RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
SNX2-205ENST00000506874 ARHGEF5Q12774 1597 aa25.72■■□□□ 1.71
SNX2-205ENST00000506874 WASHC2CQ9Y4E1 1318 aa25.71■■□□□ 1.71
SNX2-205ENST00000506874 A2ML1A8K2U0 1454 aa25.71■■□□□ 1.71
SNX2-205ENST00000506874 TCOF1Q13428 1488 aaKnown RBP25.7■■□□□ 1.7
SNX2-205ENST00000506874 KDM5DQ9BY66 1539 aa25.69■■□□□ 1.7
SNX2-205ENST00000506874 KANK4Q5T7N3 995 aaPredicted RBP25.69■■□□□ 1.7
SNX2-205ENST00000506874 TNRQ92752 1358 aa25.69■■□□□ 1.7
SNX2-205ENST00000506874 DNMT1P26358 1616 aaKnown RBP25.68■■□□□ 1.7
SNX2-205ENST00000506874 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
SNX2-205ENST00000506874 PZPP20742 1482 aa25.66■■□□□ 1.7
SNX2-205ENST00000506874 DISP3Q9P2K9 1392 aa25.64■■□□□ 1.69
SNX2-205ENST00000506874 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
SNX2-205ENST00000506874 UBAP1LF5GYI3 381 aa25.6■■□□□ 1.69
SNX2-205ENST00000506874 MAP3K1Q13233 1512 aa25.59■■□□□ 1.69
SNX2-205ENST00000506874 MYOM3Q5VTT5 1437 aa25.59■■□□□ 1.69
SNX2-205ENST00000506874 MAST1Q9Y2H9 1570 aa25.58■■□□□ 1.69
SNX2-205ENST00000506874 MIA2Q96PC5 1412 aa25.58■■□□□ 1.69
SNX2-205ENST00000506874 POLR1AO95602 1720 aaPredicted RBP25.57■■□□□ 1.68
SNX2-205ENST00000506874 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.56■■□□□ 1.68
SNX2-205ENST00000506874 RNF17Q9BXT8 1623 aaKnown RBP25.55■■□□□ 1.68
SNX2-205ENST00000506874 NEURL4Q96JN8 1562 aa25.54■■□□□ 1.68
SNX2-205ENST00000506874 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
SNX2-205ENST00000506874 ANKLE2Q86XL3 938 aa25.53■■□□□ 1.68
SNX2-205ENST00000506874 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
SNX2-205ENST00000506874 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
SNX2-205ENST00000506874 ABCC3O15438 1527 aa25.53■■□□□ 1.68
SNX2-205ENST00000506874 ILDR2Q71H61 639 aa25.52■■□□□ 1.68
SNX2-205ENST00000506874 UGGT1Q9NYU2 1555 aa25.52■■□□□ 1.68
SNX2-205ENST00000506874 APLP2Q06481 763 aa25.51■■□□□ 1.67
SNX2-205ENST00000506874 EIF2AK4Q9P2K8 1649 aaKnown RBP25.5■■□□□ 1.67
SNX2-205ENST00000506874 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
SNX2-205ENST00000506874 SPATA31D1Q6ZQQ2 1576 aa25.49■■□□□ 1.67
SNX2-205ENST00000506874 CEP152O94986 1710 aa25.48■■□□□ 1.67
SNX2-205ENST00000506874 MROH1Q8NDA8 1641 aa25.47■■□□□ 1.67
SNX2-205ENST00000506874 DUOX2Q9NRD8 1548 aa25.46■■□□□ 1.67
SNX2-205ENST00000506874 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
SNX2-205ENST00000506874 NPHP4O75161 1426 aaPredicted RBP25.45■■□□□ 1.66
SNX2-205ENST00000506874 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
SNX2-205ENST00000506874 RRP7BPQ9NSQ0 103 aa25.44■■□□□ 1.66
SNX2-205ENST00000506874 ERVK-7P63135 1459 aa25.44■■□□□ 1.66
SNX2-205ENST00000506874 PTPN23Q9H3S7 1636 aa25.44■■□□□ 1.66
SNX2-205ENST00000506874 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
SNX2-205ENST00000506874 ABCC5O15440 1437 aa25.43■■□□□ 1.66
SNX2-205ENST00000506874 CPS1P31327 1500 aa25.42■■□□□ 1.66
SNX2-205ENST00000506874 DEPDC5O75140 1603 aa25.41■■□□□ 1.66
SNX2-205ENST00000506874 PIP4K2BP78356 416 aa25.41■■□□□ 1.66
SNX2-205ENST00000506874 CROCC2H7BZ55 1655 aa25.41■■□□□ 1.66
SNX2-205ENST00000506874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.4■■□□□ 1.662e-6■□□□□ 8.7
SNX2-205ENST00000506874 VWDEQ8N2E2 1590 aa25.39■■□□□ 1.66
SNX2-205ENST00000506874 MED14O60244 1454 aa25.39■■□□□ 1.65
SNX2-205ENST00000506874 IQGAP1P46940 1657 aa25.39■■□□□ 1.65
SNX2-205ENST00000506874 TOM1O60784 492 aa25.37■■□□□ 1.65
SNX2-205ENST00000506874 DAPK1P53355 1430 aa25.37■■□□□ 1.65
SNX2-205ENST00000506874 CHIC2Q9UKJ5 165 aa25.36■■□□□ 1.65
SNX2-205ENST00000506874 FGD6Q6ZV73 1430 aa25.36■■□□□ 1.65
SNX2-205ENST00000506874 ERBINQ96RT1 1412 aa25.35■■□□□ 1.65
SNX2-205ENST00000506874 UBR1Q8IWV7 1749 aa25.34■■□□□ 1.65
SNX2-205ENST00000506874 PRDM15P57071 1507 aaPredicted RBP25.33■■□□□ 1.65
SNX2-205ENST00000506874 SOCS7O14512 581 aa25.33■■□□□ 1.65
SNX2-205ENST00000506874 HSPA1LP34931 641 aa25.33■■□□□ 1.65
SNX2-205ENST00000506874 KANK1Q14678 1352 aa25.3■■□□□ 1.64
SNX2-205ENST00000506874 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
SNX2-205ENST00000506874 STRCP1A6NGW2 1772 aa25.29■■□□□ 1.64
SNX2-205ENST00000506874 TXNDC2Q86VQ3 553 aa25.28■■□□□ 1.64
SNX2-205ENST00000506874 ANKRD30AQ9BXX3 1397 aa25.28■■□□□ 1.64
SNX2-205ENST00000506874 SCAF11Q99590 1463 aaKnown RBP25.28■■□□□ 1.64
SNX2-205ENST00000506874 LTKP29376 864 aa25.27■■□□□ 1.64
SNX2-205ENST00000506874 STAG3Q9UJ98 1225 aa25.24■■□□□ 1.63
SNX2-205ENST00000506874 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
SNX2-205ENST00000506874 FAM50AQ14320 339 aaKnown RBP25.23■■□□□ 1.63
SNX2-205ENST00000506874 PIK3C2BO00750 1634 aa25.23■■□□□ 1.63
SNX2-205ENST00000506874 ARHGAP23Q9P227 1491 aa25.22■■□□□ 1.63
SNX2-205ENST00000506874 SENP3Q9H4L4 574 aaPredicted RBP25.22■■□□□ 1.63
SNX2-205ENST00000506874 EID1Q9Y6B2 187 aa25.22■■□□□ 1.63
SNX2-205ENST00000506874 SLIT1O75093 1534 aa25.22■■□□□ 1.63
SNX2-205ENST00000506874 ALKQ9UM73 1620 aa25.21■■□□□ 1.63
SNX2-205ENST00000506874 SYNMO15061 1565 aa25.18■■□□□ 1.62
SNX2-205ENST00000506874 IDI1Q13907 227 aa25.18■■□□□ 1.62
SNX2-205ENST00000506874 TMEM2Q9UHN6 1383 aa25.17■■□□□ 1.62
SNX2-205ENST00000506874 LMTK2Q8IWU2 1503 aa25.17■■□□□ 1.62
SNX2-205ENST00000506874 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
SNX2-205ENST00000506874 ADGRL2O95490 1459 aa25.14■■□□□ 1.61
SNX2-205ENST00000506874 EFCAB6Q5THR3 1501 aa25.13■■□□□ 1.61
SNX2-205ENST00000506874 NOS1P29475 1434 aa25.09■■□□□ 1.61
SNX2-205ENST00000506874 ANKRD50Q9ULJ7 1429 aa25.09■■□□□ 1.61
SNX2-205ENST00000506874 KDM5AP29375 1690 aaKnown RBP25.08■■□□□ 1.61
SNX2-205ENST00000506874 XIRP1Q702N8 1843 aaKnown RBP25.08■■□□□ 1.61
SNX2-205ENST00000506874 SLC26A8Q96RN1 970 aa25.07■■□□□ 1.6
SNX2-205ENST00000506874 BCANQ96GW7 911 aa25.05■■□□□ 1.6
SNX2-205ENST00000506874 ADGRB3O60242 1522 aa25.05■■□□□ 1.6
SNX2-205ENST00000506874 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
SNX2-205ENST00000506874 SLC52A1Q9NWF4 448 aa25.04■■□□□ 1.6
SNX2-205ENST00000506874 KCNA6P17658 529 aa25.01■■□□□ 1.59
SNX2-205ENST00000506874 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
SNX2-205ENST00000506874 PROSER2Q86WR7 435 aaPredicted RBP25■■□□□ 1.59
SNX2-205ENST00000506874 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
SNX2-205ENST00000506874 TET3O43151 1660 aa25■■□□□ 1.59
SNX2-205ENST00000506874 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
SNX2-205ENST00000506874 RPRD2Q5VT52 1461 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms