RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
SNCA-210ENST00000506691 EHBP1L1Q8N3D4 1523 aa16.92■□□□□ 0.3
SNCA-210ENST00000506691 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
SNCA-210ENST00000506691 POLR1AO95602 1720 aaPredicted RBP16.92■□□□□ 0.3
SNCA-210ENST00000506691 PZPP20742 1482 aa16.91■□□□□ 0.3
SNCA-210ENST00000506691 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
SNCA-210ENST00000506691 GGT6Q6P531 493 aa16.9■□□□□ 0.3
SNCA-210ENST00000506691 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
SNCA-210ENST00000506691 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
SNCA-210ENST00000506691 MED14O60244 1454 aa16.88■□□□□ 0.29
SNCA-210ENST00000506691 NEURL4Q96JN8 1562 aa16.88■□□□□ 0.29
SNCA-210ENST00000506691 TOM1O60784 492 aa16.87■□□□□ 0.29
SNCA-210ENST00000506691 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
SNCA-210ENST00000506691 TNRQ92752 1358 aa16.87■□□□□ 0.29
SNCA-210ENST00000506691 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
SNCA-210ENST00000506691 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
SNCA-210ENST00000506691 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
SNCA-210ENST00000506691 ARHGEF5Q12774 1597 aa16.82■□□□□ 0.28
SNCA-210ENST00000506691 LRRC9Q6ZRR7 1453 aa16.82■□□□□ 0.28
SNCA-210ENST00000506691 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
SNCA-210ENST00000506691 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
SNCA-210ENST00000506691 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
SNCA-210ENST00000506691 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
SNCA-210ENST00000506691 VWDEQ8N2E2 1590 aa16.81■□□□□ 0.28
SNCA-210ENST00000506691 UGGT1Q9NYU2 1555 aa16.8■□□□□ 0.28
SNCA-210ENST00000506691 RNF17Q9BXT8 1623 aaKnown RBP16.78■□□□□ 0.28
SNCA-210ENST00000506691 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
SNCA-210ENST00000506691 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
SNCA-210ENST00000506691 SYNMO15061 1565 aa16.78■□□□□ 0.28
SNCA-210ENST00000506691 KIF3BO15066 747 aa16.78■□□□□ 0.28
SNCA-210ENST00000506691 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
SNCA-210ENST00000506691 CAMSAP2Q08AD1 1489 aa16.77■□□□□ 0.28
SNCA-210ENST00000506691 NPHP4O75161 1426 aaPredicted RBP16.77■□□□□ 0.27
SNCA-210ENST00000506691 EIF2AK4Q9P2K8 1649 aaKnown RBP16.77■□□□□ 0.27
SNCA-210ENST00000506691 MAST1Q9Y2H9 1570 aa16.76■□□□□ 0.27
SNCA-210ENST00000506691 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
SNCA-210ENST00000506691 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
SNCA-210ENST00000506691 HSPA1LP34931 641 aa16.75■□□□□ 0.27
SNCA-210ENST00000506691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNCA-210ENST00000506691 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
SNCA-210ENST00000506691 ALKQ9UM73 1620 aa16.73■□□□□ 0.27
SNCA-210ENST00000506691 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
SNCA-210ENST00000506691 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
SNCA-210ENST00000506691 ABCC3O15438 1527 aa16.7■□□□□ 0.26
SNCA-210ENST00000506691 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
SNCA-210ENST00000506691 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
SNCA-210ENST00000506691 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
SNCA-210ENST00000506691 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
SNCA-210ENST00000506691 ARHGAP23Q9P227 1491 aa16.67■□□□□ 0.26
SNCA-210ENST00000506691 SLIT1O75093 1534 aa16.66■□□□□ 0.26
SNCA-210ENST00000506691 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
SNCA-210ENST00000506691 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
SNCA-210ENST00000506691 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
SNCA-210ENST00000506691 MROH1Q8NDA8 1641 aa16.64■□□□□ 0.25
SNCA-210ENST00000506691 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
SNCA-210ENST00000506691 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
SNCA-210ENST00000506691 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
SNCA-210ENST00000506691 DUOX2Q9NRD8 1548 aa16.63■□□□□ 0.25
SNCA-210ENST00000506691 PRDM15P57071 1507 aaPredicted RBP16.62■□□□□ 0.25
SNCA-210ENST00000506691 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
SNCA-210ENST00000506691 ERBINQ96RT1 1412 aa16.59■□□□□ 0.25
SNCA-210ENST00000506691 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
SNCA-210ENST00000506691 FGD6Q6ZV73 1430 aa16.56■□□□□ 0.24
SNCA-210ENST00000506691 CEP152O94986 1710 aa16.56■□□□□ 0.24
SNCA-210ENST00000506691 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
SNCA-210ENST00000506691 EID1Q9Y6B2 187 aa16.54■□□□□ 0.24
SNCA-210ENST00000506691 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
SNCA-210ENST00000506691 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
SNCA-210ENST00000506691 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.24
SNCA-210ENST00000506691 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.24
SNCA-210ENST00000506691 CROCC2H7BZ55 1655 aa16.51■□□□□ 0.23
SNCA-210ENST00000506691 LTKP29376 864 aa16.51■□□□□ 0.23
SNCA-210ENST00000506691 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
SNCA-210ENST00000506691 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
SNCA-210ENST00000506691 NKTRP30414 1462 aaKnown RBP16.49■□□□□ 0.23
SNCA-210ENST00000506691 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
SNCA-210ENST00000506691 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
SNCA-210ENST00000506691 KANK1Q14678 1352 aa16.49■□□□□ 0.23
SNCA-210ENST00000506691 RRBP1Q9P2E9 1410 aaKnown RBP16.48■□□□□ 0.23
SNCA-210ENST00000506691 TET3O43151 1660 aa16.48■□□□□ 0.23
SNCA-210ENST00000506691 NWD1Q149M9 1564 aa16.47■□□□□ 0.23
SNCA-210ENST00000506691 KCNA6P17658 529 aa16.47■□□□□ 0.23
SNCA-210ENST00000506691 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
SNCA-210ENST00000506691 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
SNCA-210ENST00000506691 ABCC5O15440 1437 aa16.45■□□□□ 0.22
SNCA-210ENST00000506691 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
SNCA-210ENST00000506691 NOS1P29475 1434 aa16.45■□□□□ 0.22
SNCA-210ENST00000506691 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
SNCA-210ENST00000506691 SLC52A1Q9NWF4 448 aa16.44■□□□□ 0.22
SNCA-210ENST00000506691 NCOA3Q9Y6Q9 1424 aa16.44■□□□□ 0.22
SNCA-210ENST00000506691 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
SNCA-210ENST00000506691 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
SNCA-210ENST00000506691 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
SNCA-210ENST00000506691 DAPK1P53355 1430 aa16.42■□□□□ 0.22
SNCA-210ENST00000506691 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
SNCA-210ENST00000506691 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
SNCA-210ENST00000506691 IDI1Q13907 227 aa16.39■□□□□ 0.21
SNCA-210ENST00000506691 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
SNCA-210ENST00000506691 MSH6P52701 1360 aa16.38■□□□□ 0.21
SNCA-210ENST00000506691 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms