RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 FAM135AQ9P2D6 1515 aa35.06■■■■□ 3.2
SUDS3P1-201ENST00000505831 CEP170BQ9Y4F5 1589 aaPredicted RBP35.04■■■■□ 3.2
SUDS3P1-201ENST00000505831 KDM5DQ9BY66 1539 aa35.01■■■■□ 3.19
SUDS3P1-201ENST00000505831 PLA2R1Q13018 1463 aa34.97■■■■□ 3.19
SUDS3P1-201ENST00000505831 LTBP4Q8N2S1 1624 aa34.97■■■■□ 3.19
SUDS3P1-201ENST00000505831 RNF17Q9BXT8 1623 aaKnown RBP34.96■■■■□ 3.19
SUDS3P1-201ENST00000505831 PZPP20742 1482 aa34.95■■■■□ 3.19
SUDS3P1-201ENST00000505831 DNMT1P26358 1616 aaKnown RBP34.95■■■■□ 3.18
SUDS3P1-201ENST00000505831 EIF2AK4Q9P2K8 1649 aaKnown RBP34.93■■■■□ 3.18
SUDS3P1-201ENST00000505831 A2ML1A8K2U0 1454 aa34.93■■■■□ 3.18
SUDS3P1-201ENST00000505831 TCOF1Q13428 1488 aaKnown RBP34.93■■■■□ 3.18
SUDS3P1-201ENST00000505831 NCKAP5LQ9HCH0 1330 aa34.93■■■■□ 3.18
SUDS3P1-201ENST00000505831 WASHC2CQ9Y4E1 1318 aa34.93■■■■□ 3.18
SUDS3P1-201ENST00000505831 FBXO31Q5XUX0 539 aaPredicted RBP34.93■■■■□ 3.18
SUDS3P1-201ENST00000505831 CROCC2H7BZ55 1655 aa34.89■■■■□ 3.18
SUDS3P1-201ENST00000505831 PKD2Q13563 968 aa34.89■■■■□ 3.18
SUDS3P1-201ENST00000505831 PTPN23Q9H3S7 1636 aa34.88■■■■□ 3.17
SUDS3P1-201ENST00000505831 APLP2Q06481 763 aa34.87■■■■□ 3.17
SUDS3P1-201ENST00000505831 TNRQ92752 1358 aa34.87■■■■□ 3.17
SUDS3P1-201ENST00000505831 ZC3H13Q5T200 1668 aaKnown RBP34.86■■■■□ 3.17
SUDS3P1-201ENST00000505831 CFAP65Q6ZU64 1925 aaKnown RBP34.86■■■■□ 3.17
SUDS3P1-201ENST00000505831 MROH1Q8NDA8 1641 aa34.85■■■■□ 3.17
SUDS3P1-201ENST00000505831 ABCC5O15440 1437 aa34.82■■■■□ 3.17
SUDS3P1-201ENST00000505831 ABCC3O15438 1527 aa34.82■■■■□ 3.16
SUDS3P1-201ENST00000505831 DUOX2Q9NRD8 1548 aa34.82■■■■□ 3.16
SUDS3P1-201ENST00000505831 POLR1AO95602 1720 aaPredicted RBP34.82■■■■□ 3.16
SUDS3P1-201ENST00000505831 IQSEC2Q5JU85 1478 aa34.8■■■■□ 3.16
SUDS3P1-201ENST00000505831 SHANK2Q9UPX8 1470 aa34.8■■■■□ 3.16
SUDS3P1-201ENST00000505831 CEP152O94986 1710 aa34.78■■■■□ 3.16
SUDS3P1-201ENST00000505831 FGD6Q6ZV73 1430 aa34.77■■■■□ 3.16
SUDS3P1-201ENST00000505831 NLRP1Q9C000 1473 aa34.76■■■■□ 3.15
SUDS3P1-201ENST00000505831 SPATA31D1Q6ZQQ2 1576 aa34.73■■■■□ 3.15
SUDS3P1-201ENST00000505831 ZNF335Q9H4Z2 1342 aaPredicted RBP34.73■■■■□ 3.15
SUDS3P1-201ENST00000505831 DAPK1P53355 1430 aa34.72■■■■□ 3.15
SUDS3P1-201ENST00000505831 NEURL4Q96JN8 1562 aa34.72■■■■□ 3.15
SUDS3P1-201ENST00000505831 KIF15Q9NS87 1388 aa34.71■■■■□ 3.15
SUDS3P1-201ENST00000505831 ERBINQ96RT1 1412 aa34.68■■■■□ 3.14
SUDS3P1-201ENST00000505831 UGGT1Q9NYU2 1555 aa34.68■■■■□ 3.14
SUDS3P1-201ENST00000505831 DEPDC5O75140 1603 aa34.67■■■■□ 3.14
SUDS3P1-201ENST00000505831 THEMISQ8N1K5 641 aaPredicted RBP34.67■■■■□ 3.14
SUDS3P1-201ENST00000505831 PRDM15P57071 1507 aaPredicted RBP34.66■■■■□ 3.14
SUDS3P1-201ENST00000505831 RRP7BPQ9NSQ0 103 aa34.66■■■■□ 3.14
SUDS3P1-201ENST00000505831 ERVK-7P63135 1459 aa34.65■■■■□ 3.14
SUDS3P1-201ENST00000505831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.64■■■■□ 3.14
SUDS3P1-201ENST00000505831 ANKLE2Q86XL3 938 aa34.6■■■■□ 3.13
SUDS3P1-201ENST00000505831 ARHGAP31Q2M1Z3 1444 aa34.6■■■■□ 3.13
SUDS3P1-201ENST00000505831 MED14O60244 1454 aa34.58■■■■□ 3.13
SUDS3P1-201ENST00000505831 UBR1Q8IWV7 1749 aa34.58■■■■□ 3.13
SUDS3P1-201ENST00000505831 ANKRD30AQ9BXX3 1397 aa34.56■■■■□ 3.12
SUDS3P1-201ENST00000505831 CHIC2Q9UKJ5 165 aa34.54■■■■□ 3.12
SUDS3P1-201ENST00000505831 VWDEQ8N2E2 1590 aa34.52■■■■□ 3.12
SUDS3P1-201ENST00000505831 ADGRL2O95490 1459 aa34.52■■■■□ 3.12
SUDS3P1-201ENST00000505831 IQGAP1P46940 1657 aa34.5■■■■□ 3.11
SUDS3P1-201ENST00000505831 NPHP4O75161 1426 aaPredicted RBP34.49■■■■□ 3.11
SUDS3P1-201ENST00000505831 CPS1P31327 1500 aa34.47■■■■□ 3.11
SUDS3P1-201ENST00000505831 LMTK2Q8IWU2 1503 aa34.47■■■■□ 3.11
SUDS3P1-201ENST00000505831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.47■■■■□ 3.11
SUDS3P1-201ENST00000505831 KANK1Q14678 1352 aa34.44■■■■□ 3.1
SUDS3P1-201ENST00000505831 STRCP1A6NGW2 1772 aa34.42■■■■□ 3.1
SUDS3P1-201ENST00000505831 UBAP1LF5GYI3 381 aa34.42■■■■□ 3.1
SUDS3P1-201ENST00000505831 FAM50AQ14320 339 aaKnown RBP34.41■■■■□ 3.1
SUDS3P1-201ENST00000505831 PIK3C2BO00750 1634 aa34.41■■■■□ 3.1
SUDS3P1-201ENST00000505831 ARHGAP23Q9P227 1491 aa34.4■■■■□ 3.1
SUDS3P1-201ENST00000505831 SLIT1O75093 1534 aa34.4■■■■□ 3.1
SUDS3P1-201ENST00000505831 KDM5AP29375 1690 aaKnown RBP34.39■■■■□ 3.1
SUDS3P1-201ENST00000505831 EFCAB6Q5THR3 1501 aa34.34■■■■□ 3.09
SUDS3P1-201ENST00000505831 SCAF11Q99590 1463 aaKnown RBP34.33■■■■□ 3.09
SUDS3P1-201ENST00000505831 LTKP29376 864 aa34.33■■■■□ 3.09
SUDS3P1-201ENST00000505831 SYNMO15061 1565 aa34.32■■■■□ 3.09
SUDS3P1-201ENST00000505831 ANKRD50Q9ULJ7 1429 aa34.32■■■■□ 3.08
SUDS3P1-201ENST00000505831 NOS1P29475 1434 aa34.3■■■■□ 3.08
SUDS3P1-201ENST00000505831 IDI1Q13907 227 aa34.29■■■■□ 3.08
SUDS3P1-201ENST00000505831 TXNDC2Q86VQ3 553 aa34.28■■■■□ 3.08
SUDS3P1-201ENST00000505831 TMEM2Q9UHN6 1383 aa34.24■■■■□ 3.07
SUDS3P1-201ENST00000505831 TET3O43151 1660 aa34.24■■■■□ 3.07
SUDS3P1-201ENST00000505831 ALKQ9UM73 1620 aa34.23■■■■□ 3.07
SUDS3P1-201ENST00000505831 TOM1O60784 492 aa34.23■■■■□ 3.07
SUDS3P1-201ENST00000505831 LRRC7Q96NW7 1537 aa34.22■■■■□ 3.07
SUDS3P1-201ENST00000505831 UNC13BO14795 1591 aa34.22■■■■□ 3.07
SUDS3P1-201ENST00000505831 DISP3Q9P2K9 1392 aa34.22■■■■□ 3.07
SUDS3P1-201ENST00000505831 GCC2Q8IWJ2 1684 aa34.22■■■■□ 3.07
SUDS3P1-201ENST00000505831 RPRD2Q5VT52 1461 aaKnown RBP34.21■■■■□ 3.07
SUDS3P1-201ENST00000505831 ROCK1Q13464 1354 aa34.21■■■■□ 3.07
SUDS3P1-201ENST00000505831 EID1Q9Y6B2 187 aa34.2■■■■□ 3.07
SUDS3P1-201ENST00000505831 XIRP1Q702N8 1843 aaKnown RBP34.2■■■■□ 3.07
SUDS3P1-201ENST00000505831 MYO5BQ9ULV0 1848 aa34.2■■■■□ 3.07
SUDS3P1-201ENST00000505831 SLC52A1Q9NWF4 448 aa34.17■■■■□ 3.06
SUDS3P1-201ENST00000505831 STAG3Q9UJ98 1225 aa34.17■■■■□ 3.06
SUDS3P1-201ENST00000505831 ADGRB3O60242 1522 aa34.14■■■■□ 3.06
SUDS3P1-201ENST00000505831 PIP4K2BP78356 416 aa34.12■■■■□ 3.05
SUDS3P1-201ENST00000505831 E9PCH4 1651 aa34.12■■■■□ 3.05
SUDS3P1-201ENST00000505831 ILDR2Q71H61 639 aa34.1■■■■□ 3.05
SUDS3P1-201ENST00000505831 IQGAP3Q86VI3 1631 aa34.09■■■■□ 3.05
SUDS3P1-201ENST00000505831 HSPA1LP34931 641 aa34.08■■■■□ 3.05
SUDS3P1-201ENST00000505831 PPARGC1BQ86YN6 1023 aaKnown RBP34.08■■■■□ 3.05
SUDS3P1-201ENST00000505831 SCAF1Q9H7N4 1312 aaKnown RBP34.06■■■■□ 3.04
SUDS3P1-201ENST00000505831 TMEM131LA2VDJ0 1609 aa34.06■■■■□ 3.04
SUDS3P1-201ENST00000505831 ZFYVE9O95405 1425 aa34■■■■□ 3.03
SUDS3P1-201ENST00000505831 ITGAEP38570 1179 aa33.98■■■■□ 3.03
SUDS3P1-201ENST00000505831 KCNA6P17658 529 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms