RNA–Protein interactions for RNA: ENST00000507118.5

SMAD5-202, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-202ENST00000507118 PZPP20742 1482 aa36.54■■■■□ 3.44
SMAD5-202ENST00000507118 ZNF335Q9H4Z2 1342 aaPredicted RBP36.54■■■■□ 3.44
SMAD5-202ENST00000507118 KIF3BO15066 747 aa36.52■■■■□ 3.44
SMAD5-202ENST00000507118 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.43
SMAD5-202ENST00000507118 LRRC9Q6ZRR7 1453 aa36.5■■■■□ 3.43
SMAD5-202ENST00000507118 TNRQ92752 1358 aa36.47■■■■□ 3.43
SMAD5-202ENST00000507118 FBXO31Q5XUX0 539 aaPredicted RBP36.44■■■■□ 3.42
SMAD5-202ENST00000507118 DISP3Q9P2K9 1392 aa36.43■■■■□ 3.42
SMAD5-202ENST00000507118 MAST1Q9Y2H9 1570 aa36.43■■■■□ 3.42
SMAD5-202ENST00000507118 MAP3K1Q13233 1512 aa36.43■■■■□ 3.42
SMAD5-202ENST00000507118 NEURL4Q96JN8 1562 aa36.4■■■■□ 3.42
SMAD5-202ENST00000507118 WASHC2CQ9Y4E1 1318 aa36.4■■■■□ 3.42
SMAD5-202ENST00000507118 POLR1AO95602 1720 aaPredicted RBP36.4■■■■□ 3.42
SMAD5-202ENST00000507118 TSPY4P0CV99 314 aa36.4■■■■□ 3.42
SMAD5-202ENST00000507118 TSPY10P0CW01 314 aa36.4■■■■□ 3.42
SMAD5-202ENST00000507118 RNF17Q9BXT8 1623 aaKnown RBP36.4■■■■□ 3.42
SMAD5-202ENST00000507118 NLRP1Q9C000 1473 aa36.37■■■■□ 3.41
SMAD5-202ENST00000507118 MIA2Q96PC5 1412 aa36.36■■■■□ 3.41
SMAD5-202ENST00000507118 SPATA31D1Q6ZQQ2 1576 aa36.35■■■■□ 3.41
SMAD5-202ENST00000507118 ILDR2Q71H61 639 aa36.33■■■■□ 3.41
SMAD5-202ENST00000507118 EIF2AK4Q9P2K8 1649 aaKnown RBP36.32■■■■□ 3.4
SMAD5-202ENST00000507118 ABCC3O15438 1527 aa36.3■■■■□ 3.4
SMAD5-202ENST00000507118 ZC3H13Q5T200 1668 aaKnown RBP36.3■■■■□ 3.4
SMAD5-202ENST00000507118 LOC105371045A0A1W2PR82 267 aa36.3■■■■□ 3.4
SMAD5-202ENST00000507118 KANK4Q5T7N3 995 aaPredicted RBP36.3■■■■□ 3.4
SMAD5-202ENST00000507118 MYOM3Q5VTT5 1437 aa36.29■■■■□ 3.4
SMAD5-202ENST00000507118 UBAP1LF5GYI3 381 aa36.29■■■■□ 3.4
SMAD5-202ENST00000507118 CPS1P31327 1500 aa36.27■■■■□ 3.4
SMAD5-202ENST00000507118 UGGT1Q9NYU2 1555 aa36.27■■■■□ 3.4
SMAD5-202ENST00000507118 DEPDC5O75140 1603 aa36.26■■■■□ 3.4
SMAD5-202ENST00000507118 MROH1Q8NDA8 1641 aa36.26■■■■□ 3.4
SMAD5-202ENST00000507118 MED14O60244 1454 aa36.26■■■■□ 3.4
SMAD5-202ENST00000507118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.26■■■■□ 3.39
SMAD5-202ENST00000507118 THEMISQ8N1K5 641 aaPredicted RBP36.25■■■■□ 3.39
SMAD5-202ENST00000507118 SHANK2Q9UPX8 1470 aa36.24■■■■□ 3.39
SMAD5-202ENST00000507118 ANKLE2Q86XL3 938 aa36.23■■■■□ 3.39
SMAD5-202ENST00000507118 VWDEQ8N2E2 1590 aa36.2■■■■□ 3.39
SMAD5-202ENST00000507118 ERVK-7P63135 1459 aa36.18■■■■□ 3.38
SMAD5-202ENST00000507118 DUOX2Q9NRD8 1548 aa36.17■■■■□ 3.38
SMAD5-202ENST00000507118 NPHP4O75161 1426 aaPredicted RBP36.17■■■■□ 3.38
SMAD5-202ENST00000507118 SOCS7O14512 581 aa36.16■■■■□ 3.38
SMAD5-202ENST00000507118 CEP152O94986 1710 aa36.11■■■■□ 3.37
SMAD5-202ENST00000507118 IQGAP1P46940 1657 aa36.1■■■■□ 3.37
SMAD5-202ENST00000507118 CROCC2H7BZ55 1655 aa36.09■■■■□ 3.37
SMAD5-202ENST00000507118 PRDM15P57071 1507 aaPredicted RBP36.08■■■■□ 3.37
SMAD5-202ENST00000507118 ABCC5O15440 1437 aa36.07■■■■□ 3.36
SMAD5-202ENST00000507118 ARHGAP31Q2M1Z3 1444 aa36.07■■■■□ 3.36
SMAD5-202ENST00000507118 ERBINQ96RT1 1412 aa36.06■■■■□ 3.36
SMAD5-202ENST00000507118 KIF15Q9NS87 1388 aa36.04■■■■□ 3.36
SMAD5-202ENST00000507118 UBR1Q8IWV7 1749 aa36.04■■■■□ 3.36
SMAD5-202ENST00000507118 TOM1O60784 492 aa36.03■■■■□ 3.36
SMAD5-202ENST00000507118 PTPN23Q9H3S7 1636 aa36.03■■■■□ 3.36
SMAD5-202ENST00000507118 ALKQ9UM73 1620 aa36.02■■■■□ 3.36
SMAD5-202ENST00000507118 STRCP1A6NGW2 1772 aa35.99■■■■□ 3.35
SMAD5-202ENST00000507118 ARHGAP23Q9P227 1491 aa35.98■■■■□ 3.35
SMAD5-202ENST00000507118 CFAP65Q6ZU64 1925 aaKnown RBP35.97■■■■□ 3.35
SMAD5-202ENST00000507118 DAPK1P53355 1430 aa35.97■■■■□ 3.35
SMAD5-202ENST00000507118 HSPA1LP34931 641 aa35.96■■■■□ 3.35
SMAD5-202ENST00000507118 SLIT1O75093 1534 aa35.96■■■■□ 3.35
SMAD5-202ENST00000507118 FGD6Q6ZV73 1430 aa35.94■■■■□ 3.34
SMAD5-202ENST00000507118 SYNMO15061 1565 aa35.93■■■■□ 3.34
SMAD5-202ENST00000507118 SCAF11Q99590 1463 aaKnown RBP35.93■■■■□ 3.34
SMAD5-202ENST00000507118 LRRC7Q96NW7 1537 aa35.93■■■■□ 3.34
SMAD5-202ENST00000507118 PIP4K2BP78356 416 aa35.92■■■■□ 3.34
SMAD5-202ENST00000507118 RRP7BPQ9NSQ0 103 aa35.91■■■■□ 3.34
SMAD5-202ENST00000507118 SCAF1Q9H7N4 1312 aaKnown RBP35.88■■■■□ 3.33
SMAD5-202ENST00000507118 LMTK2Q8IWU2 1503 aa35.88■■■■□ 3.33
SMAD5-202ENST00000507118 APLP2Q06481 763 aa35.86■■■■□ 3.33
SMAD5-202ENST00000507118 MED1Q15648 1581 aaPredicted RBP35.85■■■■□ 3.33
SMAD5-202ENST00000507118 LTKP29376 864 aa35.85■■■■□ 3.33
SMAD5-202ENST00000507118 PIK3C2BO00750 1634 aa35.83■■■■□ 3.33
SMAD5-202ENST00000507118 KDM5AP29375 1690 aaKnown RBP35.82■■■■□ 3.33
SMAD5-202ENST00000507118 KANK1Q14678 1352 aa35.81■■■■□ 3.32
SMAD5-202ENST00000507118 ANKRD30AQ9BXX3 1397 aa35.81■■■■□ 3.32
SMAD5-202ENST00000507118 TXNDC2Q86VQ3 553 aa35.79■■■■□ 3.32
SMAD5-202ENST00000507118 TMEM2Q9UHN6 1383 aa35.77■■■■□ 3.32
SMAD5-202ENST00000507118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.77■■■■□ 3.329e-6■■■□□ 18.9
SMAD5-202ENST00000507118 ADGRL2O95490 1459 aa35.76■■■■□ 3.32
SMAD5-202ENST00000507118 NOS1P29475 1434 aa35.73■■■■□ 3.31
SMAD5-202ENST00000507118 EID1Q9Y6B2 187 aa35.72■■■■□ 3.31
SMAD5-202ENST00000507118 EFCAB6Q5THR3 1501 aa35.72■■■■□ 3.31
SMAD5-202ENST00000507118 CHIC2Q9UKJ5 165 aa35.71■■■■□ 3.31
SMAD5-202ENST00000507118 XIRP1Q702N8 1843 aaKnown RBP35.71■■■■□ 3.31
SMAD5-202ENST00000507118 IDI1Q13907 227 aa35.68■■■■□ 3.3
SMAD5-202ENST00000507118 TET3O43151 1660 aa35.64■■■■□ 3.3
SMAD5-202ENST00000507118 ADGRB3O60242 1522 aa35.62■■■■□ 3.29
SMAD5-202ENST00000507118 STAG3Q9UJ98 1225 aa35.6■■■■□ 3.29
SMAD5-202ENST00000507118 RPRD2Q5VT52 1461 aaKnown RBP35.6■■■■□ 3.29
SMAD5-202ENST00000507118 SLC52A1Q9NWF4 448 aa35.57■■■■□ 3.28
SMAD5-202ENST00000507118 ANKRD50Q9ULJ7 1429 aa35.57■■■■□ 3.28
SMAD5-202ENST00000507118 KCNA6P17658 529 aa35.53■■■■□ 3.28
SMAD5-202ENST00000507118 NWD1Q149M9 1564 aa35.51■■■■□ 3.28
SMAD5-202ENST00000507118 FAM135BQ49AJ0 1406 aa35.51■■■■□ 3.28
SMAD5-202ENST00000507118 TMEM94Q12767 1356 aa35.51■■■■□ 3.27
SMAD5-202ENST00000507118 FAM50AQ14320 339 aaKnown RBP35.48■■■■□ 3.27
SMAD5-202ENST00000507118 NKTRP30414 1462 aaKnown RBP35.48■■■■□ 3.27
SMAD5-202ENST00000507118 ZFYVE9O95405 1425 aa35.47■■■■□ 3.27
SMAD5-202ENST00000507118 SLC26A8Q96RN1 970 aa35.46■■■■□ 3.27
SMAD5-202ENST00000507118 UNC13BO14795 1591 aa35.46■■■■□ 3.27
SMAD5-202ENST00000507118 PHF23Q9BUL5 403 aaPredicted RBP35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms