RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 KDM5DQ9BY66 1539 aa26.98■■□□□ 1.91
AP3S1-204ENST00000506430 PTPRTO14522 1441 aa26.98■■□□□ 1.91
AP3S1-204ENST00000506430 ABCC5O15440 1437 aa26.98■■□□□ 1.91
AP3S1-204ENST00000506430 MYO3AQ8NEV4 1616 aa26.97■■□□□ 1.91
AP3S1-204ENST00000506430 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
AP3S1-204ENST00000506430 PTPN23Q9H3S7 1636 aa26.96■■□□□ 1.91
AP3S1-204ENST00000506430 FGD6Q6ZV73 1430 aa26.96■■□□□ 1.91
AP3S1-204ENST00000506430 CEP170BQ9Y4F5 1589 aaPredicted RBP26.93■■□□□ 1.9
AP3S1-204ENST00000506430 RRP7BPQ9NSQ0 103 aa26.93■■□□□ 1.9
AP3S1-204ENST00000506430 PZPP20742 1482 aa26.93■■□□□ 1.9
AP3S1-204ENST00000506430 FAM135AQ9P2D6 1515 aa26.91■■□□□ 1.9
AP3S1-204ENST00000506430 TNRQ92752 1358 aa26.91■■□□□ 1.9
AP3S1-204ENST00000506430 ZNF142P52746 1687 aaPredicted RBP26.91■■□□□ 1.9
AP3S1-204ENST00000506430 TCOF1Q13428 1488 aaKnown RBP26.9■■□□□ 1.9
AP3S1-204ENST00000506430 DAPK1P53355 1430 aa26.9■■□□□ 1.9
AP3S1-204ENST00000506430 KIF15Q9NS87 1388 aa26.89■■□□□ 1.9
AP3S1-204ENST00000506430 RNF17Q9BXT8 1623 aaKnown RBP26.89■■□□□ 1.9
AP3S1-204ENST00000506430 DUOX2Q9NRD8 1548 aa26.89■■□□□ 1.89
AP3S1-204ENST00000506430 SHANK2Q9UPX8 1470 aa26.88■■□□□ 1.89
AP3S1-204ENST00000506430 A2ML1A8K2U0 1454 aa26.87■■□□□ 1.89
AP3S1-204ENST00000506430 CHIC2Q9UKJ5 165 aa26.87■■□□□ 1.89
AP3S1-204ENST00000506430 PLA2R1Q13018 1463 aa26.87■■□□□ 1.89
AP3S1-204ENST00000506430 EIF2AK4Q9P2K8 1649 aaKnown RBP26.86■■□□□ 1.89
AP3S1-204ENST00000506430 ABCC3O15438 1527 aa26.85■■□□□ 1.89
AP3S1-204ENST00000506430 PKD2Q13563 968 aa26.85■■□□□ 1.89
AP3S1-204ENST00000506430 CROCC2H7BZ55 1655 aa26.85■■□□□ 1.89
AP3S1-204ENST00000506430 DNMT1P26358 1616 aaKnown RBP26.84■■□□□ 1.89
AP3S1-204ENST00000506430 MROH1Q8NDA8 1641 aa26.84■■□□□ 1.89
AP3S1-204ENST00000506430 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
AP3S1-204ENST00000506430 ERBINQ96RT1 1412 aa26.8■■□□□ 1.88
AP3S1-204ENST00000506430 LTBP4Q8N2S1 1624 aa26.79■■□□□ 1.88
AP3S1-204ENST00000506430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.78■■□□□ 1.88
AP3S1-204ENST00000506430 ANKRD30AQ9BXX3 1397 aa26.78■■□□□ 1.88
AP3S1-204ENST00000506430 ZC3H13Q5T200 1668 aaKnown RBP26.77■■□□□ 1.88
AP3S1-204ENST00000506430 ZNF335Q9H4Z2 1342 aaPredicted RBP26.77■■□□□ 1.88
AP3S1-204ENST00000506430 NLRP1Q9C000 1473 aa26.75■■□□□ 1.87
AP3S1-204ENST00000506430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.75■■□□□ 1.87
AP3S1-204ENST00000506430 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
AP3S1-204ENST00000506430 CEP152O94986 1710 aa26.73■■□□□ 1.87
AP3S1-204ENST00000506430 ERVK-7P63135 1459 aa26.73■■□□□ 1.87
AP3S1-204ENST00000506430 SPATA31D1Q6ZQQ2 1576 aa26.72■■□□□ 1.87
AP3S1-204ENST00000506430 PRDM15P57071 1507 aaPredicted RBP26.72■■□□□ 1.87
AP3S1-204ENST00000506430 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
AP3S1-204ENST00000506430 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
AP3S1-204ENST00000506430 ANKLE2Q86XL3 938 aa26.7■■□□□ 1.86
AP3S1-204ENST00000506430 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
AP3S1-204ENST00000506430 CFAP65Q6ZU64 1925 aaKnown RBP26.67■■□□□ 1.86
AP3S1-204ENST00000506430 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
AP3S1-204ENST00000506430 ARHGAP31Q2M1Z3 1444 aa26.66■■□□□ 1.86
AP3S1-204ENST00000506430 DEPDC5O75140 1603 aa26.66■■□□□ 1.86
AP3S1-204ENST00000506430 KANK1Q14678 1352 aa26.65■■□□□ 1.86
AP3S1-204ENST00000506430 POLR1AO95602 1720 aaPredicted RBP26.62■■□□□ 1.85
AP3S1-204ENST00000506430 IQSEC2Q5JU85 1478 aa26.61■■□□□ 1.85
AP3S1-204ENST00000506430 ANKRD50Q9ULJ7 1429 aa26.6■■□□□ 1.85
AP3S1-204ENST00000506430 VWDEQ8N2E2 1590 aa26.58■■□□□ 1.85
AP3S1-204ENST00000506430 NPHP4O75161 1426 aaPredicted RBP26.58■■□□□ 1.85
AP3S1-204ENST00000506430 LMTK2Q8IWU2 1503 aa26.58■■□□□ 1.85
AP3S1-204ENST00000506430 MED14O60244 1454 aa26.57■■□□□ 1.84
AP3S1-204ENST00000506430 UBR1Q8IWV7 1749 aa26.54■■□□□ 1.84
AP3S1-204ENST00000506430 ITGAEP38570 1179 aa26.54■■□□□ 1.84
AP3S1-204ENST00000506430 LTKP29376 864 aa26.52■■□□□ 1.84
AP3S1-204ENST00000506430 IDI1Q13907 227 aa26.52■■□□□ 1.84
AP3S1-204ENST00000506430 UBAP1LF5GYI3 381 aa26.51■■□□□ 1.83
AP3S1-204ENST00000506430 TXNDC2Q86VQ3 553 aa26.5■■□□□ 1.83
AP3S1-204ENST00000506430 STAG3Q9UJ98 1225 aa26.49■■□□□ 1.83
AP3S1-204ENST00000506430 EFCAB6Q5THR3 1501 aa26.49■■□□□ 1.83
AP3S1-204ENST00000506430 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
AP3S1-204ENST00000506430 IQGAP1P46940 1657 aa26.48■■□□□ 1.83
AP3S1-204ENST00000506430 ARHGAP23Q9P227 1491 aa26.48■■□□□ 1.83
AP3S1-204ENST00000506430 PIK3C2BO00750 1634 aa26.47■■□□□ 1.83
AP3S1-204ENST00000506430 NOS1P29475 1434 aa26.47■■□□□ 1.83
AP3S1-204ENST00000506430 SLIT1O75093 1534 aa26.46■■□□□ 1.83
AP3S1-204ENST00000506430 SCAF11Q99590 1463 aaKnown RBP26.46■■□□□ 1.83
AP3S1-204ENST00000506430 SYNMO15061 1565 aa26.46■■□□□ 1.83
AP3S1-204ENST00000506430 CPS1P31327 1500 aa26.45■■□□□ 1.83
AP3S1-204ENST00000506430 TMEM2Q9UHN6 1383 aa26.44■■□□□ 1.82
AP3S1-204ENST00000506430 EID1Q9Y6B2 187 aa26.43■■□□□ 1.82
AP3S1-204ENST00000506430 SLC52A1Q9NWF4 448 aa26.41■■□□□ 1.82
AP3S1-204ENST00000506430 RPRD2Q5VT52 1461 aaKnown RBP26.39■■□□□ 1.82
AP3S1-204ENST00000506430 UNC13BO14795 1591 aa26.38■■□□□ 1.81
AP3S1-204ENST00000506430 TET3O43151 1660 aa26.36■■□□□ 1.81
AP3S1-204ENST00000506430 STRCP1A6NGW2 1772 aa26.35■■□□□ 1.81
AP3S1-204ENST00000506430 PIP4K2BP78356 416 aa26.35■■□□□ 1.81
AP3S1-204ENST00000506430 NUP155O75694 1391 aa26.34■■□□□ 1.81
AP3S1-204ENST00000506430 TOM1O60784 492 aa26.34■■□□□ 1.81
AP3S1-204ENST00000506430 KDM5AP29375 1690 aaKnown RBP26.34■■□□□ 1.81
AP3S1-204ENST00000506430 RRBP1Q9P2E9 1410 aaKnown RBP26.33■■□□□ 1.81
AP3S1-204ENST00000506430 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.81
AP3S1-204ENST00000506430 ADGRB3O60242 1522 aa26.32■■□□□ 1.8
AP3S1-204ENST00000506430 LRRC7Q96NW7 1537 aa26.32■■□□□ 1.8
AP3S1-204ENST00000506430 GCC2Q8IWJ2 1684 aa26.29■■□□□ 1.8
AP3S1-204ENST00000506430 SLC26A8Q96RN1 970 aa26.29■■□□□ 1.8
AP3S1-204ENST00000506430 IQGAP3Q86VI3 1631 aa26.28■■□□□ 1.8
AP3S1-204ENST00000506430 E9PCH4 1651 aa26.28■■□□□ 1.8
AP3S1-204ENST00000506430 SENP3Q9H4L4 574 aaPredicted RBP26.27■■□□□ 1.8
AP3S1-204ENST00000506430 DISP3Q9P2K9 1392 aa26.25■■□□□ 1.79
AP3S1-204ENST00000506430 CHGAP10645 457 aaKnown RBP26.25■■□□□ 1.79
AP3S1-204ENST00000506430 HSPA1LP34931 641 aa26.24■■□□□ 1.79
AP3S1-204ENST00000506430 BCANQ96GW7 911 aa26.24■■□□□ 1.79
AP3S1-204ENST00000506430 ALKQ9UM73 1620 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms