RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
SMAD1-205ENST00000506626 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
SMAD1-205ENST00000506626 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
SMAD1-205ENST00000506626 KCNC4Q03721 635 aa9.52□□□□□ -0.89
SMAD1-205ENST00000506626 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
SMAD1-205ENST00000506626 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
SMAD1-205ENST00000506626 MFSD10Q14728 455 aa9.51□□□□□ -0.89
SMAD1-205ENST00000506626 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
SMAD1-205ENST00000506626 ZFRQ96KR1 1074 aaKnown RBP9.51□□□□□ -0.89
SMAD1-205ENST00000506626 CADPS2Q86UW7 1296 aa9.48□□□□□ -0.89
SMAD1-205ENST00000506626 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
SMAD1-205ENST00000506626 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
SMAD1-205ENST00000506626 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
SMAD1-205ENST00000506626 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
SMAD1-205ENST00000506626 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
SMAD1-205ENST00000506626 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
SMAD1-205ENST00000506626 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-205ENST00000506626 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
SMAD1-205ENST00000506626 PHF14O94880 888 aa9.44□□□□□ -0.9
SMAD1-205ENST00000506626 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
SMAD1-205ENST00000506626 SEPT9Q9UHD8 586 aaPredicted RBP9.44□□□□□ -0.9
SMAD1-205ENST00000506626 GFRA3O60609 400 aa9.43□□□□□ -0.9
SMAD1-205ENST00000506626 TSR3Q9UJK0 312 aaKnown RBP9.42□□□□□ -0.9
SMAD1-205ENST00000506626 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
SMAD1-205ENST00000506626 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
SMAD1-205ENST00000506626 C6orf132Q5T0Z8 1188 aa9.39□□□□□ -0.91
SMAD1-205ENST00000506626 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
SMAD1-205ENST00000506626 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-205ENST00000506626 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
SMAD1-205ENST00000506626 NRG2O14511 850 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-205ENST00000506626 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
SMAD1-205ENST00000506626 CAMK2BQ13554 666 aa9.36□□□□□ -0.91
SMAD1-205ENST00000506626 TJAP1Q5JTD0 557 aa9.35□□□□□ -0.91
SMAD1-205ENST00000506626 EPAS1Q99814 870 aa9.35□□□□□ -0.91
SMAD1-205ENST00000506626 PRKD2Q9BZL6 878 aa9.35□□□□□ -0.91
SMAD1-205ENST00000506626 SPRYD3Q8NCJ5 442 aa9.34□□□□□ -0.91
SMAD1-205ENST00000506626 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-205ENST00000506626 DPYSL4O14531 572 aa9.31□□□□□ -0.92
SMAD1-205ENST00000506626 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
SMAD1-205ENST00000506626 PPP1R18Q6NYC8 613 aa9.29□□□□□ -0.92
SMAD1-205ENST00000506626 TSKSQ9UJT2 592 aa9.29□□□□□ -0.92
SMAD1-205ENST00000506626 PPP4CP60510 307 aa9.27□□□□□ -0.93
SMAD1-205ENST00000506626 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
SMAD1-205ENST00000506626 MTRQ99707 1265 aa9.27□□□□□ -0.93
SMAD1-205ENST00000506626 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
SMAD1-205ENST00000506626 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
SMAD1-205ENST00000506626 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
SMAD1-205ENST00000506626 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
SMAD1-205ENST00000506626 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
SMAD1-205ENST00000506626 SAMD7Q7Z3H4 446 aa9.23□□□□□ -0.93
SMAD1-205ENST00000506626 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
SMAD1-205ENST00000506626 EN1Q05925 392 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-205ENST00000506626 TSR1Q2NL82 804 aaKnown RBP9.22□□□□□ -0.93
SMAD1-205ENST00000506626 DDX12PQ92771 950 aa9.22□□□□□ -0.93
SMAD1-205ENST00000506626 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.22□□□□□ -0.93
SMAD1-205ENST00000506626 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
SMAD1-205ENST00000506626 PDIA6Q15084 440 aa9.21□□□□□ -0.94
SMAD1-205ENST00000506626 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
SMAD1-205ENST00000506626 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
SMAD1-205ENST00000506626 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
SMAD1-205ENST00000506626 SMAPO00193 183 aa9.19□□□□□ -0.94
SMAD1-205ENST00000506626 E2F4Q16254 413 aa9.19□□□□□ -0.94
SMAD1-205ENST00000506626 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
SMAD1-205ENST00000506626 NBR1Q14596 966 aa9.17□□□□□ -0.94
SMAD1-205ENST00000506626 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
SMAD1-205ENST00000506626 WDR70Q9NW82 654 aa9.17□□□□□ -0.94
SMAD1-205ENST00000506626 MAP3K7O43318 606 aa9.16□□□□□ -0.94
SMAD1-205ENST00000506626 APLP1P51693 650 aa9.16□□□□□ -0.94
SMAD1-205ENST00000506626 NKX2-3Q8TAU0 364 aa9.16□□□□□ -0.94
SMAD1-205ENST00000506626 ARIH1Q9Y4X5 557 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-205ENST00000506626 PRSS12P56730 875 aa9.15□□□□□ -0.94
SMAD1-205ENST00000506626 TRIM67Q6ZTA4 783 aa9.15□□□□□ -0.94
SMAD1-205ENST00000506626 TATDN2Q93075 761 aa9.12□□□□□ -0.95
SMAD1-205ENST00000506626 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
SMAD1-205ENST00000506626 PRIM1P49642 420 aaKnown RBP9.11□□□□□ -0.95
SMAD1-205ENST00000506626 TMUB1Q9BVT8 246 aa9.1□□□□□ -0.95
SMAD1-205ENST00000506626 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
SMAD1-205ENST00000506626 GGCXP38435 758 aa9.09□□□□□ -0.95
SMAD1-205ENST00000506626 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
SMAD1-205ENST00000506626 EMID1Q96A84 441 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-205ENST00000506626 GRXCR2A6NFK2 248 aa9.08□□□□□ -0.96
SMAD1-205ENST00000506626 MYT1Q01538 1121 aa9.08□□□□□ -0.96
SMAD1-205ENST00000506626 POTECB2RU33 542 aa9.06□□□□□ -0.96
SMAD1-205ENST00000506626 RNF40O75150 1001 aa9.06□□□□□ -0.96
SMAD1-205ENST00000506626 COPS2P61201 443 aa9.06□□□□□ -0.96
SMAD1-205ENST00000506626 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
SMAD1-205ENST00000506626 NUDT18Q6ZVK8 323 aa9.05□□□□□ -0.96
SMAD1-205ENST00000506626 TSHZ2Q9NRE2 1034 aa9.05□□□□□ -0.96
SMAD1-205ENST00000506626 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
SMAD1-205ENST00000506626 DGAT1O75907 488 aa9.04□□□□□ -0.96
SMAD1-205ENST00000506626 OSBPP22059 807 aa9.04□□□□□ -0.96
SMAD1-205ENST00000506626 ZPR1O75312 459 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 PRR20EP86478 221 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 PRR20CP86479 221 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 PRR20DP86480 221 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 PRR20BP86481 221 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 PRR20AP86496 221 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
SMAD1-205ENST00000506626 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms