RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
SNHG4-202ENST00000505522 PLA2R1Q13018 1463 aa19.34■□□□□ 0.69
SNHG4-202ENST00000505522 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
SNHG4-202ENST00000505522 FAM135AQ9P2D6 1515 aa19.32■□□□□ 0.68
SNHG4-202ENST00000505522 A2ML1A8K2U0 1454 aa19.32■□□□□ 0.68
SNHG4-202ENST00000505522 TCOF1Q13428 1488 aaKnown RBP19.32■□□□□ 0.68
SNHG4-202ENST00000505522 PZPP20742 1482 aa19.31■□□□□ 0.68
SNHG4-202ENST00000505522 PKD2Q13563 968 aa19.31■□□□□ 0.68
SNHG4-202ENST00000505522 DNMT1P26358 1616 aaKnown RBP19.31■□□□□ 0.68
SNHG4-202ENST00000505522 MYOM3Q5VTT5 1437 aa19.31■□□□□ 0.68
SNHG4-202ENST00000505522 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
SNHG4-202ENST00000505522 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
SNHG4-202ENST00000505522 TNRQ92752 1358 aa19.3■□□□□ 0.68
SNHG4-202ENST00000505522 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
SNHG4-202ENST00000505522 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.68
SNHG4-202ENST00000505522 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
SNHG4-202ENST00000505522 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
SNHG4-202ENST00000505522 EIF2AK4Q9P2K8 1649 aaKnown RBP19.23■□□□□ 0.67
SNHG4-202ENST00000505522 ABCC3O15438 1527 aa19.22■□□□□ 0.67
SNHG4-202ENST00000505522 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
SNHG4-202ENST00000505522 NEURL4Q96JN8 1562 aa19.21■□□□□ 0.67
SNHG4-202ENST00000505522 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
SNHG4-202ENST00000505522 ZC3H13Q5T200 1668 aaKnown RBP19.2■□□□□ 0.66
SNHG4-202ENST00000505522 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
SNHG4-202ENST00000505522 APLP2Q06481 763 aa19.19■□□□□ 0.66
SNHG4-202ENST00000505522 NLRP1Q9C000 1473 aa19.19■□□□□ 0.66
SNHG4-202ENST00000505522 DUOX2Q9NRD8 1548 aa19.19■□□□□ 0.66
SNHG4-202ENST00000505522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNHG4-202ENST00000505522 ABCC5O15440 1437 aa19.18■□□□□ 0.66
SNHG4-202ENST00000505522 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
SNHG4-202ENST00000505522 SPATA31D1Q6ZQQ2 1576 aa19.17■□□□□ 0.66
SNHG4-202ENST00000505522 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
SNHG4-202ENST00000505522 CEP152O94986 1710 aa19.17■□□□□ 0.66
SNHG4-202ENST00000505522 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
SNHG4-202ENST00000505522 THEMISQ8N1K5 641 aaPredicted RBP19.16■□□□□ 0.66
SNHG4-202ENST00000505522 KIF15Q9NS87 1388 aa19.16■□□□□ 0.66
SNHG4-202ENST00000505522 ERVK-7P63135 1459 aa19.16■□□□□ 0.66
SNHG4-202ENST00000505522 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
SNHG4-202ENST00000505522 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
SNHG4-202ENST00000505522 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.65
SNHG4-202ENST00000505522 DAPK1P53355 1430 aa19.14■□□□□ 0.65
SNHG4-202ENST00000505522 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
SNHG4-202ENST00000505522 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
SNHG4-202ENST00000505522 PRDM15P57071 1507 aaPredicted RBP19.11■□□□□ 0.65
SNHG4-202ENST00000505522 ERBINQ96RT1 1412 aa19.11■□□□□ 0.65
SNHG4-202ENST00000505522 MED14O60244 1454 aa19.1■□□□□ 0.65
SNHG4-202ENST00000505522 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
SNHG4-202ENST00000505522 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
SNHG4-202ENST00000505522 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
SNHG4-202ENST00000505522 VWDEQ8N2E2 1590 aa19.09■□□□□ 0.65
SNHG4-202ENST00000505522 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
SNHG4-202ENST00000505522 CPS1P31327 1500 aa19.08■□□□□ 0.64
SNHG4-202ENST00000505522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.648e-8■■□□□ 13.5
SNHG4-202ENST00000505522 ARHGAP31Q2M1Z3 1444 aa19.07■□□□□ 0.64
SNHG4-202ENST00000505522 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
SNHG4-202ENST00000505522 IQGAP1P46940 1657 aa19.06■□□□□ 0.64
SNHG4-202ENST00000505522 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
SNHG4-202ENST00000505522 ILDR2Q71H61 639 aa19.03■□□□□ 0.64
SNHG4-202ENST00000505522 KANK1Q14678 1352 aa19.01■□□□□ 0.63
SNHG4-202ENST00000505522 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
SNHG4-202ENST00000505522 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
SNHG4-202ENST00000505522 SCAF11Q99590 1463 aaKnown RBP18.99■□□□□ 0.63
SNHG4-202ENST00000505522 ARHGAP23Q9P227 1491 aa18.99■□□□□ 0.63
SNHG4-202ENST00000505522 LTKP29376 864 aa18.99■□□□□ 0.63
SNHG4-202ENST00000505522 PIK3C2BO00750 1634 aa18.99■□□□□ 0.63
SNHG4-202ENST00000505522 SLIT1O75093 1534 aa18.99■□□□□ 0.63
SNHG4-202ENST00000505522 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
SNHG4-202ENST00000505522 PIP4K2BP78356 416 aa18.98■□□□□ 0.63
SNHG4-202ENST00000505522 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
SNHG4-202ENST00000505522 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
SNHG4-202ENST00000505522 TOM1O60784 492 aa18.97■□□□□ 0.63
SNHG4-202ENST00000505522 TXNDC2Q86VQ3 553 aa18.96■□□□□ 0.63
SNHG4-202ENST00000505522 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
SNHG4-202ENST00000505522 LRRC7Q96NW7 1537 aa18.95■□□□□ 0.62
SNHG4-202ENST00000505522 HSPA1LP34931 641 aa18.95■□□□□ 0.62
SNHG4-202ENST00000505522 EFCAB6Q5THR3 1501 aa18.94■□□□□ 0.62
SNHG4-202ENST00000505522 SYNMO15061 1565 aa18.93■□□□□ 0.62
SNHG4-202ENST00000505522 IDI1Q13907 227 aa18.93■□□□□ 0.62
SNHG4-202ENST00000505522 TMEM2Q9UHN6 1383 aa18.93■□□□□ 0.62
SNHG4-202ENST00000505522 NOS1P29475 1434 aa18.91■□□□□ 0.62
SNHG4-202ENST00000505522 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
SNHG4-202ENST00000505522 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
SNHG4-202ENST00000505522 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
SNHG4-202ENST00000505522 KDM5AP29375 1690 aaKnown RBP18.9■□□□□ 0.62
SNHG4-202ENST00000505522 SOCS7O14512 581 aa18.87■□□□□ 0.61
SNHG4-202ENST00000505522 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
SNHG4-202ENST00000505522 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
SNHG4-202ENST00000505522 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
SNHG4-202ENST00000505522 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
SNHG4-202ENST00000505522 TET3O43151 1660 aa18.84■□□□□ 0.61
SNHG4-202ENST00000505522 UNC13BO14795 1591 aa18.83■□□□□ 0.6
SNHG4-202ENST00000505522 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
SNHG4-202ENST00000505522 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
SNHG4-202ENST00000505522 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
SNHG4-202ENST00000505522 PPARGC1BQ86YN6 1023 aaKnown RBP18.8■□□□□ 0.6
SNHG4-202ENST00000505522 SLC26A8Q96RN1 970 aa18.8■□□□□ 0.6
SNHG4-202ENST00000505522 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
SNHG4-202ENST00000505522 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
SNHG4-202ENST00000505522 ZFYVE9O95405 1425 aa18.77■□□□□ 0.6
SNHG4-202ENST00000505522 KCNA6P17658 529 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms