RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
RAB28-205ENST00000508274 CAMSAP1Q5T5Y3 1602 aa22.36■■□□□ 1.17
RAB28-205ENST00000508274 RNF17Q9BXT8 1623 aaKnown RBP22.36■■□□□ 1.17
RAB28-205ENST00000508274 CEP170BQ9Y4F5 1589 aaPredicted RBP22.35■■□□□ 1.17
RAB28-205ENST00000508274 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
RAB28-205ENST00000508274 FAM135AQ9P2D6 1515 aa22.35■■□□□ 1.17
RAB28-205ENST00000508274 FBXO41Q8TF61 875 aa22.34■■□□□ 1.17
RAB28-205ENST00000508274 EIF2AK4Q9P2K8 1649 aaKnown RBP22.34■■□□□ 1.17
RAB28-205ENST00000508274 ABCC5O15440 1437 aa22.34■■□□□ 1.17
RAB28-205ENST00000508274 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.17
RAB28-205ENST00000508274 DNMT1P26358 1616 aaKnown RBP22.33■■□□□ 1.16
RAB28-205ENST00000508274 SHANK2Q9UPX8 1470 aa22.32■■□□□ 1.16
RAB28-205ENST00000508274 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
RAB28-205ENST00000508274 WASHC2CQ9Y4E1 1318 aa22.31■■□□□ 1.16
RAB28-205ENST00000508274 PZPP20742 1482 aa22.31■■□□□ 1.16
RAB28-205ENST00000508274 FBXO31Q5XUX0 539 aaPredicted RBP22.3■■□□□ 1.16
RAB28-205ENST00000508274 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
RAB28-205ENST00000508274 DAPK1P53355 1430 aa22.3■■□□□ 1.16
RAB28-205ENST00000508274 PTPRTO14522 1441 aa22.29■■□□□ 1.16
RAB28-205ENST00000508274 DUOX2Q9NRD8 1548 aa22.29■■□□□ 1.16
RAB28-205ENST00000508274 ABCC3O15438 1527 aa22.28■■□□□ 1.16
RAB28-205ENST00000508274 ZC3H13Q5T200 1668 aaKnown RBP22.28■■□□□ 1.16
RAB28-205ENST00000508274 KIF15Q9NS87 1388 aa22.27■■□□□ 1.16
RAB28-205ENST00000508274 CEP152O94986 1710 aa22.27■■□□□ 1.16
RAB28-205ENST00000508274 CERKQ8TCT0 537 aa22.27■■□□□ 1.16
RAB28-205ENST00000508274 TNRQ92752 1358 aa22.26■■□□□ 1.15
RAB28-205ENST00000508274 A2ML1A8K2U0 1454 aa22.25■■□□□ 1.15
RAB28-205ENST00000508274 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
RAB28-205ENST00000508274 PLA2R1Q13018 1463 aa22.25■■□□□ 1.15
RAB28-205ENST00000508274 NCKAP5LQ9HCH0 1330 aa22.24■■□□□ 1.15
RAB28-205ENST00000508274 ERBINQ96RT1 1412 aa22.21■■□□□ 1.15
RAB28-205ENST00000508274 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
RAB28-205ENST00000508274 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
RAB28-205ENST00000508274 CFAP65Q6ZU64 1925 aaKnown RBP22.2■■□□□ 1.14
RAB28-205ENST00000508274 LTBP4Q8N2S1 1624 aa22.19■■□□□ 1.14
RAB28-205ENST00000508274 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
RAB28-205ENST00000508274 DEPDC5O75140 1603 aa22.18■■□□□ 1.14
RAB28-205ENST00000508274 POLR1AO95602 1720 aaPredicted RBP22.17■■□□□ 1.14
RAB28-205ENST00000508274 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
RAB28-205ENST00000508274 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
RAB28-205ENST00000508274 ANKRD30AQ9BXX3 1397 aa22.16■■□□□ 1.14
RAB28-205ENST00000508274 PKD2Q13563 968 aa22.16■■□□□ 1.14
RAB28-205ENST00000508274 NLRP1Q9C000 1473 aa22.15■■□□□ 1.14
RAB28-205ENST00000508274 ADGRL2O95490 1459 aa22.14■■□□□ 1.13
RAB28-205ENST00000508274 NEURL4Q96JN8 1562 aa22.14■■□□□ 1.13
RAB28-205ENST00000508274 UGGT1Q9NYU2 1555 aa22.14■■□□□ 1.13
RAB28-205ENST00000508274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.12■■□□□ 1.13
RAB28-205ENST00000508274 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
RAB28-205ENST00000508274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
RAB28-205ENST00000508274 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
RAB28-205ENST00000508274 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
RAB28-205ENST00000508274 ARHGAP31Q2M1Z3 1444 aa22.07■■□□□ 1.12
RAB28-205ENST00000508274 UBR1Q8IWV7 1749 aa22.06■■□□□ 1.12
RAB28-205ENST00000508274 KANK1Q14678 1352 aa22.05■■□□□ 1.12
RAB28-205ENST00000508274 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
RAB28-205ENST00000508274 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
RAB28-205ENST00000508274 ANKRD50Q9ULJ7 1429 aa22.03■■□□□ 1.12
RAB28-205ENST00000508274 IQSEC2Q5JU85 1478 aa22.02■■□□□ 1.12
RAB28-205ENST00000508274 ANKLE2Q86XL3 938 aa22.02■■□□□ 1.12
RAB28-205ENST00000508274 IQGAP1P46940 1657 aa22■■□□□ 1.11
RAB28-205ENST00000508274 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
RAB28-205ENST00000508274 PIK3C2BO00750 1634 aa22■■□□□ 1.11
RAB28-205ENST00000508274 MED14O60244 1454 aa21.99■■□□□ 1.11
RAB28-205ENST00000508274 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
RAB28-205ENST00000508274 SYNMO15061 1565 aa21.97■■□□□ 1.11
RAB28-205ENST00000508274 UNC13BO14795 1591 aa21.95■■□□□ 1.1
RAB28-205ENST00000508274 ITGAEP38570 1179 aa21.94■■□□□ 1.1
RAB28-205ENST00000508274 ROCK1Q13464 1354 aa21.93■■□□□ 1.1
RAB28-205ENST00000508274 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
RAB28-205ENST00000508274 SLIT1O75093 1534 aa21.93■■□□□ 1.1
RAB28-205ENST00000508274 NOS1P29475 1434 aa21.92■■□□□ 1.1
RAB28-205ENST00000508274 TET3O43151 1660 aa21.92■■□□□ 1.1
RAB28-205ENST00000508274 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
RAB28-205ENST00000508274 FOXD1Q16676 465 aa21.92■■□□□ 1.1
RAB28-205ENST00000508274 STRCP1A6NGW2 1772 aa21.9■■□□□ 1.1
RAB28-205ENST00000508274 CPS1P31327 1500 aa21.9■■□□□ 1.1
RAB28-205ENST00000508274 KDM5AP29375 1690 aaKnown RBP21.9■■□□□ 1.1
RAB28-205ENST00000508274 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
RAB28-205ENST00000508274 LTKP29376 864 aa21.89■■□□□ 1.09
RAB28-205ENST00000508274 IDI1Q13907 227 aa21.89■■□□□ 1.09
RAB28-205ENST00000508274 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
RAB28-205ENST00000508274 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
RAB28-205ENST00000508274 ADGRB3O60242 1522 aa21.86■■□□□ 1.09
RAB28-205ENST00000508274 TMEM2Q9UHN6 1383 aa21.86■■□□□ 1.09
RAB28-205ENST00000508274 TXNDC2Q86VQ3 553 aa21.86■■□□□ 1.09
RAB28-205ENST00000508274 STAG3Q9UJ98 1225 aa21.86■■□□□ 1.09
RAB28-205ENST00000508274 E9PCH4 1651 aa21.86■■□□□ 1.09
RAB28-205ENST00000508274 IQGAP3Q86VI3 1631 aa21.86■■□□□ 1.09
RAB28-205ENST00000508274 RRBP1Q9P2E9 1410 aaKnown RBP21.85■■□□□ 1.09
RAB28-205ENST00000508274 MYO5BQ9ULV0 1848 aa21.84■■□□□ 1.09
RAB28-205ENST00000508274 EID1Q9Y6B2 187 aa21.81■■□□□ 1.08
RAB28-205ENST00000508274 SLC52A1Q9NWF4 448 aa21.78■■□□□ 1.08
RAB28-205ENST00000508274 NUP155O75694 1391 aa21.78■■□□□ 1.08
RAB28-205ENST00000508274 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
RAB28-205ENST00000508274 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
RAB28-205ENST00000508274 ALKQ9UM73 1620 aa21.76■■□□□ 1.07
RAB28-205ENST00000508274 XIRP1Q702N8 1843 aaKnown RBP21.73■■□□□ 1.07
RAB28-205ENST00000508274 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
RAB28-205ENST00000508274 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
RAB28-205ENST00000508274 PIP4K2BP78356 416 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms