RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
SGCA-205ENST00000505964 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
SGCA-205ENST00000505964 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
SGCA-205ENST00000505964 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
SGCA-205ENST00000505964 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
SGCA-205ENST00000505964 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
SGCA-205ENST00000505964 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
SGCA-205ENST00000505964 DAPK1P53355 1430 aa17.06■□□□□ 0.32
SGCA-205ENST00000505964 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
SGCA-205ENST00000505964 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
SGCA-205ENST00000505964 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
SGCA-205ENST00000505964 MBD5Q9P267 1494 aa17.05■□□□□ 0.32
SGCA-205ENST00000505964 ABCC5O15440 1437 aa17.04■□□□□ 0.32
SGCA-205ENST00000505964 PLA2R1Q13018 1463 aa17.04■□□□□ 0.32
SGCA-205ENST00000505964 SHANK2Q9UPX8 1470 aa17.04■□□□□ 0.32
SGCA-205ENST00000505964 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
SGCA-205ENST00000505964 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
SGCA-205ENST00000505964 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
SGCA-205ENST00000505964 GGT6Q6P531 493 aa17.03■□□□□ 0.32
SGCA-205ENST00000505964 A2MP01023 1474 aa17.03■□□□□ 0.32
SGCA-205ENST00000505964 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
SGCA-205ENST00000505964 PKD2Q13563 968 aa17.02■□□□□ 0.32
SGCA-205ENST00000505964 ITGAEP38570 1179 aa17.01■□□□□ 0.31
SGCA-205ENST00000505964 MED1Q15648 1581 aaPredicted RBP17.01■□□□□ 0.31
SGCA-205ENST00000505964 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
SGCA-205ENST00000505964 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
SGCA-205ENST00000505964 PIP4K2BP78356 416 aa17■□□□□ 0.31
SGCA-205ENST00000505964 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
SGCA-205ENST00000505964 ROCK1Q13464 1354 aa17■□□□□ 0.31
SGCA-205ENST00000505964 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
SGCA-205ENST00000505964 HSPA1LP34931 641 aa16.98■□□□□ 0.31
SGCA-205ENST00000505964 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
SGCA-205ENST00000505964 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.31
SGCA-205ENST00000505964 NEURL4Q96JN8 1562 aa16.96■□□□□ 0.31
SGCA-205ENST00000505964 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
SGCA-205ENST00000505964 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
SGCA-205ENST00000505964 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
SGCA-205ENST00000505964 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
SGCA-205ENST00000505964 NAIPQ13075 1403 aa16.92■□□□□ 0.3
SGCA-205ENST00000505964 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
SGCA-205ENST00000505964 HRCP23327 699 aa16.91■□□□□ 0.3
SGCA-205ENST00000505964 CPS1P31327 1500 aa16.91■□□□□ 0.3
SGCA-205ENST00000505964 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
SGCA-205ENST00000505964 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
SGCA-205ENST00000505964 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
SGCA-205ENST00000505964 TOM1O60784 492 aa16.89■□□□□ 0.29
SGCA-205ENST00000505964 STRCP1A6NGW2 1772 aa16.88■□□□□ 0.29
SGCA-205ENST00000505964 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
SGCA-205ENST00000505964 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
SGCA-205ENST00000505964 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
SGCA-205ENST00000505964 CFAP65Q6ZU64 1925 aaKnown RBP16.88■□□□□ 0.29
SGCA-205ENST00000505964 TNRQ92752 1358 aa16.88■□□□□ 0.29
SGCA-205ENST00000505964 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
SGCA-205ENST00000505964 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
SGCA-205ENST00000505964 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
SGCA-205ENST00000505964 PZPP20742 1482 aa16.85■□□□□ 0.29
SGCA-205ENST00000505964 KDM5DQ9BY66 1539 aa16.85■□□□□ 0.29
SGCA-205ENST00000505964 KIF3BO15066 747 aa16.84■□□□□ 0.29
SGCA-205ENST00000505964 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
SGCA-205ENST00000505964 IQGAP1P46940 1657 aa16.84■□□□□ 0.29
SGCA-205ENST00000505964 DUOX2Q9NRD8 1548 aa16.83■□□□□ 0.28
SGCA-205ENST00000505964 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
SGCA-205ENST00000505964 UGGT1Q9NYU2 1555 aa16.82■□□□□ 0.28
SGCA-205ENST00000505964 ANKLE2Q86XL3 938 aa16.82■□□□□ 0.28
SGCA-205ENST00000505964 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
SGCA-205ENST00000505964 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
SGCA-205ENST00000505964 NPHP4O75161 1426 aaPredicted RBP16.8■□□□□ 0.28
SGCA-205ENST00000505964 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
SGCA-205ENST00000505964 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
SGCA-205ENST00000505964 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
SGCA-205ENST00000505964 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
SGCA-205ENST00000505964 THEMISQ8N1K5 641 aaPredicted RBP16.77■□□□□ 0.28
SGCA-205ENST00000505964 MED14O60244 1454 aa16.77■□□□□ 0.28
SGCA-205ENST00000505964 NLRP1Q9C000 1473 aa16.77■□□□□ 0.28
SGCA-205ENST00000505964 RNF17Q9BXT8 1623 aaKnown RBP16.77■□□□□ 0.27
SGCA-205ENST00000505964 UNC13BO14795 1591 aa16.75■□□□□ 0.27
SGCA-205ENST00000505964 CEP152O94986 1710 aa16.75■□□□□ 0.27
SGCA-205ENST00000505964 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
SGCA-205ENST00000505964 LRRC7Q96NW7 1537 aa16.75■□□□□ 0.27
SGCA-205ENST00000505964 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
SGCA-205ENST00000505964 SYNMO15061 1565 aa16.74■□□□□ 0.27
SGCA-205ENST00000505964 ZC3H13Q5T200 1668 aaKnown RBP16.74■□□□□ 0.27
SGCA-205ENST00000505964 UBR1Q8IWV7 1749 aa16.72■□□□□ 0.27
SGCA-205ENST00000505964 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
SGCA-205ENST00000505964 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
SGCA-205ENST00000505964 ABCC3O15438 1527 aa16.7■□□□□ 0.26
SGCA-205ENST00000505964 IQGAP3Q86VI3 1631 aa16.68■□□□□ 0.26
SGCA-205ENST00000505964 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
SGCA-205ENST00000505964 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
SGCA-205ENST00000505964 RGS17Q9UGC6 210 aaPredicted RBP16.67■□□□□ 0.26
SGCA-205ENST00000505964 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
SGCA-205ENST00000505964 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
SGCA-205ENST00000505964 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
SGCA-205ENST00000505964 NUP155O75694 1391 aa16.64■□□□□ 0.25
SGCA-205ENST00000505964 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
SGCA-205ENST00000505964 LTKP29376 864 aa16.61■□□□□ 0.25
SGCA-205ENST00000505964 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
SGCA-205ENST00000505964 ZEB1P37275 1124 aaPredicted RBP16.6■□□□□ 0.25
SGCA-205ENST00000505964 TET3O43151 1660 aa16.59■□□□□ 0.25
SGCA-205ENST00000505964 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms