RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 ATP10AO60312 1499 aa11.25□□□□□ -0.61
SMAD1-206ENST00000507367 UNC13BO14795 1591 aa11.24□□□□□ -0.61
SMAD1-206ENST00000507367 KIF3BO15066 747 aa11.24□□□□□ -0.61
SMAD1-206ENST00000507367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMAD1-206ENST00000507367 KDM5DQ9BY66 1539 aa11.24□□□□□ -0.61
SMAD1-206ENST00000507367 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
SMAD1-206ENST00000507367 REREQ9P2R6 1566 aa11.22□□□□□ -0.61
SMAD1-206ENST00000507367 YEATS2Q9ULM3 1422 aa11.22□□□□□ -0.61
SMAD1-206ENST00000507367 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
SMAD1-206ENST00000507367 DEPDC5O75140 1603 aa11.21□□□□□ -0.61
SMAD1-206ENST00000507367 BCORL1Q5H9F3 1711 aa11.21□□□□□ -0.62
SMAD1-206ENST00000507367 IQGAP3Q86VI3 1631 aa11.2□□□□□ -0.62
SMAD1-206ENST00000507367 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
SMAD1-206ENST00000507367 PZPP20742 1482 aa11.2□□□□□ -0.62
SMAD1-206ENST00000507367 RNF17Q9BXT8 1623 aaKnown RBP11.2□□□□□ -0.62
SMAD1-206ENST00000507367 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
SMAD1-206ENST00000507367 AGLP35573 1532 aa11.19□□□□□ -0.62
SMAD1-206ENST00000507367 PKD2Q13563 968 aa11.18□□□□□ -0.62
SMAD1-206ENST00000507367 GGT6Q6P531 493 aa11.18□□□□□ -0.62
SMAD1-206ENST00000507367 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
SMAD1-206ENST00000507367 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
SMAD1-206ENST00000507367 WASHC2CQ9Y4E1 1318 aa11.16□□□□□ -0.62
SMAD1-206ENST00000507367 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
SMAD1-206ENST00000507367 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
SMAD1-206ENST00000507367 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
SMAD1-206ENST00000507367 TET3O43151 1660 aa11.14□□□□□ -0.63
SMAD1-206ENST00000507367 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
SMAD1-206ENST00000507367 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
SMAD1-206ENST00000507367 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
SMAD1-206ENST00000507367 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
SMAD1-206ENST00000507367 FOXD1Q16676 465 aa11.13□□□□□ -0.63
SMAD1-206ENST00000507367 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
SMAD1-206ENST00000507367 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
SMAD1-206ENST00000507367 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
SMAD1-206ENST00000507367 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
SMAD1-206ENST00000507367 CCDC144AA2RUR9 1427 aa11.11□□□□□ -0.63
SMAD1-206ENST00000507367 ABCC3O15438 1527 aa11.11□□□□□ -0.63
SMAD1-206ENST00000507367 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
SMAD1-206ENST00000507367 CEP152O94986 1710 aa11.09□□□□□ -0.63
SMAD1-206ENST00000507367 MLECQ14165 292 aa11.09□□□□□ -0.63
SMAD1-206ENST00000507367 CAMSAP1Q5T5Y3 1602 aa11.09□□□□□ -0.63
SMAD1-206ENST00000507367 ARHGAP31Q2M1Z3 1444 aa11.09□□□□□ -0.63
SMAD1-206ENST00000507367 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
SMAD1-206ENST00000507367 E9PCH4 1651 aa11.08□□□□□ -0.64
SMAD1-206ENST00000507367 TRPM2O94759 1503 aa11.07□□□□□ -0.64
SMAD1-206ENST00000507367 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
SMAD1-206ENST00000507367 PTPRTO14522 1441 aa11.06□□□□□ -0.64
SMAD1-206ENST00000507367 NPATQ14207 1427 aa11.06□□□□□ -0.64
SMAD1-206ENST00000507367 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
SMAD1-206ENST00000507367 SIGLEC1Q9BZZ2 1709 aa11.04□□□□□ -0.64
SMAD1-206ENST00000507367 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
SMAD1-206ENST00000507367 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
SMAD1-206ENST00000507367 MROH2AA6NES4 1674 aa11.02□□□□□ -0.64
SMAD1-206ENST00000507367 ZMYM3Q14202 1370 aa11.01□□□□□ -0.65
SMAD1-206ENST00000507367 NOS1P29475 1434 aa11.01□□□□□ -0.65
SMAD1-206ENST00000507367 FER1L4A9Z1Z3 1794 aa11□□□□□ -0.65
SMAD1-206ENST00000507367 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
SMAD1-206ENST00000507367 STAC3Q96MF2 364 aa11□□□□□ -0.65
SMAD1-206ENST00000507367 PREX1Q8TCU6 1659 aa11□□□□□ -0.65
SMAD1-206ENST00000507367 ERVK-7P63135 1459 aa11□□□□□ -0.65
SMAD1-206ENST00000507367 NEURL4Q96JN8 1562 aa10.99□□□□□ -0.65
SMAD1-206ENST00000507367 CLTCL1P53675 1640 aa10.99□□□□□ -0.65
SMAD1-206ENST00000507367 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
SMAD1-206ENST00000507367 KIF1BO60333 1816 aa10.98□□□□□ -0.65
SMAD1-206ENST00000507367 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
SMAD1-206ENST00000507367 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
SMAD1-206ENST00000507367 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
SMAD1-206ENST00000507367 ZNF326Q5BKZ1 582 aaKnown RBP10.97□□□□□ -0.65
SMAD1-206ENST00000507367 SPATA31D1Q6ZQQ2 1576 aa10.97□□□□□ -0.65
SMAD1-206ENST00000507367 CFAP65Q6ZU64 1925 aaKnown RBP10.96□□□□□ -0.65
SMAD1-206ENST00000507367 SYNMO15061 1565 aa10.96□□□□□ -0.65
SMAD1-206ENST00000507367 SPATA31E1Q6ZUB1 1445 aa10.96□□□□□ -0.65
SMAD1-206ENST00000507367 TNRQ92752 1358 aa10.96□□□□□ -0.65
SMAD1-206ENST00000507367 FBXO31Q5XUX0 539 aaPredicted RBP10.96□□□□□ -0.65
SMAD1-206ENST00000507367 DCAF11Q8TEB1 546 aa10.96□□□□□ -0.65
SMAD1-206ENST00000507367 PIK3C2BO00750 1634 aa10.95□□□□□ -0.66
SMAD1-206ENST00000507367 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
SMAD1-206ENST00000507367 MADDQ8WXG6 1647 aa10.95□□□□□ -0.66
SMAD1-206ENST00000507367 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
SMAD1-206ENST00000507367 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
SMAD1-206ENST00000507367 IDI1Q13907 227 aa10.94□□□□□ -0.66
SMAD1-206ENST00000507367 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
SMAD1-206ENST00000507367 C3P01024 1663 aa10.93□□□□□ -0.66
SMAD1-206ENST00000507367 ADAMTSL3P82987 1691 aa10.93□□□□□ -0.66
SMAD1-206ENST00000507367 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
SMAD1-206ENST00000507367 UHRF1BP1Q6BDS2 1440 aa10.92□□□□□ -0.66
SMAD1-206ENST00000507367 RIMS1Q86UR5 1692 aaKnown RBP10.92□□□□□ -0.66
SMAD1-206ENST00000507367 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
SMAD1-206ENST00000507367 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
SMAD1-206ENST00000507367 PLPPR3Q6T4P5 718 aa10.91□□□□□ -0.66
SMAD1-206ENST00000507367 MYOM2P54296 1465 aa10.9□□□□□ -0.66
SMAD1-206ENST00000507367 CEBPAP49715 358 aaPredicted RBP10.9□□□□□ -0.66
SMAD1-206ENST00000507367 KDM5AP29375 1690 aaKnown RBP10.89□□□□□ -0.67
SMAD1-206ENST00000507367 TMEM131LA2VDJ0 1609 aa10.89□□□□□ -0.67
SMAD1-206ENST00000507367 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD1-206ENST00000507367 PRAG1Q86YV5 1406 aa10.89□□□□□ -0.67
SMAD1-206ENST00000507367 RALGAPBQ86X10 1494 aa10.87□□□□□ -0.67
SMAD1-206ENST00000507367 NBPF8Q3BBV2 869 aa10.87□□□□□ -0.67
SMAD1-206ENST00000507367 ROCK2O75116 1388 aaKnown RBP10.87□□□□□ -0.67
SMAD1-206ENST00000507367 A2ML1A8K2U0 1454 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms