RNA–Protein interactions for RNA: ENST00000507611.1

PRDM5-209, Transcript of PR/SET domain 5, humanhuman

TSL 2

Gene PRDM5, Length 535 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-209ENST00000507611 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
PRDM5-209ENST00000507611 GGT6Q6P531 493 aa13.75□□□□□ -0.21
PRDM5-209ENST00000507611 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
PRDM5-209ENST00000507611 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
PRDM5-209ENST00000507611 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
PRDM5-209ENST00000507611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRDM5-209ENST00000507611 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
PRDM5-209ENST00000507611 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
PRDM5-209ENST00000507611 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
PRDM5-209ENST00000507611 CLIP1P30622 1438 aa13.72□□□□□ -0.21
PRDM5-209ENST00000507611 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
PRDM5-209ENST00000507611 MED14O60244 1454 aa13.71□□□□□ -0.21
PRDM5-209ENST00000507611 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.22
PRDM5-209ENST00000507611 TNRQ92752 1358 aa13.71□□□□□ -0.22
PRDM5-209ENST00000507611 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
PRDM5-209ENST00000507611 A2MP01023 1474 aa13.68□□□□□ -0.22
PRDM5-209ENST00000507611 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
PRDM5-209ENST00000507611 CDC42BPAQ5VT25 1732 aa13.68□□□□□ -0.22
PRDM5-209ENST00000507611 FBXO31Q5XUX0 539 aaPredicted RBP13.68□□□□□ -0.22
PRDM5-209ENST00000507611 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
PRDM5-209ENST00000507611 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
PRDM5-209ENST00000507611 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
PRDM5-209ENST00000507611 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
PRDM5-209ENST00000507611 THEMISQ8N1K5 641 aaPredicted RBP13.66□□□□□ -0.22
PRDM5-209ENST00000507611 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
PRDM5-209ENST00000507611 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
PRDM5-209ENST00000507611 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
PRDM5-209ENST00000507611 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
PRDM5-209ENST00000507611 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
PRDM5-209ENST00000507611 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
PRDM5-209ENST00000507611 ZC3H13Q5T200 1668 aaKnown RBP13.63□□□□□ -0.23
PRDM5-209ENST00000507611 HNRNPMP52272 730 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRDM5-209ENST00000507611 ADGBQ8N7X0 1667 aa13.62□□□□□ -0.23
PRDM5-209ENST00000507611 PZPP20742 1482 aa13.61□□□□□ -0.23
PRDM5-209ENST00000507611 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
PRDM5-209ENST00000507611 NLRP1Q9C000 1473 aa13.6□□□□□ -0.23
PRDM5-209ENST00000507611 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
PRDM5-209ENST00000507611 MIA2Q96PC5 1412 aa13.58□□□□□ -0.24
PRDM5-209ENST00000507611 JCADQ9P266 1359 aa13.57□□□□□ -0.24
PRDM5-209ENST00000507611 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
PRDM5-209ENST00000507611 LRP6O75581 1613 aa13.56□□□□□ -0.24
PRDM5-209ENST00000507611 KDM5DQ9BY66 1539 aa13.55□□□□□ -0.24
PRDM5-209ENST00000507611 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
PRDM5-209ENST00000507611 RXRBP28702 533 aa13.54□□□□□ -0.24
PRDM5-209ENST00000507611 TMEM94Q12767 1356 aa13.52□□□□□ -0.25
PRDM5-209ENST00000507611 LRRC9Q6ZRR7 1453 aa13.51□□□□□ -0.25
PRDM5-209ENST00000507611 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
PRDM5-209ENST00000507611 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
PRDM5-209ENST00000507611 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
PRDM5-209ENST00000507611 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
PRDM5-209ENST00000507611 SETBP1Q9Y6X0 1596 aa13.5□□□□□ -0.25
PRDM5-209ENST00000507611 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
PRDM5-209ENST00000507611 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
PRDM5-209ENST00000507611 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
PRDM5-209ENST00000507611 KIF3BO15066 747 aa13.5□□□□□ -0.25
PRDM5-209ENST00000507611 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
PRDM5-209ENST00000507611 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
PRDM5-209ENST00000507611 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
PRDM5-209ENST00000507611 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
PRDM5-209ENST00000507611 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
PRDM5-209ENST00000507611 CFAP65Q6ZU64 1925 aaKnown RBP13.47□□□□□ -0.25
PRDM5-209ENST00000507611 LTKP29376 864 aa13.47□□□□□ -0.25
PRDM5-209ENST00000507611 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
PRDM5-209ENST00000507611 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
PRDM5-209ENST00000507611 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
PRDM5-209ENST00000507611 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
PRDM5-209ENST00000507611 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
PRDM5-209ENST00000507611 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
PRDM5-209ENST00000507611 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
PRDM5-209ENST00000507611 NUTM2DQ5VT03 806 aaPredicted RBP13.45□□□□□ -0.26
PRDM5-209ENST00000507611 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
PRDM5-209ENST00000507611 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
PRDM5-209ENST00000507611 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
PRDM5-209ENST00000507611 CFDP1Q9UEE9 299 aaPredicted RBP13.45□□□□□ -0.26
PRDM5-209ENST00000507611 RGS12O14924 1447 aa13.45□□□□□ -0.26
PRDM5-209ENST00000507611 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
PRDM5-209ENST00000507611 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
PRDM5-209ENST00000507611 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
PRDM5-209ENST00000507611 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
PRDM5-209ENST00000507611 EEA1Q15075 1411 aa13.42□□□□□ -0.26
PRDM5-209ENST00000507611 FGD6Q6ZV73 1430 aa13.42□□□□□ -0.26
PRDM5-209ENST00000507611 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
PRDM5-209ENST00000507611 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
PRDM5-209ENST00000507611 AFF2P51816 1311 aa13.41□□□□□ -0.26
PRDM5-209ENST00000507611 SLIT1O75093 1534 aa13.41□□□□□ -0.26
PRDM5-209ENST00000507611 CAPN15O75808 1086 aa13.41□□□□□ -0.26
PRDM5-209ENST00000507611 MSH6P52701 1360 aa13.41□□□□□ -0.26
PRDM5-209ENST00000507611 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
PRDM5-209ENST00000507611 PRDM15P57071 1507 aaPredicted RBP13.4□□□□□ -0.26
PRDM5-209ENST00000507611 KCNA6P17658 529 aa13.4□□□□□ -0.26
PRDM5-209ENST00000507611 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
PRDM5-209ENST00000507611 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
PRDM5-209ENST00000507611 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
PRDM5-209ENST00000507611 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
PRDM5-209ENST00000507611 EID1Q9Y6B2 187 aa13.38□□□□□ -0.27
PRDM5-209ENST00000507611 ABCC3O15438 1527 aa13.38□□□□□ -0.27
PRDM5-209ENST00000507611 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
PRDM5-209ENST00000507611 APLP2Q06481 763 aa13.37□□□□□ -0.27
PRDM5-209ENST00000507611 ATAD2Q6PL18 1390 aa13.36□□□□□ -0.27
PRDM5-209ENST00000507611 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms