RNA–Protein interactions for RNA: ENST00000506649.5

CD164-208, Transcript of CD164 molecule, human

TSL 3

Gene CD164, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD164-208	ENST00000506649	PKD2	Q13563	968 aa		33.48	■■■□□ 2.95
CD164-208	ENST00000506649	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.47	■■■□□ 2.95
CD164-208	ENST00000506649	KDM5D	Q9BY66	1539 aa		33.46	■■■□□ 2.95
CD164-208	ENST00000506649	MYOM3	Q5VTT5	1437 aa		33.45	■■■□□ 2.95
CD164-208	ENST00000506649	WASHC2C	Q9Y4E1	1318 aa		33.45	■■■□□ 2.95
CD164-208	ENST00000506649	MAST1	Q9Y2H9	1570 aa		33.42	■■■□□ 2.94
CD164-208	ENST00000506649	APLP2	Q06481	763 aa		33.41	■■■□□ 2.94
CD164-208	ENST00000506649	NCKAP5L	Q9HCH0	1330 aa		33.41	■■■□□ 2.94
CD164-208	ENST00000506649	A2ML1	A8K2U0	1454 aa		33.41	■■■□□ 2.94
CD164-208	ENST00000506649	PZP	P20742	1482 aa		33.4	■■■□□ 2.94
CD164-208	ENST00000506649	LTBP4	Q8N2S1	1624 aa		33.39	■■■□□ 2.93
CD164-208	ENST00000506649	TCOF1	Q13428	1488 aa	Known RBP	33.38	■■■□□ 2.93
CD164-208	ENST00000506649	IQSEC2	Q5JU85	1478 aa		33.37	■■■□□ 2.93
CD164-208	ENST00000506649	TNR	Q92752	1358 aa		33.37	■■■□□ 2.93
CD164-208	ENST00000506649	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.34	■■■□□ 2.93
CD164-208	ENST00000506649	DNMT1	P26358	1616 aa	Known RBP	33.31	■■■□□ 2.92
CD164-208	ENST00000506649	RNF17	Q9BXT8	1623 aa	Known RBP	33.29	■■■□□ 2.92
CD164-208	ENST00000506649	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.28	■■■□□ 2.92
CD164-208	ENST00000506649	NLRP1	Q9C000	1473 aa		33.26	■■■□□ 2.92
CD164-208	ENST00000506649	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.24	■■■□□ 2.91
CD164-208	ENST00000506649	DUOX2	Q9NRD8	1548 aa		33.23	■■■□□ 2.91
CD164-208	ENST00000506649	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.23	■■■□□ 2.91
CD164-208	ENST00000506649	ZC3H13	Q5T200	1668 aa	Known RBP	33.23	■■■□□ 2.91
CD164-208	ENST00000506649	SHANK2	Q9UPX8	1470 aa		33.22	■■■□□ 2.91
CD164-208	ENST00000506649	ABCC3	O15438	1527 aa		33.21	■■■□□ 2.91
CD164-208	ENST00000506649	ABCC5	O15440	1437 aa		33.19	■■■□□ 2.9
CD164-208	ENST00000506649	ANKLE2	Q86XL3	938 aa		33.18	■■■□□ 2.9
CD164-208	ENST00000506649	PTPN23	Q9H3S7	1636 aa		33.17	■■■□□ 2.9
CD164-208	ENST00000506649	KIF15	Q9NS87	1388 aa		33.17	■■■□□ 2.9
CD164-208	ENST00000506649	FGD6	Q6ZV73	1430 aa		33.15	■■■□□ 2.9
CD164-208	ENST00000506649	UGGT1	Q9NYU2	1555 aa		33.15	■■■□□ 2.9
CD164-208	ENST00000506649	ERBIN	Q96RT1	1412 aa		33.14	■■■□□ 2.9
CD164-208	ENST00000506649	SPATA31D1	Q6ZQQ2	1576 aa		33.13	■■■□□ 2.89
CD164-208	ENST00000506649	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
CD164-208	ENST00000506649	MROH1	Q8NDA8	1641 aa		33.13	■■■□□ 2.89
CD164-208	ENST00000506649	DAPK1	P53355	1430 aa		33.11	■■■□□ 2.89
CD164-208	ENST00000506649	POLR1A	O95602	1720 aa	Predicted RBP	33.11	■■■□□ 2.89
CD164-208	ENST00000506649	CROCC2	H7BZ55	1655 aa		33.1	■■■□□ 2.89
CD164-208	ENST00000506649	RRP7BP	Q9NSQ0	103 aa		33.1	■■■□□ 2.89
CD164-208	ENST00000506649	ERVK-7	P63135	1459 aa		33.1	■■■□□ 2.89
CD164-208	ENST00000506649	NEURL4	Q96JN8	1562 aa		33.09	■■■□□ 2.89
CD164-208	ENST00000506649	PRDM15	P57071	1507 aa	Predicted RBP	33.06	■■■□□ 2.88
CD164-208	ENST00000506649	MED14	O60244	1454 aa		33.05	■■■□□ 2.88
CD164-208	ENST00000506649	ARHGAP31	Q2M1Z3	1444 aa		33.05	■■■□□ 2.88
CD164-208	ENST00000506649	DEPDC5	O75140	1603 aa		33.05	■■■□□ 2.88
CD164-208	ENST00000506649	ANKRD30A	Q9BXX3	1397 aa		33.05	■■■□□ 2.88
CD164-208	ENST00000506649	UBAP1L	F5GYI3	381 aa		33.03	■■■□□ 2.88
CD164-208	ENST00000506649	CPS1	P31327	1500 aa		33.02	■■■□□ 2.88
CD164-208	ENST00000506649	NPHP4	O75161	1426 aa	Predicted RBP	33.02	■■■□□ 2.88
CD164-208	ENST00000506649	KANK1	Q14678	1352 aa		33.01	■■■□□ 2.88
CD164-208	ENST00000506649	CEP152	O94986	1710 aa		33.01	■■■□□ 2.87
CD164-208	ENST00000506649	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.96	■■■□□ 2.87	5e-8	■□□□□ 8.7
CD164-208	ENST00000506649	CHIC2	Q9UKJ5	165 aa		32.95	■■■□□ 2.87
CD164-208	ENST00000506649	DISP3	Q9P2K9	1392 aa		32.92	■■■□□ 2.86
CD164-208	ENST00000506649	VWDE	Q8N2E2	1590 aa		32.91	■■■□□ 2.86
CD164-208	ENST00000506649	ADGRL2	O95490	1459 aa		32.9	■■■□□ 2.86
CD164-208	ENST00000506649	IQGAP1	P46940	1657 aa		32.89	■■■□□ 2.86
CD164-208	ENST00000506649	LMTK2	Q8IWU2	1503 aa		32.89	■■■□□ 2.86
CD164-208	ENST00000506649	TOM1	O60784	492 aa		32.89	■■■□□ 2.86
CD164-208	ENST00000506649	UBR1	Q8IWV7	1749 aa		32.88	■■■□□ 2.85
CD164-208	ENST00000506649	FAM50A	Q14320	339 aa	Known RBP	32.87	■■■□□ 2.85
CD164-208	ENST00000506649	CFAP65	Q6ZU64	1925 aa	Known RBP	32.87	■■■□□ 2.85
CD164-208	ENST00000506649	SCAF11	Q99590	1463 aa	Known RBP	32.85	■■■□□ 2.85
CD164-208	ENST00000506649	SLIT1	O75093	1534 aa		32.84	■■■□□ 2.85
CD164-208	ENST00000506649	ARHGAP23	Q9P227	1491 aa		32.84	■■■□□ 2.85
CD164-208	ENST00000506649	EID1	Q9Y6B2	187 aa		32.82	■■■□□ 2.84
CD164-208	ENST00000506649	TXNDC2	Q86VQ3	553 aa		32.81	■■■□□ 2.84
CD164-208	ENST00000506649	STAG3	Q9UJ98	1225 aa		32.79	■■■□□ 2.84
CD164-208	ENST00000506649	ANKRD50	Q9ULJ7	1429 aa		32.77	■■■□□ 2.84
CD164-208	ENST00000506649	LTK	P29376	864 aa		32.77	■■■□□ 2.84
CD164-208	ENST00000506649	TMEM2	Q9UHN6	1383 aa		32.75	■■■□□ 2.83
CD164-208	ENST00000506649	IDI1	Q13907	227 aa		32.74	■■■□□ 2.83
CD164-208	ENST00000506649	SCAF1	Q9H7N4	1312 aa	Known RBP	32.74	■■■□□ 2.83
CD164-208	ENST00000506649	PIK3C2B	O00750	1634 aa		32.73	■■■□□ 2.83
CD164-208	ENST00000506649	EFCAB6	Q5THR3	1501 aa		32.73	■■■□□ 2.83
CD164-208	ENST00000506649	KDM5A	P29375	1690 aa	Known RBP	32.73	■■■□□ 2.83
CD164-208	ENST00000506649	PIP4K2B	P78356	416 aa		32.73	■■■□□ 2.83
CD164-208	ENST00000506649	NOS1	P29475	1434 aa		32.73	■■■□□ 2.83
CD164-208	ENST00000506649	SLC52A1	Q9NWF4	448 aa		32.71	■■■□□ 2.83
CD164-208	ENST00000506649	SYNM	O15061	1565 aa		32.7	■■■□□ 2.83
CD164-208	ENST00000506649	RPRD2	Q5VT52	1461 aa	Known RBP	32.7	■■■□□ 2.83
CD164-208	ENST00000506649	LRRC7	Q96NW7	1537 aa		32.7	■■■□□ 2.83
CD164-208	ENST00000506649	ILDR2	Q71H61	639 aa		32.66	■■■□□ 2.82
CD164-208	ENST00000506649	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.66	■■■□□ 2.82
CD164-208	ENST00000506649	HSPA1L	P34931	641 aa		32.65	■■■□□ 2.82
CD164-208	ENST00000506649	ROCK1	Q13464	1354 aa		32.65	■■■□□ 2.82
CD164-208	ENST00000506649	STRCP1	A6NGW2	1772 aa		32.65	■■■□□ 2.82
CD164-208	ENST00000506649	ADGRB3	O60242	1522 aa		32.6	■■■□□ 2.81
CD164-208	ENST00000506649	TET3	O43151	1660 aa		32.58	■■■□□ 2.81
CD164-208	ENST00000506649	ALK	Q9UM73	1620 aa		32.58	■■■□□ 2.81
CD164-208	ENST00000506649	UNC13B	O14795	1591 aa		32.55	■■■□□ 2.8
CD164-208	ENST00000506649	SOCS7	O14512	581 aa		32.55	■■■□□ 2.8
CD164-208	ENST00000506649	HDGF	P51858	240 aa	Known RBP	32.53	■■■□□ 2.8
CD164-208	ENST00000506649	KCNA6	P17658	529 aa		32.52	■■■□□ 2.8
CD164-208	ENST00000506649	GCC2	Q8IWJ2	1684 aa		32.5	■■■□□ 2.79
CD164-208	ENST00000506649	SLC26A8	Q96RN1	970 aa		32.47	■■■□□ 2.79
CD164-208	ENST00000506649	ZFYVE9	O95405	1425 aa		32.44	■■■□□ 2.78
CD164-208	ENST00000506649	BCAN	Q96GW7	911 aa		32.44	■■■□□ 2.78
CD164-208	ENST00000506649	ITGAE	P38570	1179 aa		32.43	■■■□□ 2.78
CD164-208	ENST00000506649	PLEKHG1	Q9ULL1	1385 aa		32.43	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms