16.34■□□□□ 0.21
MRPL48-206ENST00000508278 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
MRPL48-206ENST00000508278 TRIM52Q96A61 297 aa16.34■□□□□ 0.21
MRPL48-206ENST00000508278 NEURL4Q96JN8 1562 aa16.33■□□□□ 0.2
MRPL48-206ENST00000508278 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.2
MRPL48-206ENST00000508278 NEUROD1Q13562 356 aa16.32■□□□□ 0.2
MRPL48-206ENST00000508278 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
MRPL48-206ENST00000508278 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
MRPL48-206ENST00000508278 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
MRPL48-206ENST00000508278 MED14O60244 1454 aa16.31■□□□□ 0.2
MRPL48-206ENST00000508278 ARHGAP23Q9P227 1491 aa16.31■□□□□ 0.2
MRPL48-206ENST00000508278 PIK3C2BO00750 1634 aa16.31■□□□□ 0.2
MRPL48-206ENST00000508278 UBR1Q8IWV7 1749 aa16.3■□□□□ 0.2
MRPL48-206ENST00000508278 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
MRPL48-206ENST00000508278 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
MRPL48-206ENST00000508278 SLIT1O75093 1534 aa16.3■□□□□ 0.2
MRPL48-206ENST00000508278 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
MRPL48-206ENST00000508278 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms