RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 RSPH4AQ5TD94 716 aa27.14■■□□□ 1.94
DDR1-257ENST00000505534 POLR1AO95602 1720 aaPredicted RBP27.13■■□□□ 1.93
DDR1-257ENST00000505534 TNRQ92752 1358 aa27.12■■□□□ 1.93
DDR1-257ENST00000505534 FAM135AQ9P2D6 1515 aa27.12■■□□□ 1.93
DDR1-257ENST00000505534 FBXO31Q5XUX0 539 aaPredicted RBP27.11■■□□□ 1.93
DDR1-257ENST00000505534 CCDC141Q6ZP82 1450 aa27.11■■□□□ 1.93
DDR1-257ENST00000505534 PZPP20742 1482 aa27.1■■□□□ 1.93
DDR1-257ENST00000505534 KDM5DQ9BY66 1539 aa27.1■■□□□ 1.93
DDR1-257ENST00000505534 WASHC2CQ9Y4E1 1318 aa27.08■■□□□ 1.93
DDR1-257ENST00000505534 CAMSAP2Q08AD1 1489 aa27.06■■□□□ 1.92
DDR1-257ENST00000505534 NEURL4Q96JN8 1562 aa27.06■■□□□ 1.92
DDR1-257ENST00000505534 CPS1P31327 1500 aa27.06■■□□□ 1.92
DDR1-257ENST00000505534 NCOA2Q15596 1464 aa27.05■■□□□ 1.92
DDR1-257ENST00000505534 ANKLE2Q86XL3 938 aa27.04■■□□□ 1.92
DDR1-257ENST00000505534 TOM1O60784 492 aa27.03■■□□□ 1.92
DDR1-257ENST00000505534 THEMISQ8N1K5 641 aaPredicted RBP27.03■■□□□ 1.92
DDR1-257ENST00000505534 SHANK2Q9UPX8 1470 aa27.03■■□□□ 1.92
DDR1-257ENST00000505534 MIA2Q96PC5 1412 aa27.01■■□□□ 1.91
DDR1-257ENST00000505534 NLRP1Q9C000 1473 aa27■■□□□ 1.91
DDR1-257ENST00000505534 TSPY4P0CV99 314 aa27■■□□□ 1.91
DDR1-257ENST00000505534 TSPY10P0CW01 314 aa27■■□□□ 1.91
DDR1-257ENST00000505534 ARHGEF5Q12774 1597 aa27■■□□□ 1.91
DDR1-257ENST00000505534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.99■■□□□ 1.91
DDR1-257ENST00000505534 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
DDR1-257ENST00000505534 PIP4K2BP78356 416 aa26.98■■□□□ 1.91
DDR1-257ENST00000505534 UGGT1Q9NYU2 1555 aa26.97■■□□□ 1.91
DDR1-257ENST00000505534 HSPA1LP34931 641 aa26.96■■□□□ 1.91
DDR1-257ENST00000505534 DEPDC5O75140 1603 aa26.96■■□□□ 1.91
DDR1-257ENST00000505534 MED14O60244 1454 aa26.95■■□□□ 1.91
DDR1-257ENST00000505534 VWDEQ8N2E2 1590 aa26.94■■□□□ 1.9
DDR1-257ENST00000505534 NPHP4O75161 1426 aaPredicted RBP26.92■■□□□ 1.9
DDR1-257ENST00000505534 RNF17Q9BXT8 1623 aaKnown RBP26.91■■□□□ 1.9
DDR1-257ENST00000505534 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.9
DDR1-257ENST00000505534 IQGAP1P46940 1657 aa26.89■■□□□ 1.89
DDR1-257ENST00000505534 MED1Q15648 1581 aaPredicted RBP26.88■■□□□ 1.89
DDR1-257ENST00000505534 MAST1Q9Y2H9 1570 aa26.88■■□□□ 1.89
DDR1-257ENST00000505534 CFAP65Q6ZU64 1925 aaKnown RBP26.87■■□□□ 1.89
DDR1-257ENST00000505534 ABCC3O15438 1527 aa26.86■■□□□ 1.89
DDR1-257ENST00000505534 EIF2AK4Q9P2K8 1649 aaKnown RBP26.85■■□□□ 1.89
DDR1-257ENST00000505534 LRRC9Q6ZRR7 1453 aa26.85■■□□□ 1.89
DDR1-257ENST00000505534 ALKQ9UM73 1620 aa26.82■■□□□ 1.88
DDR1-257ENST00000505534 STRCP1A6NGW2 1772 aa26.81■■□□□ 1.88
DDR1-257ENST00000505534 ERVK-7P63135 1459 aa26.81■■□□□ 1.88
DDR1-257ENST00000505534 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
DDR1-257ENST00000505534 CEP152O94986 1710 aa26.77■■□□□ 1.88
DDR1-257ENST00000505534 MROH1Q8NDA8 1641 aa26.77■■□□□ 1.88
DDR1-257ENST00000505534 LRRC7Q96NW7 1537 aa26.77■■□□□ 1.88
DDR1-257ENST00000505534 UBR1Q8IWV7 1749 aa26.76■■□□□ 1.88
DDR1-257ENST00000505534 SYNMO15061 1565 aa26.75■■□□□ 1.87
DDR1-257ENST00000505534 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
DDR1-257ENST00000505534 DUOX2Q9NRD8 1548 aa26.73■■□□□ 1.87
DDR1-257ENST00000505534 MYOM3Q5VTT5 1437 aa26.73■■□□□ 1.87
DDR1-257ENST00000505534 KANK4Q5T7N3 995 aaPredicted RBP26.72■■□□□ 1.87
DDR1-257ENST00000505534 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
DDR1-257ENST00000505534 SCAF11Q99590 1463 aaKnown RBP26.7■■□□□ 1.87
DDR1-257ENST00000505534 ARHGAP31Q2M1Z3 1444 aa26.67■■□□□ 1.86
DDR1-257ENST00000505534 SLIT1O75093 1534 aa26.67■■□□□ 1.86
DDR1-257ENST00000505534 TXNDC2Q86VQ3 553 aa26.67■■□□□ 1.86
DDR1-257ENST00000505534 ARHGAP23Q9P227 1491 aa26.67■■□□□ 1.86
DDR1-257ENST00000505534 LTKP29376 864 aa26.66■■□□□ 1.86
DDR1-257ENST00000505534 PRDM15P57071 1507 aaPredicted RBP26.65■■□□□ 1.86
DDR1-257ENST00000505534 KIF15Q9NS87 1388 aa26.64■■□□□ 1.86
DDR1-257ENST00000505534 SENP3Q9H4L4 574 aaPredicted RBP26.63■■□□□ 1.85
DDR1-257ENST00000505534 EID1Q9Y6B2 187 aa26.63■■□□□ 1.85
DDR1-257ENST00000505534 ERBINQ96RT1 1412 aa26.63■■□□□ 1.85
DDR1-257ENST00000505534 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
DDR1-257ENST00000505534 XIRP1Q702N8 1843 aaKnown RBP26.62■■□□□ 1.85
DDR1-257ENST00000505534 CROCC2H7BZ55 1655 aa26.6■■□□□ 1.85
DDR1-257ENST00000505534 RRP7BPQ9NSQ0 103 aa26.6■■□□□ 1.85
DDR1-257ENST00000505534 ABCC5O15440 1437 aa26.58■■□□□ 1.85
DDR1-257ENST00000505534 PIK3C2BO00750 1634 aa26.57■■□□□ 1.84
DDR1-257ENST00000505534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.56■■□□□ 1.84
DDR1-257ENST00000505534 PTPN23Q9H3S7 1636 aa26.55■■□□□ 1.84
DDR1-257ENST00000505534 STAG3Q9UJ98 1225 aa26.55■■□□□ 1.84
DDR1-257ENST00000505534 KANK1Q14678 1352 aa26.55■■□□□ 1.84
DDR1-257ENST00000505534 TMEM2Q9UHN6 1383 aa26.55■■□□□ 1.84
DDR1-257ENST00000505534 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
DDR1-257ENST00000505534 DAPK1P53355 1430 aa26.51■■□□□ 1.83
DDR1-257ENST00000505534 FAM135BQ49AJ0 1406 aa26.49■■□□□ 1.83
DDR1-257ENST00000505534 IDI1Q13907 227 aa26.49■■□□□ 1.83
DDR1-257ENST00000505534 EFCAB6Q5THR3 1501 aa26.49■■□□□ 1.83
DDR1-257ENST00000505534 LMTK2Q8IWU2 1503 aa26.49■■□□□ 1.83
DDR1-257ENST00000505534 APLP2Q06481 763 aa26.48■■□□□ 1.83
DDR1-257ENST00000505534 KCNA6P17658 529 aa26.46■■□□□ 1.83
DDR1-257ENST00000505534 RGS17Q9UGC6 210 aaPredicted RBP26.46■■□□□ 1.83
DDR1-257ENST00000505534 ANKRD30AQ9BXX3 1397 aa26.46■■□□□ 1.83
DDR1-257ENST00000505534 TMEM94Q12767 1356 aa26.45■■□□□ 1.82
DDR1-257ENST00000505534 FGD6Q6ZV73 1430 aa26.44■■□□□ 1.82
DDR1-257ENST00000505534 TET3O43151 1660 aa26.44■■□□□ 1.82
DDR1-257ENST00000505534 CHIC2Q9UKJ5 165 aa26.42■■□□□ 1.82
DDR1-257ENST00000505534 PROSER2Q86WR7 435 aaPredicted RBP26.41■■□□□ 1.82
DDR1-257ENST00000505534 SLC26A8Q96RN1 970 aa26.41■■□□□ 1.82
DDR1-257ENST00000505534 NOS1P29475 1434 aa26.4■■□□□ 1.82
DDR1-257ENST00000505534 SLC52A1Q9NWF4 448 aa26.39■■□□□ 1.82
DDR1-257ENST00000505534 ROBO1Q9Y6N7 1651 aa26.38■■□□□ 1.81
DDR1-257ENST00000505534 ADGRB3O60242 1522 aa26.37■■□□□ 1.81
DDR1-257ENST00000505534 NKTRP30414 1462 aaKnown RBP26.35■■□□□ 1.81
DDR1-257ENST00000505534 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
DDR1-257ENST00000505534 RBM33Q96EV2 1170 aaKnown RBP26.33■■□□□ 1.81
DDR1-257ENST00000505534 BCANQ96GW7 911 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms